BLASTX nr result
ID: Rheum21_contig00034849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034849
(326 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 97 3e-18
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 93 4e-17
gb|ABA27027.1| TO70-3 [Taraxacum officinale] 88 1e-15
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 88 1e-15
emb|CAN67251.1| hypothetical protein VITISV_026553 [Vitis vinifera] 82 1e-13
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu] 81 1e-13
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 80 2e-13
emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera] 79 6e-13
emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera] 79 6e-13
emb|CAN69792.1| hypothetical protein VITISV_044000 [Vitis vinifera] 79 6e-13
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana] 79 8e-13
emb|CAN78921.1| hypothetical protein VITISV_011350 [Vitis vinifera] 79 8e-13
emb|CAN83395.1| hypothetical protein VITISV_021697 [Vitis vinifera] 79 8e-13
emb|CAN69665.1| hypothetical protein VITISV_013632 [Vitis vinifera] 79 8e-13
emb|CAN71493.1| hypothetical protein VITISV_011662 [Vitis vinifera] 79 8e-13
emb|CAN76228.1| hypothetical protein VITISV_013950 [Vitis vinifera] 79 8e-13
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 78 1e-12
emb|CAN62410.1| hypothetical protein VITISV_018838 [Vitis vinifera] 78 1e-12
emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera] 78 1e-12
emb|CAN78857.1| hypothetical protein VITISV_009011 [Vitis vinifera] 78 1e-12
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/105 (43%), Positives = 63/105 (60%)
Frame = -1
Query: 317 NDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDP 138
ND+ + LD QQ ++R Y K VR R F GD+VL +V NTR+P
Sbjct: 1759 NDEQICLSLDLLEERREGAAQKVAQCQQRVMRYYNKNVRVRQFRAGDWVLRRVNQNTRNP 1818
Query: 137 TEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
G LGP WEGPYRVI ++G G+YKL DG+++ R+WNA +L++
Sbjct: 1819 NHGALGPKWEGPYRVIRATGPGAYKLAYQDGRDVKRSWNAEHLKK 1863
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = -1
Query: 242 YQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYK 63
YQQ+L ++Y K V+ R GD VL KV+ R+P GKLG NWEGPYR+ + +G G+Y+
Sbjct: 1024 YQQKLKQAYDKGVKSRPLVPGDLVLRKVVGTARNPAWGKLGTNWEGPYRITSVAGIGAYR 1083
Query: 62 LEGMDGKEIPRTWNASNLRR 3
LE +DG+ + R WN +NLRR
Sbjct: 1084 LEDLDGRVVHRPWNVNNLRR 1103
>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
Length = 97
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = -1
Query: 242 YQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYK 63
+QQ + SY K +R R F +GD VL K NT+DP +GKL P WEGPY + + +G G Y
Sbjct: 20 HQQRIANSYNKNIRIRRFQIGDLVLRKTFQNTKDPADGKLAPKWEGPYVINSKAGKGVYW 79
Query: 62 LEGMDGKEIPRTWNASNL 9
L M+G +PR+WNA +L
Sbjct: 80 LADMEGTLLPRSWNAIHL 97
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/105 (43%), Positives = 58/105 (55%)
Frame = -1
Query: 317 NDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDP 138
NDQ L LD YQQ + Y K+V++R FA GD VL KV NT +
Sbjct: 1680 NDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQ 1739
Query: 137 TEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
GKLG +WEGPY + G Y+L MDG IPR+WN++NL+R
Sbjct: 1740 DAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKR 1784
>emb|CAN67251.1| hypothetical protein VITISV_026553 [Vitis vinifera]
Length = 931
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/101 (43%), Positives = 53/101 (52%)
Frame = -1
Query: 305 LERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGK 126
L R LD YQQ Y ++VRHRSF G VL KV NT + GK
Sbjct: 828 LGRNLDWADEVRESAAIRMADYQQMASAHYNRKVRHRSFKNGTLVLRKVFENTTERGTGK 887
Query: 125 LGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
NWEGPY V SS SG+Y L+ +DG + R WN SNL++
Sbjct: 888 FQANWEGPYIVSKSSQSGAYHLQKLDGTPLLRPWNVSNLKQ 928
>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
Length = 1542
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = -1
Query: 227 VRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMD 48
V + K +R R F D+VL KV NTRDP G LGP WEGPYRVI ++G G+YKL D
Sbjct: 1465 VEAANKNLRVRQFRARDWVLGKVNQNTRDPNHGALGPKWEGPYRVIRATGPGAYKLAYPD 1524
Query: 47 GKEIPRTWNASNLRR 3
G+++ R+ NA +L++
Sbjct: 1525 GRDVKRSRNAEHLKK 1539
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 80.5 bits (197), Expect = 2e-13
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -1
Query: 182 GDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
GD+VL KV NTR+P G LGP WEGPYRVI ++G G+YKL DG+++ R+WNA +L++
Sbjct: 1027 GDWVLRKVNQNTRNPNHGALGPKWEGPYRVIRATGPGAYKLACQDGRDVKRSWNAEHLKK 1086
>emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]
Length = 973
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/101 (42%), Positives = 52/101 (51%)
Frame = -1
Query: 305 LERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGK 126
L R LD YQQ Y ++VR RSF G VL KV NT + GK
Sbjct: 870 LGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRSFKNGTLVLRKVFENTAETGAGK 929
Query: 125 LGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
NWEGPY V SS SG+Y L+ +DG + R WN SNL++
Sbjct: 930 FQANWEGPYIVSKSSESGAYHLQKLDGTPLLRPWNVSNLKQ 970
>emb|CAN66183.1| hypothetical protein VITISV_025183 [Vitis vinifera]
Length = 987
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/107 (41%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = -1
Query: 317 NDQALE--RGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTR 144
ND + E R LD YQQ Y ++V+ RSF G VL KV NT
Sbjct: 878 NDASTELGRNLDWTDEVRESAAIRMANYQQRASAHYNRKVKPRSFKNGTLVLRKVFENTA 937
Query: 143 DPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V +S SG+Y L+ +DG + RTWN SNL++
Sbjct: 938 EVGAGKFQANWEGPYIVSKASESGAYHLQKLDGTPLLRTWNVSNLKQ 984
>emb|CAN69792.1| hypothetical protein VITISV_044000 [Vitis vinifera]
Length = 978
Score = 79.0 bits (193), Expect = 6e-13
Identities = 44/108 (40%), Positives = 54/108 (50%)
Frame = -1
Query: 326 QGGNDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANT 147
Q D L R LD YQQ Y ++VR RSF G VL KV NT
Sbjct: 868 QDDADAELGRNLDWADEVRESVSIRMTDYQQRASAHYNRKVRPRSFKNGMLVLRKVFENT 927
Query: 146 RDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V +S SG+Y L+ +DG + R WN SNL++
Sbjct: 928 TETGAGKFQANWEGPYIVSKASESGAYHLQKLDGTPLLRPWNVSNLKQ 975
>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = -1
Query: 233 ELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYKLEG 54
E+ R Y VR R F GD VL KV NT +P GKLG NWEGPY + Y+L
Sbjct: 676 EMARHYNSNVRQRRFHEGDRVLQKVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELAD 735
Query: 53 MDGKEIPRTWNASNLRR 3
+ GK +PR+WNA +LR+
Sbjct: 736 LSGKAVPRSWNAMHLRK 752
>emb|CAN78921.1| hypothetical protein VITISV_011350 [Vitis vinifera]
Length = 1000
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/108 (38%), Positives = 54/108 (50%)
Frame = -1
Query: 326 QGGNDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANT 147
Q + L R LD YQQ Y ++VR RSF G VL KV NT
Sbjct: 890 QSDTNMELGRNLDWTDEVRESAAIRMVDYQQRASAHYNRKVRPRSFKNGTLVLRKVFENT 949
Query: 146 RDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V +S +G+Y L+ +DG + R WN SNL++
Sbjct: 950 TEMGAGKFQANWEGPYIVSKASNNGAYHLQKLDGTPLLRPWNVSNLKQ 997
>emb|CAN83395.1| hypothetical protein VITISV_021697 [Vitis vinifera]
Length = 996
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/108 (39%), Positives = 54/108 (50%)
Frame = -1
Query: 326 QGGNDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANT 147
Q + L R LD YQQ Y ++VR RSF G VL KV NT
Sbjct: 886 QSDANMELGRNLDWTDEVRESAAIRMTDYQQRASAHYNRKVRPRSFKNGTLVLRKVFENT 945
Query: 146 RDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V +S +GSY L+ +DG + R WN SNL++
Sbjct: 946 TEVGVGKFQANWEGPYIVSKASSNGSYHLQKLDGTPLLRPWNVSNLKQ 993
>emb|CAN69665.1| hypothetical protein VITISV_013632 [Vitis vinifera]
Length = 872
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = -1
Query: 326 QGGNDQALERG--LDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLA 153
+G ND+++E G LD YQQ Y ++ R R F +G FVL KV
Sbjct: 760 RGQNDESMELGKNLDWPNDVRENVSIRMANYQQRATTHYNRKARPRVFKIGTFVLKKVFE 819
Query: 152 NTRDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
NT + GK NWEGPY + + SG+Y L+ ++G + R WN SN+++
Sbjct: 820 NTAEKGAGKFQENWEGPYIISKAGESGAYHLQKLEGTLLLRPWNVSNIKQ 869
>emb|CAN71493.1| hypothetical protein VITISV_011662 [Vitis vinifera]
Length = 954
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = -1
Query: 317 NDQALE--RGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTR 144
ND +E R LD YQQ Y ++VR RSF G VL KV NT
Sbjct: 845 NDANIELGRNLDWADEVRESAAIRMANYQQRASAHYNRKVRPRSFKNGTLVLRKVFENTA 904
Query: 143 DPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V SS +G+Y L+ +DG I R WN SNL++
Sbjct: 905 EMGAGKFQANWEGPYIVSKSSENGAYHLQKLDGTPILRPWNVSNLKQ 951
>emb|CAN76228.1| hypothetical protein VITISV_013950 [Vitis vinifera]
Length = 912
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/101 (41%), Positives = 52/101 (51%)
Frame = -1
Query: 305 LERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGK 126
LER LD YQQ V Y ++ R RSF G VL KV NT + GK
Sbjct: 809 LERNLDWTDEVRETASIRMADYQQRAVAHYNRKARPRSFKNGTLVLRKVFENTTETGAGK 868
Query: 125 LGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
NWEGPY V +S SG+Y L+ +D + R WN SNL++
Sbjct: 869 FQANWEGPYIVSKTSESGAYXLQKLDXTPLLRPWNVSNLKQ 909
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/105 (39%), Positives = 54/105 (51%)
Frame = -1
Query: 317 NDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDP 138
ND+ + LD YQ + Y ++V +R F VGD VL KV NT +
Sbjct: 1731 NDRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEI 1790
Query: 137 TEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
GKLG NWEG Y+V G Y+L M G +PRTWN+ +L+R
Sbjct: 1791 NAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKR 1835
>emb|CAN62410.1| hypothetical protein VITISV_018838 [Vitis vinifera]
Length = 890
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = -1
Query: 242 YQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPTEGKLGPNWEGPYRVIASSGSGSYK 63
YQQ Y ++VR RSF G VL KV NT + GK NWEGPY + SS +G Y
Sbjct: 808 YQQRASAHYNRKVRPRSFKNGTLVLRKVFENTAEKEAGKFQANWEGPYIISKSSENGVYH 867
Query: 62 LEGMDGKEIPRTWNASNLRR 3
L+ +DG + R WNASNL++
Sbjct: 868 LQNLDGTPLLRPWNASNLKQ 887
>emb|CAN67611.1| hypothetical protein VITISV_011154 [Vitis vinifera]
Length = 880
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/104 (41%), Positives = 53/104 (50%)
Frame = -1
Query: 314 DQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANTRDPT 135
D L R LD YQQ Y ++VR RSF G VL KV NT +
Sbjct: 774 DAELGRNLDWADEVRESAVIRMTDYQQRASAHYNRKVRPRSFKNGMLVLRKVFENTAETG 833
Query: 134 EGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
GK NWEGPY V SS +G+Y L+ +DG + R WN SNL++
Sbjct: 834 VGKFQANWEGPYIVSKSSENGAYHLQKLDGTPLLRPWNVSNLKQ 877
>emb|CAN78857.1| hypothetical protein VITISV_009011 [Vitis vinifera]
Length = 1027
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/108 (38%), Positives = 55/108 (50%)
Frame = -1
Query: 326 QGGNDQALERGLDXXXXXXXXXXXXXXAYQQELVRSYGKRVRHRSFAVGDFVLCKVLANT 147
Q + L R LD YQQ + Y ++V+ RSF G VL KV NT
Sbjct: 917 QNDANMELGRNLDWADEVRESAAIRMADYQQRVSAHYNRKVKPRSFKNGTLVLRKVFENT 976
Query: 146 RDPTEGKLGPNWEGPYRVIASSGSGSYKLEGMDGKEIPRTWNASNLRR 3
+ GK NWEGPY V +S SG+Y L+ +DG + R WN SNL++
Sbjct: 977 TEVGAGKFQANWEGPYIVSKASESGAYHLQKLDGTPLLRPWNVSNLKQ 1024