BLASTX nr result

ID: Rheum21_contig00034873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00034873
         (317 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607616.1| FAR1-related protein [Medicago truncatula] g...    58   1e-06
ref|XP_003561190.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    57   3e-06
ref|XP_003623531.1| FAR1-related protein [Medicago truncatula] g...    57   3e-06

>ref|XP_003607616.1| FAR1-related protein [Medicago truncatula]
           gi|355508671|gb|AES89813.1| FAR1-related protein
           [Medicago truncatula]
          Length = 154

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +2

Query: 131 ECVTPVCNDDLKPYVGQLFHTLEHAIQFYHTYAQACGFDVRVGSTKKSNDRSNIIIWKYL 310
           ECV P C+D+LKP +GQ+F TL+   + Y  YA + GF VR  S+  + D++ +  WKY 
Sbjct: 16  ECV-PNCDDELKPKIGQVFDTLQEGKKIYEKYALSIGFSVR--SSSSTIDKNGVKRWKYF 72

Query: 311 VC 316
           VC
Sbjct: 73  VC 74


>ref|XP_003561190.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 944

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = +2

Query: 113 SPGNNTECVTPVCNDDLKPYVGQLFHTLEHAIQFYHTYAQACGFDVRVGSTKKSNDRSNI 292
           SP   + C TP C+++LKP VG  F  +E   +FY  YA   GF VR+G  K++ D  N+
Sbjct: 84  SPAQASSC-TPECDENLKPAVGMAFDNMEEVEEFYKAYAHNVGFSVRIGQ-KRTVD--NV 139

Query: 293 IIWKYLVC 316
           ++W+  +C
Sbjct: 140 VVWRRFLC 147


>ref|XP_003623531.1| FAR1-related protein [Medicago truncatula]
           gi|355498546|gb|AES79749.1| FAR1-related protein
           [Medicago truncatula]
          Length = 645

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +2

Query: 143 PVCNDDLKPYVGQLFHTLEHAIQFYHTYAQACGFDVRVGSTKKSNDRSNIIIWKYLVC 316
           P C+D LKP VGQ+F TL     FY  YA   GF VR  S+ ++ D++ +  WKY VC
Sbjct: 27  PNCDDKLKPKVGQIFDTLAEGKLFYQNYAHNVGFSVR--SSSETTDKNGVKRWKYFVC 82


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