BLASTX nr result
ID: Rheum21_contig00035065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00035065
(292 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa Japonica Group] 81 3e-17
ref|NP_001173850.1| Os04g0300175 [Oryza sativa Japonica Group] g... 81 3e-17
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group] 78 6e-17
ref|NP_001175163.1| Os07g0418100 [Oryza sativa Japonica Group] g... 80 7e-17
ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group] g... 79 1e-16
dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group] 79 1e-16
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza... 76 3e-16
gb|ABA95236.1| AT hook motif-containing protein, putative, expre... 76 3e-16
gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group] 76 3e-16
dbj|BAD01692.1| helicase-like protein [Oryza sativa Japonica Gro... 74 1e-15
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ... 74 3e-15
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ... 74 3e-15
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ... 74 3e-15
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 87 3e-15
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 87 3e-15
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 87 3e-15
gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), ... 74 4e-15
ref|XP_003626025.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 73 5e-15
ref|XP_003624099.1| Helicase-like protein [Medicago truncatula] ... 73 5e-15
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 74 6e-15
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa Japonica Group]
Length = 2052
Score = 81.3 bits (199), Expect(2) = 3e-17
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGG RYMVQNYQDAMA+C+ LG+P LF+TFT NSKW EI D L
Sbjct: 589 PSSFTGGRRYMVQNYQDAMAICRVLGSPDLFVTFTCNSKWQEIYDAL 635
Score = 32.3 bits (72), Expect(2) = 3e-17
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 675 LAVLYTVEFQKRGLPH 690
>ref|NP_001173850.1| Os04g0300175 [Oryza sativa Japonica Group]
gi|255675301|dbj|BAH92578.1| Os04g0300175 [Oryza sativa
Japonica Group]
Length = 1718
Score = 81.3 bits (199), Expect(2) = 3e-17
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGG RYMVQNYQDAMA+C+ LG+P LF+TFT NSKW EI D L
Sbjct: 599 PSSFTGGRRYMVQNYQDAMAICRVLGSPDLFVTFTCNSKWQEIYDAL 645
Score = 32.3 bits (72), Expect(2) = 3e-17
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 685 LAVLYTVEFQKRGLPH 700
>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
Length = 1634
Score = 78.2 bits (191), Expect(2) = 6e-17
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGGPRY QNYQDAMA+C+ G P LF+TFT N+ WPEI++ML
Sbjct: 600 PSSFTGGPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNML 646
Score = 34.7 bits (78), Expect(2) = 6e-17
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPHA 291
L+ +YTIEFQKRGLPHA
Sbjct: 686 LAIIYTIEFQKRGLPHA 702
>ref|NP_001175163.1| Os07g0418100 [Oryza sativa Japonica Group]
gi|255677702|dbj|BAH93891.1| Os07g0418100 [Oryza sativa
Japonica Group]
Length = 2266
Score = 79.7 bits (195), Expect(2) = 7e-17
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGG RYMVQNYQDAMA+C+ G+P LF+TFT NSKW EI D L
Sbjct: 506 PSSFTGGRRYMVQNYQDAMAICRVFGSPDLFVTFTCNSKWQEIYDAL 552
Score = 32.7 bits (73), Expect(2) = 7e-17
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 223 KTCYLFLSAVYTIEFQKRGLPH 288
KT L+ +YT+EFQKRGLPH
Sbjct: 586 KTFGPVLAVLYTVEFQKRGLPH 607
>ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group]
gi|113532101|dbj|BAF04484.1| Os01g0244200 [Oryza sativa
Japonica Group]
Length = 2498
Score = 79.3 bits (194), Expect(2) = 1e-16
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGG RYMVQNYQDAMA+C+ G+P LF+TFT NSKW EI D L
Sbjct: 585 PSSFTGGRRYMVQNYQDAMAVCRVFGSPDLFVTFTCNSKWQEIYDAL 631
Score = 32.3 bits (72), Expect(2) = 1e-16
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 671 LAVLYTVEFQKRGLPH 686
>dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group]
Length = 1652
Score = 79.3 bits (194), Expect(2) = 1e-16
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGG RYMVQNYQDAMA+C+ G+P LF+TFT NSKW EI D L
Sbjct: 585 PSSFTGGRRYMVQNYQDAMAVCRVFGSPDLFVTFTCNSKWQEIYDAL 631
Score = 32.3 bits (72), Expect(2) = 1e-16
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 671 LAVLYTVEFQKRGLPH 686
>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 1682
Score = 75.9 bits (185), Expect(2) = 3e-16
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTG PRY QNYQDAMA+C+ G P LF+TFT N+ WPEI++ML
Sbjct: 648 PSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNML 694
Score = 34.7 bits (78), Expect(2) = 3e-16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPHA 291
L+ +YTIEFQKRGLPHA
Sbjct: 734 LAIIYTIEFQKRGLPHA 750
>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1682
Score = 75.9 bits (185), Expect(2) = 3e-16
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTG PRY QNYQDAMA+C+ G P LF+TFT N+ WPEI++ML
Sbjct: 648 PSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNML 694
Score = 34.7 bits (78), Expect(2) = 3e-16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPHA 291
L+ +YTIEFQKRGLPHA
Sbjct: 734 LAIIYTIEFQKRGLPHA 750
>gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]
Length = 1525
Score = 75.9 bits (185), Expect(2) = 3e-16
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTG PRY QNYQDAMA+C+ G P LF+TFT N+ WPEI++ML
Sbjct: 491 PSSFTGSPRYKAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNML 537
Score = 34.7 bits (78), Expect(2) = 3e-16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPHA 291
L+ +YTIEFQKRGLPHA
Sbjct: 577 LAIIYTIEFQKRGLPHA 593
>dbj|BAD01692.1| helicase-like protein [Oryza sativa Japonica Group]
gi|38637630|dbj|BAD03910.1| helicase-like protein [Oryza
sativa Japonica Group]
Length = 1430
Score = 73.6 bits (179), Expect(2) = 1e-15
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
P+SFTGG RYMV NYQDAMA+C+ G P LF+T+T NSKW EI D +
Sbjct: 445 PASFTGGRRYMVMNYQDAMAICRVYGPPDLFVTYTCNSKWQEIADAI 491
Score = 35.0 bits (79), Expect(2) = 1e-15
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 214 QKLKTCYLFLSAVYTIEFQKRGLPH 288
Q++ F++ +YT+EFQKRGLPH
Sbjct: 485 QEIADAIRFITVLYTVEFQKRGLPH 509
>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
gi|355506597|gb|AES87739.1| Helicase-like protein
[Medicago truncatula]
Length = 1641
Score = 74.3 bits (181), Expect(2) = 3e-15
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PS F GG RYM+QNYQDAMA+C +G P LFITFT N KWPE+ D L
Sbjct: 543 PSKFVGGARYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL 589
Score = 32.7 bits (73), Expect(2) = 3e-15
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 244 SAVYTIEFQKRGLPHA 291
+ +YTIEFQKRG+PHA
Sbjct: 629 AVIYTIEFQKRGIPHA 644
>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
gi|355506578|gb|AES87720.1| Helicase-like protein
[Medicago truncatula]
Length = 1585
Score = 74.3 bits (181), Expect(2) = 3e-15
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PS F GG RYM+QNYQDAMA+C +G P LFITFT N KWPE+ D L
Sbjct: 543 PSKFVGGARYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL 589
Score = 32.7 bits (73), Expect(2) = 3e-15
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 244 SAVYTIEFQKRGLPHA 291
+ +YTIEFQKRG+PHA
Sbjct: 629 AVIYTIEFQKRGIPHA 644
>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
gi|355506576|gb|AES87718.1| Helicase-like protein
[Medicago truncatula]
Length = 1262
Score = 74.3 bits (181), Expect(2) = 3e-15
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PS F GG RYM+QNYQDAMA+C +G P LFITFT N KWPE+ D L
Sbjct: 543 PSKFVGGARYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL 589
Score = 32.7 bits (73), Expect(2) = 3e-15
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 244 SAVYTIEFQKRGLPHA 291
+ +YTIEFQKRG+PHA
Sbjct: 629 AVIYTIEFQKRGIPHA 644
>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1558
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGGPRYMVQNYQDAMA+C+ GNP +F+TFTAN KWPEI+ ML
Sbjct: 370 PSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYML 416
>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1531
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGGPRYMVQNYQDAMA+C+ GNP +F+TFTAN KWPEI+ ML
Sbjct: 343 PSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYML 389
>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1558
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSFTGGPRYMVQNYQDAMA+C+ GNP +F+TFTAN KWPEI+ ML
Sbjct: 370 PSSFTGGPRYMVQNYQDAMAICRTFGNPDIFMTFTANPKWPEIQYML 416
>gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa Japonica Group] gi|110288790|gb|ABG65978.1|
hypothetical protein LOC_Os10g12174 [Oryza sativa
Japonica Group]
Length = 1806
Score = 74.3 bits (181), Expect(2) = 4e-15
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
P+SFTGG RYMV NYQDAMA+C+ G+P LF+TFT NSKW EI + +
Sbjct: 498 PASFTGGRRYMVMNYQDAMAICRVYGSPDLFVTFTCNSKWQEIAESI 544
Score = 32.3 bits (72), Expect(2) = 4e-15
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 584 LAVLYTVEFQKRGLPH 599
>ref|XP_003626025.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355501040|gb|AES82243.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1589
Score = 72.8 bits (177), Expect(2) = 5e-15
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSF GG RYM+QNYQDAMA+C +G P LFITFT N KW E+ D L
Sbjct: 548 PSSFVGGARYMIQNYQDAMAICGWVGYPDLFITFTCNHKWAELVDFL 594
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 244 SAVYTIEFQKRGLPHA 291
+ +YTIEFQKRGLPHA
Sbjct: 634 AVIYTIEFQKRGLPHA 649
>ref|XP_003624099.1| Helicase-like protein [Medicago truncatula]
gi|355499114|gb|AES80317.1| Helicase-like protein
[Medicago truncatula]
Length = 1122
Score = 72.8 bits (177), Expect(2) = 5e-15
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
PSSF GG RYM+QNYQDAMA+C +G P LFITFT N KW E+ D L
Sbjct: 81 PSSFVGGARYMIQNYQDAMAICGWVGYPDLFITFTCNHKWAELVDFL 127
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 244 SAVYTIEFQKRGLPHA 291
+ +YTIEFQKRGLPHA
Sbjct: 167 AVIYTIEFQKRGLPHA 182
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa Japonica Group]
gi|77549546|gb|ABA92343.1| AT hook motif-containing
protein, putative [Oryza sativa Japonica Group]
Length = 2157
Score = 73.6 bits (179), Expect(2) = 6e-15
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 93 PSSFTGGPRYMVQNYQDAMALCQALGNPSLFITFTANSKWPEIEDML 233
P+SFTGG RYMV NYQDAMA+C+ G P LF+T+T NSKW EI D +
Sbjct: 513 PASFTGGRRYMVMNYQDAMAICRVYGPPDLFVTYTCNSKWQEIADAI 559
Score = 32.3 bits (72), Expect(2) = 6e-15
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 241 LSAVYTIEFQKRGLPH 288
L+ +YT+EFQKRGLPH
Sbjct: 599 LAVLYTVEFQKRGLPH 614