BLASTX nr result
ID: Rheum21_contig00034857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034857
(363 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX95158.1| retrotransposon protein, putative, Ty3-gypsy sub-... 86 7e-15
gb|AAX96752.1| retrotransposon protein, putative, Ty3-gypsy sub-... 86 7e-15
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 86 7e-15
emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group] 86 7e-15
ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781... 84 1e-14
emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group] 84 1e-14
ref|XP_004980450.1| PREDICTED: uncharacterized protein LOC101760... 84 2e-14
ref|XP_004959519.1| PREDICTED: uncharacterized protein LOC101775... 84 2e-14
gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subc... 84 2e-14
gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-... 84 2e-14
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 84 3e-14
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc... 84 3e-14
ref|XP_004983356.1| PREDICTED: uncharacterized protein LOC101755... 83 3e-14
ref|XP_004983355.1| PREDICTED: uncharacterized protein LOC101754... 83 3e-14
ref|XP_004983333.1| PREDICTED: uncharacterized protein LOC101780... 83 3e-14
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 83 3e-14
ref|XP_004980447.1| PREDICTED: uncharacterized protein LOC101759... 83 3e-14
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 83 3e-14
ref|XP_004979207.1| PREDICTED: uncharacterized protein LOC101775... 83 3e-14
ref|XP_004973185.1| PREDICTED: uncharacterized protein LOC101760... 83 3e-14
>gb|AAX95158.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77549568|gb|ABA92365.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1182
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR PDET E+QRQ
Sbjct: 600 VFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQ 646
>gb|AAX96752.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1222
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR PDET E+QRQ
Sbjct: 600 VFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQ 646
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FPEELP+GLPP+RGIEHQIDL+PGASLPNR AYR PDE E+QRQ
Sbjct: 634 VFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNPDEAKEIQRQ 680
>emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group]
Length = 625
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR PDET E+QRQ
Sbjct: 396 VFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQ 442
>ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781709 [Setaria italica]
Length = 1055
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = -2
Query: 182 PTRSPNC*RRSQYLFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
P N + + +FP E+P GLPPLRGIEHQIDL+PGA+LPNRAAYR P+ET E+QRQ
Sbjct: 679 PPAITNILQEYEDIFPAEIPPGLPPLRGIEHQIDLIPGATLPNRAAYRTNPEETKEIQRQ 738
>emb|CAE02904.3| OSJNBb0045P24.9 [Oryza sativa Japonica Group]
Length = 1361
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = -2
Query: 167 NC*RRSQYLFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
N ++ + +FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR PDET E+Q+Q
Sbjct: 737 NLLQKYEDVFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQQQ 791
>ref|XP_004980450.1| PREDICTED: uncharacterized protein LOC101760928 [Setaria italica]
Length = 1090
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPPLRGIEHQIDL+PGA+LPNRAAYR P+ET E+QRQ
Sbjct: 397 IFPAEIPPGLPPLRGIEHQIDLIPGATLPNRAAYRTNPEETKEIQRQ 443
>ref|XP_004959519.1| PREDICTED: uncharacterized protein LOC101775623 [Setaria italica]
Length = 911
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPPLRGIEHQIDL+PGA+LPNRAAYR P+ET E+QRQ
Sbjct: 273 IFPAEIPPGLPPLRGIEHQIDLIPGATLPNRAAYRTNPEETKEIQRQ 319
>gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1211
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR P+ET E+QRQ
Sbjct: 576 VFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQ 622
>gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1223
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR P+ET E+QRQ
Sbjct: 560 VFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQ 606
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P+GLPP+RGIEHQIDL+PGASLPNRA YR P+ET E+QRQ
Sbjct: 694 VFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQ 740
>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP E+P GLPP+RGIEHQIDL+PGASLPNRAAYR P+ET E+QRQ
Sbjct: 540 VFPAEIPLGLPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQ 586
>ref|XP_004983356.1| PREDICTED: uncharacterized protein LOC101755676, partial [Setaria
italica]
Length = 425
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 230 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 276
>ref|XP_004983355.1| PREDICTED: uncharacterized protein LOC101754866, partial [Setaria
italica]
Length = 456
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 230 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 276
>ref|XP_004983333.1| PREDICTED: uncharacterized protein LOC101780524, partial [Setaria
italica]
Length = 456
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 230 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 276
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 148 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 194
>ref|XP_004980447.1| PREDICTED: uncharacterized protein LOC101759287, partial [Setaria
italica]
Length = 551
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 230 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 276
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 173 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 219
>ref|XP_004979207.1| PREDICTED: uncharacterized protein LOC101775230, partial [Setaria
italica]
Length = 421
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 195 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 241
>ref|XP_004973185.1| PREDICTED: uncharacterized protein LOC101760453, partial [Setaria
italica]
Length = 456
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2
Query: 143 LFPEELPQGLPPLRGIEHQIDLVPGASLPNRAAYRAGPDETNELQRQ 3
+FP++LP GLPPLRGIEHQIDL+PGA LPNRA YR PDET E+QRQ
Sbjct: 230 VFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPYRTNPDETKEIQRQ 276