BLASTX nr result

ID: Rheum21_contig00034837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00034837
         (251 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref...    69   8e-10
ref|XP_004228886.1| PREDICTED: F-box protein CPR30-like [Solanum...    66   4e-09
gb|EOY28893.1| F-box family protein, putative [Theobroma cacao]        65   7e-09
ref|XP_002312730.1| F-box family protein [Populus trichocarpa] g...    65   1e-08
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|5...    65   1e-08
ref|XP_006358141.1| PREDICTED: F-box protein CPR30-like [Solanum...    64   2e-08
gb|EMJ13819.1| hypothetical protein PRUPE_ppa016052mg [Prunus pe...    64   2e-08
ref|XP_006367729.1| PREDICTED: F-box protein CPR30-like [Solanum...    64   2e-08
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    63   4e-08
ref|XP_004299865.1| PREDICTED: F-box/kelch-repeat protein At3g06...    63   5e-08
ref|XP_004299864.1| PREDICTED: F-box/kelch-repeat protein At3g06...    63   5e-08
gb|EMJ07540.1| hypothetical protein PRUPE_ppa017505mg, partial [...    63   5e-08
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    63   5e-08
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   6e-08
gb|EXB82447.1| F-box protein [Morus notabilis]                         62   8e-08
ref|XP_006358449.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   8e-08
gb|ESW19807.1| hypothetical protein PHAVU_006G157000g [Phaseolus...    62   8e-08
ref|XP_006467161.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   1e-07
ref|XP_002300154.1| hypothetical protein POPTR_0001s32580g [Popu...    62   1e-07
ref|XP_004494051.1| PREDICTED: F-box/kelch-repeat protein At3g23...    61   1e-07

>ref|XP_003599631.1| F-box [Medicago truncatula] gi|357458723|ref|XP_003599642.1| F-box
           [Medicago truncatula] gi|355488679|gb|AES69882.1| F-box
           [Medicago truncatula] gi|355488690|gb|AES69893.1| F-box
           [Medicago truncatula]
          Length = 350

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +3

Query: 78  TRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNF 245
           T  + L S  +LP +L P+IL RLPVKSLL+FRCV KSW+SLI DP F + HL  F
Sbjct: 9   TNNVTLTSLPSLPFDLVPEILCRLPVKSLLQFRCVCKSWKSLISDPKFAKKHLHMF 64


>ref|XP_004228886.1| PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
          Length = 393

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +3

Query: 108 NLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKN 242
           ++P E+  DILSRLPVKSLLRFRCVSKS ++LID P F  +HLKN
Sbjct: 3   DIPPEILSDILSRLPVKSLLRFRCVSKSIKTLIDSPEFIEAHLKN 47


>gb|EOY28893.1| F-box family protein, putative [Theobroma cacao]
          Length = 415

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/45 (66%), Positives = 37/45 (82%)
 Frame = +3

Query: 108 NLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKN 242
           NLP +L  DILSRLPVK +LR RCVSK+WRSLI DP+F + HL++
Sbjct: 43  NLPLDLIADILSRLPVKYVLRLRCVSKAWRSLIGDPDFIKLHLRH 87


>ref|XP_002312730.1| F-box family protein [Populus trichocarpa]
           gi|222852550|gb|EEE90097.1| F-box family protein
           [Populus trichocarpa]
          Length = 445

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/48 (62%), Positives = 39/48 (81%)
 Frame = +3

Query: 108 NLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNFKN 251
           NLP EL  +ILSRLP KSL++FRCVSKS++SLI +P F ++HL+  KN
Sbjct: 78  NLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKTHLEKVKN 125


>ref|XP_002328907.1| predicted protein [Populus trichocarpa]
           gi|566212205|ref|XP_006373085.1| hypothetical protein
           POPTR_0017s08560g [Populus trichocarpa]
           gi|550319791|gb|ERP50882.1| hypothetical protein
           POPTR_0017s08560g [Populus trichocarpa]
          Length = 374

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNFK 248
           LP+E+  +ILSRLPVK L+RF+CVSK+WRSLI  P F ++HLK  K
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTK 53


>ref|XP_006358141.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
          Length = 359

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +3

Query: 108 NLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNFKN 251
           +LP E+  D LSRLPV+SLLRF+CVSKSW+ LI +P F R HL + KN
Sbjct: 4   HLPEEIIMDTLSRLPVQSLLRFKCVSKSWKKLIVEPYFTRKHLNHAKN 51


>gb|EMJ13819.1| hypothetical protein PRUPE_ppa016052mg [Prunus persica]
          Length = 453

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/49 (61%), Positives = 37/49 (75%)
 Frame = +3

Query: 90  KLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHL 236
           +L    N P+++ P+ILSRLPVKSL RFRCVSKSW SLI DP+F +  L
Sbjct: 86  QLMGNPNFPSDIIPEILSRLPVKSLCRFRCVSKSWLSLIADPDFVKRQL 134


>ref|XP_006367729.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
          Length = 404

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/45 (66%), Positives = 37/45 (82%)
 Frame = +3

Query: 108 NLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKN 242
           ++P E+  +ILSRLPVKSLLRFRCVSKS ++LID P F  +HLKN
Sbjct: 3   DIPPEVISEILSRLPVKSLLRFRCVSKSIKTLIDSPKFIEAHLKN 47


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = +3

Query: 21  LHPLEQKGPVSSCS*IMKKTRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRS 200
           ++P+++  P+   S + K+  + +      LP EL  +ILSRLPVKSLL+FRCV KSW S
Sbjct: 20  INPMDRTSPLPPSS-VPKQQPMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMS 78

Query: 201 LIDDPNFCRSHL 236
           LI DP F + HL
Sbjct: 79  LISDPYFMKKHL 90


>ref|XP_004299865.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 439

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = +3

Query: 72  KKTRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSH 233
           K  ++  LW  H LP+E+ P+IL  LPVKSL RFRCVSKSW  LI DP F ++H
Sbjct: 12  KADQLTALW--HRLPSEIIPEILLWLPVKSLCRFRCVSKSWLLLILDPKFVKNH 63


>ref|XP_004299864.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform 1
           [Fragaria vesca subsp. vesca]
          Length = 463

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = +3

Query: 72  KKTRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSH 233
           K  ++  LW  H LP+E+ P+IL  LPVKSL RFRCVSKSW  LI DP F ++H
Sbjct: 12  KADQLTALW--HRLPSEIIPEILLWLPVKSLCRFRCVSKSWLLLILDPKFVKNH 63


>gb|EMJ07540.1| hypothetical protein PRUPE_ppa017505mg, partial [Prunus persica]
          Length = 422

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = +3

Query: 69  MKKTRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLK 239
           M K + ++  S ++LP ++   ILSRLPVKSL+RF CVSK WRS++ DP F +S  K
Sbjct: 7   MAKKKKLEKESNNHLPQDIIVHILSRLPVKSLIRFSCVSKRWRSIVTDPEFAKSQFK 63


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1
           [Glycine max]
          Length = 405

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = +3

Query: 21  LHPLEQKGPVSSCS*IMKKTRIIKLWSKHNLPAELWPDILSRLPVKSLLRFRCVSKSWRS 200
           ++P+++  P+   S + K+  + +      LP EL  +ILSRLPVKSLL+FRCV KSW S
Sbjct: 20  INPMDRTSPLPPSS-VQKQQGMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMS 78

Query: 201 LIDDPNFCRSHL 236
           LI DP F + HL
Sbjct: 79  LIYDPYFMKKHL 90


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLK 239
           LP EL   IL RLPVKSLLRF+CVSKSW SLI DP+F +SH +
Sbjct: 18  LPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSHFE 60


>gb|EXB82447.1| F-box protein [Morus notabilis]
          Length = 391

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNFK 248
           LP E+  DIL RLPV  LLR+RCVSK WRSLID P+F + HL + K
Sbjct: 5   LPLEIIVDILYRLPVNDLLRYRCVSKQWRSLIDGPDFIKLHLNHSK 50


>ref|XP_006358449.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 328

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHL 236
           LPAEL  +ILSRLPVKSLL+FRC SKSW +LI  P F ++HL
Sbjct: 8   LPAELVNEILSRLPVKSLLKFRCASKSWFALISSPEFVKTHL 49


>gb|ESW19807.1| hypothetical protein PHAVU_006G157000g [Phaseolus vulgaris]
          Length = 410

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHL 236
           LP EL  +ILSRLPVKSLL+FRCV KSW SLI DP F + HL
Sbjct: 54  LPNELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHL 95


>ref|XP_006467161.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Citrus
           sinensis]
          Length = 376

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +3

Query: 114 PAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLKNFKN 251
           P ++  +ILSRLPVKSL+R RCV KSW +LI DPNF   HLKN  N
Sbjct: 10  PEDITIEILSRLPVKSLIRLRCVCKSWYALIKDPNFISMHLKNDVN 55


>ref|XP_002300154.1| hypothetical protein POPTR_0001s32580g [Populus trichocarpa]
           gi|222847412|gb|EEE84959.1| hypothetical protein
           POPTR_0001s32580g [Populus trichocarpa]
          Length = 372

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLK 239
           LP ++  DIL+ LPVKSLLRF+CV K W SLI DP F +SHLK
Sbjct: 4   LPQDIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLK 46


>ref|XP_004494051.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cicer
           arietinum]
          Length = 390

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 111 LPAELWPDILSRLPVKSLLRFRCVSKSWRSLIDDPNFCRSHLK 239
           LP +L P++LS L VKSLLR RCVSKSWR+LI DP F + HLK
Sbjct: 16  LPDDLIPEVLSLLSVKSLLRLRCVSKSWRALISDPVFVKLHLK 58


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