BLASTX nr result
ID: Rheum21_contig00034825
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034825
(453 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus pe... 159 3e-37
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi... 159 5e-37
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi... 159 5e-37
ref|XP_002307076.2| pentatricopeptide repeat-containing family p... 152 4e-35
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi... 150 2e-34
ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutr... 147 1e-33
gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis] 144 9e-33
gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protei... 143 2e-32
ref|XP_002866898.1| pentatricopeptide repeat-containing protein ... 141 1e-31
ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutr... 140 2e-31
emb|CBI26593.3| unnamed protein product [Vitis vinifera] 139 5e-31
ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Caps... 135 4e-30
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar... 133 2e-29
gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlise... 117 2e-24
ref|XP_004491447.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ... 110 2e-22
ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_004978055.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
>gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
Length = 748
Score = 159 bits (403), Expect = 3e-37
Identities = 79/131 (60%), Positives = 98/131 (74%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL V +GNA+N FIAAKL+SFYA +P S +VF +V KD FLWNSIIK+HFSN DY
Sbjct: 52 HALIVTSGNANNIFIAAKLISFYASLSKPTFSTKVFGSVCPKDTFLWNSIIKTHFSNGDY 111
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
KA+D++ +MR P FT+PMVV++CAEL+ + G +VHGL KLGL GNSAV SS
Sbjct: 112 SKALDFFFQMRALGFAPTQFTLPMVVASCAELMLLEHGNNVHGLALKLGLFSGNSAVGSS 171
Query: 413 LVYLYSKCGRV 445
VY+YSKCGR+
Sbjct: 172 FVYMYSKCGRM 182
>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 159 bits (401), Expect = 5e-37
Identities = 74/131 (56%), Positives = 95/131 (72%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
H+L + TGN++N F A KL++FYA H +P S +F + KDIFLWNSII+SHFSN DY
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A D+Y +MR LP+ FTVPMVVS CAEL+ + G ++HGL KLGL GNSA+ SS
Sbjct: 90 QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149
Query: 413 LVYLYSKCGRV 445
+Y+YSKCG V
Sbjct: 150 FIYMYSKCGHV 160
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/131 (25%), Positives = 63/131 (48%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
H + +N +A L+ Y + R+F +D+ WN++I S+ +
Sbjct: 434 HCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGIL 493
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+ + +M P+ T +V+SACA L D GE +H +++ G N + ++
Sbjct: 494 AEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENG-FESNITIRTA 552
Query: 413 LVYLYSKCGRV 445
L+ +Y+KCG +
Sbjct: 553 LIDMYAKCGEL 563
>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 159 bits (401), Expect = 5e-37
Identities = 74/131 (56%), Positives = 95/131 (72%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
H+L + TGN++N F A KL++FYA H +P S +F + KDIFLWNSII+SHFSN DY
Sbjct: 60 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 119
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A D+Y +MR LP+ FTVPMVVS CAEL+ + G ++HGL KLGL GNSA+ SS
Sbjct: 120 QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 179
Query: 413 LVYLYSKCGRV 445
+Y+YSKCG V
Sbjct: 180 FIYMYSKCGHV 190
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/131 (25%), Positives = 63/131 (48%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
H + +N +A L+ Y + R+F +D+ WN++I S+ +
Sbjct: 464 HCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGIL 523
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+ + +M P+ T +V+SACA L D GE +H +++ G N + ++
Sbjct: 524 AEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENG-FESNITIRTA 582
Query: 413 LVYLYSKCGRV 445
L+ +Y+KCG +
Sbjct: 583 LIDMYAKCGEL 593
>ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550338333|gb|EEE94072.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 744
Score = 152 bits (384), Expect = 4e-35
Identities = 73/129 (56%), Positives = 94/129 (72%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL + TGNA+N FI++KL+S YA +P +S VFD+ + KD FLWNSIIKSHFSN +Y
Sbjct: 53 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 112
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
KA D+Y +MR P+ FT+PM+V+ CAELL + G+ +HGLV K GL NSAV SS
Sbjct: 113 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 172
Query: 413 LVYLYSKCG 439
VY+Y+KCG
Sbjct: 173 FVYMYAKCG 181
Score = 55.1 bits (131), Expect = 9e-06
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +2
Query: 80 ADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTR 259
A+N + + V YA + + +FD + +D+ W +++ + N D +K ++
Sbjct: 164 AENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCE 223
Query: 260 MRLCYC---LPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYS 430
MR ++ T+ AC L G +HGL K G LG + V+SSL+ +YS
Sbjct: 224 MRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTG-LGCSQVVQSSLLSMYS 282
Query: 431 KCGRV 445
KCG V
Sbjct: 283 KCGNV 287
>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 150 bits (379), Expect = 2e-34
Identities = 69/129 (53%), Positives = 94/129 (72%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA + +G ++N FIA+KL+S YA +P S +FD + +D FLWNSIIK+HFSN +Y
Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+D+Y MR LP++FT+PM+V++CAEL + G S+HGLV KLGL G+SAV SS
Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSS 174
Query: 413 LVYLYSKCG 439
VY+YSKCG
Sbjct: 175 FVYMYSKCG 183
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/131 (25%), Positives = 65/131 (49%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
H + +N + L+ Y + R+F + +DI WN++I S+ +
Sbjct: 425 HCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHF 483
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+ Y +M L P++ T+ V+SAC+ L + GE VH + G N ++ ++
Sbjct: 484 AEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYING-GKFEFNLSIATA 542
Query: 413 LVYLYSKCGRV 445
L+ +Y+KCG++
Sbjct: 543 LIDMYAKCGQL 553
>ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutrema salsugineum]
gi|557106078|gb|ESQ46403.1| hypothetical protein
EUTSA_v10000054mg [Eutrema salsugineum]
Length = 779
Score = 147 bits (372), Expect = 1e-33
Identities = 74/131 (56%), Positives = 93/131 (70%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
+AL + GN+DN F+A+KL+S YA +P S +VFD VS +D+FLWNSIIK+HFSN DY
Sbjct: 51 NALIITGGNSDNVFVASKLISSYASFGKPNISSKVFDLVSQRDVFLWNSIIKAHFSNADY 110
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+D++ M L PD+FT PMVVSACAEL DVG VHGLV K G NSA +S
Sbjct: 111 PRALDFFFSMLLSGQSPDHFTAPMVVSACAELSWYDVGSFVHGLVSKHGGFERNSAAGAS 170
Query: 413 LVYLYSKCGRV 445
VY Y+KCGR+
Sbjct: 171 FVYFYAKCGRL 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +2
Query: 86 NPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTRMR 265
N A V FYA R + + VFD + +D+ W +II H N + ++ ++Y +M
Sbjct: 164 NSAAGASFVYFYAKCGRLEDACLVFDEMPERDVVAWTAIISGHVQNGESERGLEYLCKMH 223
Query: 266 LCYC---LPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKC 436
P+ T+ ACA L G +HG K GL N V+SS LY+KC
Sbjct: 224 SVGSDDEKPNPRTLECGFQACANLSALKQGRCLHGFTVKNGLASSN-IVKSSTFSLYTKC 282
Query: 437 G 439
G
Sbjct: 283 G 283
>gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis]
Length = 778
Score = 144 bits (364), Expect = 9e-33
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL + +GN++N FIA+KL+S YA RP S VF ++ KD FLWNS+IK+HFSN D+
Sbjct: 51 HALIITSGNSNNIFIASKLISLYASLNRPTNSTLVFYSIHPKDTFLWNSVIKAHFSNGDF 110
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+ + RMR +P+ FT+PMVV +CA+L+ D G+S HGLV KLGLL G++ SS
Sbjct: 111 QEALYLFLRMRASGFVPNQFTLPMVVGSCADLMLLDCGKSFHGLVLKLGLLSGDNVAGSS 170
Query: 413 LVYLYSKCGRVG 448
VY+Y KCG++G
Sbjct: 171 FVYMYCKCGQMG 182
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/121 (28%), Positives = 65/121 (53%)
Frame = +2
Query: 83 DNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTRM 262
+N +A L+ Y + R+F KD+ WN+II + +++A+ + +M
Sbjct: 469 NNVSVANSLIDMYGKRGELTLAWRMFCRAQ-KDVVTWNTIISCYIHCGQFEEAIALFDKM 527
Query: 263 RLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKCGR 442
P++ T+ MV+S C+ L D GE VH +++ G L N ++ ++LV +Y+KCG+
Sbjct: 528 ISENLYPNSATLAMVLSTCSHLASLDKGEKVHHHIKERG-LEINLSLGTALVDMYAKCGQ 586
Query: 443 V 445
+
Sbjct: 587 L 587
>gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 784
Score = 143 bits (361), Expect = 2e-32
Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 3/135 (2%)
Frame = +2
Query: 53 HALFVATGNA-DNPFIAAKLVSFYALHLRPQTSDRVFDNVS--CKDIFLWNSIIKSHFSN 223
HAL + TGN+ +N FIA+KL+S YA +P S +VFD++S KD FLWNSIIKSHFSN
Sbjct: 53 HALIITTGNSTNNIFIASKLISLYAFFNKPHFSTKVFDSLSIPAKDTFLWNSIIKSHFSN 112
Query: 224 RDYDKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAV 403
+Y ++ +Y+ +MRL P++FT+PMV SACAEL G+ VHGL K GL NSAV
Sbjct: 113 GNYAESFEYHLKMRLHNTPPNDFTIPMVASACAELRWEGCGKYVHGLTLKFGLFAENSAV 172
Query: 404 ESSLVYLYSKCGRVG 448
SS VY+Y+KCG +G
Sbjct: 173 GSSFVYMYAKCGSMG 187
>ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312734|gb|EFH43157.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 742
Score = 141 bits (355), Expect = 1e-31
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
+AL + GN++N F+A+KL+S YA + +P S RVFD V+ +D+FLWNSIIK+HFSN DY
Sbjct: 52 NALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVTRRDVFLWNSIIKAHFSNGDY 111
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+++ ++ M L PD+FT PMVVSACAELL DVG VHG V K G N+AV +S
Sbjct: 112 ARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGAS 171
Query: 413 LVYLYSKCG 439
VY YSKCG
Sbjct: 172 FVYFYSKCG 180
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 86 NPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTRMR 265
N + A V FY+ Q + VFD + +D+ W +II H NR+ ++A+ Y +M
Sbjct: 165 NTAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCKMH 224
Query: 266 LC---YCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKC 436
P+ T+ AC+ L G +HG K GL N V+SS+ LYSK
Sbjct: 225 TVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSN-VVQSSIFSLYSKS 283
Query: 437 G 439
G
Sbjct: 284 G 284
>ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Solanum tuberosum]
Length = 761
Score = 140 bits (354), Expect = 1e-31
Identities = 70/129 (54%), Positives = 93/129 (72%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA + TG+ N +IAAKL+S YA + +S +VFD ++ KD FLWNSIIK++FSN Y
Sbjct: 33 HAFIITTGHTHNVYIAAKLISLYASNNNLISSRKVFDFINFKDPFLWNSIIKAYFSNGKY 92
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
++++ Y+ MR LP+ FT+PMVVSACAEL ++G VHGLV KL L GNSAV +S
Sbjct: 93 TESLELYSSMRGSNALPNQFTIPMVVSACAELGLVEIGMGVHGLVLKLNLFDGNSAVGAS 152
Query: 413 LVYLYSKCG 439
LV++YSKCG
Sbjct: 153 LVFMYSKCG 161
Score = 55.5 bits (132), Expect = 7e-06
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Frame = +2
Query: 86 NPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTRMR 265
N + A LV Y+ + + VFD + +D+ W +IIK + N K ++Y+ M
Sbjct: 146 NSAVGASLVFMYSKCGVMEYASDVFDEIPVRDVVSWTAIIKGYVENGQSGKGLEYFCLM- 204
Query: 266 LC-----YCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYS 430
C P+ T+ AC L G+ HGL K G G V+SS++ +YS
Sbjct: 205 -CKNGEGEVRPNFRTLEGGFQACGNLGALVEGKCFHGLAMKSG-FGCYQVVQSSVLLMYS 262
Query: 431 KCGRV 445
KCG V
Sbjct: 263 KCGSV 267
>ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutrema salsugineum]
gi|557087262|gb|ESQ28114.1| hypothetical protein
EUTSA_v10018157mg [Eutrema salsugineum]
Length = 776
Score = 140 bits (352), Expect = 2e-31
Identities = 71/131 (54%), Positives = 92/131 (70%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
+AL + GN+DN F+A+KL+S YA + +P S VFD+VS +D+FLWNSIIK+HFSN DY
Sbjct: 50 NALTITGGNSDNIFVASKLISSYASYGKPNLSSTVFDSVSRRDVFLWNSIIKAHFSNGDY 109
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+ ++ M L PD+FTVPMVVSACAEL VG VHGL K G + AV +S
Sbjct: 110 PRALGFFFSMLLSCQSPDHFTVPMVVSACAELSWLGVGSFVHGLALKHGGFDRSCAVGAS 169
Query: 413 LVYLYSKCGRV 445
VY Y+KCGR+
Sbjct: 170 FVYFYAKCGRL 180
Score = 55.8 bits (133), Expect = 6e-06
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +2
Query: 53 HALFVATGNADNPF-IAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRD 229
H L + G D + A V FYA R + VFD + +D+ W +II H N +
Sbjct: 151 HGLALKHGGFDRSCAVGASFVYFYAKCGRLEDVCLVFDEMPERDVVAWTAIISGHVQNGE 210
Query: 230 YDKAVDYYTRMRLCYC---LPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSA 400
++ + Y +M P+ T+ ACA L G +HGL K GL N
Sbjct: 211 SERGLKYLCKMHSVGSDGEKPNPRTLECGFQACANLASLKEGRCLHGLSVKNGLDSSN-I 269
Query: 401 VESSLVYLYSK 433
V+SS+ LYSK
Sbjct: 270 VKSSIFSLYSK 280
>emb|CBI26593.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 139 bits (349), Expect = 5e-31
Identities = 63/129 (48%), Positives = 91/129 (70%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA + +G ++N FIA+KL+S YA +P S +FD + +D FLWNSIIK+HFSN +Y
Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+A+D+Y MR LP++FT+PM+V++CAEL + G S+HGLV KLGL GN V+++
Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGNQMVQNA 174
Query: 413 LVYLYSKCG 439
L+ +Y K G
Sbjct: 175 LLSMYCKFG 183
>ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Capsella rubella]
gi|482551872|gb|EOA16065.1| hypothetical protein
CARUB_v10004198mg [Capsella rubella]
Length = 771
Score = 135 bits (341), Expect = 4e-30
Identities = 71/130 (54%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +2
Query: 56 ALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCK--DIFLWNSIIKSHFSNRD 229
AL + GN+DN F+A+KL+S YA H +P S RVFD VS + D+FLWNSIIK+HFSN D
Sbjct: 42 ALIITGGNSDNIFVASKLISSYASHGKPNLSSRVFDLVSSRRRDVFLWNSIIKAHFSNGD 101
Query: 230 YDKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVES 409
Y++ + + M PD+FT PMVVSA AEL DVG +HGLV K G N+AV +
Sbjct: 102 YERTLGIFFSMLFSGHSPDHFTAPMVVSASAELFWFDVGSFLHGLVLKHGRFDRNTAVGA 161
Query: 410 SLVYLYSKCG 439
S VY YSKCG
Sbjct: 162 SFVYFYSKCG 171
>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 133 bits (335), Expect = 2e-29
Identities = 70/129 (54%), Positives = 90/129 (69%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
+AL + G ++N F+A+KL+S YA + +P S RVF V+ +DIFLWNSIIK+HFSN DY
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+++ ++ M L PD+FT PMVVSACAELL VG VHGLV K G N+AV +S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 413 LVYLYSKCG 439
VY YSKCG
Sbjct: 167 FVYFYSKCG 175
>gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlisea aurea]
Length = 409
Score = 117 bits (293), Expect = 2e-24
Identities = 61/129 (47%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA + G+A N FIA+KL+ YA P S ++F +V KD+FLWNSIIK+HFS +Y
Sbjct: 9 HAYTIVKGHAQNRFIASKLILSYASLGHPVCSTKIFVSVHFKDLFLWNSIIKAHFSAGNY 68
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNS-AVES 409
+A++++++MR PD FT+PMVVSA AEL +G +H + K L NS A+ +
Sbjct: 69 AEAIEFFSQMRFLAFSPDEFTLPMVVSASAELGSLFLGMCIHCFIAKANLFYANSAAIGA 128
Query: 410 SLVYLYSKC 436
SLVY+YSKC
Sbjct: 129 SLVYMYSKC 137
>ref|XP_004491447.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like isoform X1 [Cicer arietinum]
gi|502099305|ref|XP_004491448.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like isoform X2 [Cicer arietinum]
Length = 760
Score = 117 bits (292), Expect = 2e-24
Identities = 60/131 (45%), Positives = 83/131 (63%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA+ V TGN+ NPFIAAKL+S Y P +S +F ++ KD FLWNS +K+ FS +
Sbjct: 33 HAVTVTTGNSTNPFIAAKLISLYDTLNHPSSSSTLFHSLPFKDTFLWNSFLKTLFSRSLF 92
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+ + +Y+ MR LP+ FT P+V S+ A LL G ++H L KLGL +SAV SS
Sbjct: 93 PQLLSFYSLMRSSNLLPNQFTFPIVASSYAHLLLLPSGMNLHALASKLGLFPSSSAVGSS 152
Query: 413 LVYLYSKCGRV 445
V LYS+CG++
Sbjct: 153 FVSLYSRCGQM 163
>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 110 bits (274), Expect = 2e-22
Identities = 58/128 (45%), Positives = 79/128 (61%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HA+ V TGN+ NPFIAAKL+S Y P +S +F ++ KD FLWNS +K+ FS Y
Sbjct: 31 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESS 412
+ + +Y+ MR LP++FT PMV S+ A + G ++H L K+G NSAV SS
Sbjct: 91 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 150
Query: 413 LVYLYSKC 436
V LYS+C
Sbjct: 151 FVSLYSRC 158
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/117 (29%), Positives = 65/117 (55%)
Frame = +2
Query: 95 IAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDYDKAVDYYTRMRLCY 274
+ L+ Y + S R+F N S +D+ LWN++I +H + Y++A+ + M +
Sbjct: 452 VTNSLIEMYGKCDKMNVSWRIF-NRSERDVILWNALISAHIHVKHYEEAISLFDIMIMED 510
Query: 275 CLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKCGRV 445
P+ T+ +V+SAC+ L + GE +H + + G N + ++LV +Y+KCG++
Sbjct: 511 QNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKL-NLPLGTALVDMYAKCGQL 566
>ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 108 bits (270), Expect = 7e-22
Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL +G + P AAKLVS Y+ P + F C D FLWNS+++SH D+
Sbjct: 35 HALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDF 94
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNS--AVE 406
D A+ + RMR P FT P+ SA AEL VG SVH K GLL G+ AV
Sbjct: 95 DSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVS 154
Query: 407 SSLVYLYSKCGRVG 448
SSLVY+Y++CG +G
Sbjct: 155 SSLVYMYARCGSLG 168
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/91 (31%), Positives = 54/91 (59%)
Frame = +2
Query: 176 KDIFLWNSIIKSHFSNRDYDKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESV 355
+D+ WN++I S+ + A+ Y +M P++ T+ V+SACA L + GE +
Sbjct: 490 RDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELL 549
Query: 356 HGLVEKLGLLGGNSAVESSLVYLYSKCGRVG 448
H V+ +G L + ++ ++LV +Y+KCG++G
Sbjct: 550 HSYVKNMG-LESDVSISTALVDMYTKCGQLG 579
>ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Oryza brachyantha]
Length = 774
Score = 102 bits (253), Expect = 7e-20
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL V +G + P AAKLVS Y+ RP + F C D FLWNS+++SH D+
Sbjct: 35 HALAVTSGLSSRPDFAAKLVSAYSSAGRPGLAALAFAASPCPDTFLWNSLLRSHHRASDF 94
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNS--AVE 406
+ + RMR P FT P+V SA AEL VG +VH + GLL G+ AV
Sbjct: 95 ASVLSAHRRMRASGARPSRFTAPLVASAAAELGALQVGAAVHACSVRFGLLEGDGSVAVA 154
Query: 407 SSLVYLYSKCGRV 445
SSLV++Y++CG V
Sbjct: 155 SSLVHMYARCGSV 167
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/125 (32%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +2
Query: 83 DNPFIAAKLVSFYALHLRPQTSDRVFDNVSCK-DIFLWNSIIKSHFSNRDYDK-AVDYYT 256
+N +A L+S Y + + + + R+FD + K D+ WN++I S +S+ Y K A+ Y
Sbjct: 459 ENSSVANALISMYGMCGKFELALRLFDLIKTKTDVVTWNALISS-YSHLGYSKDALFLYD 517
Query: 257 RMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKC 436
+M P++ T+ V+SACA L+ + GE +H V+ +G L + ++ ++LV +Y+KC
Sbjct: 518 QMLTEGVKPNSTTLVTVISACANLVALERGELMHSYVKDMG-LECDVSISTALVDMYTKC 576
Query: 437 GRVGV 451
G++ +
Sbjct: 577 GQLHI 581
>ref|XP_004978055.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Setaria italica]
Length = 772
Score = 100 bits (250), Expect = 2e-19
Identities = 59/135 (43%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Frame = +2
Query: 53 HALFVATGNADNPFIAAKLVSFYALHLRPQTSDRVFDNVSCKDIFLWNSIIKSHFSNRDY 232
HAL V +G + P +AAKLVS Y+ RP + F D FLWNS+I++H D+
Sbjct: 32 HALAVTSGLSPRPDVAAKLVSAYSSAGRPGLAALAFSATLRPDAFLWNSLIRAHHCASDF 91
Query: 233 DKAVDYYTRMRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLL---GGNSAV 403
A+ + RM P FT P+ SA AEL VG SVH + GLL GG+ AV
Sbjct: 92 AAALAAHRRMLASGARPSRFTTPLAASAAAELGALGVGASVHAYCVRCGLLVGDGGSVAV 151
Query: 404 ESSLVYLYSKCGRVG 448
SSLVY+Y++CG VG
Sbjct: 152 ASSLVYVYARCGVVG 166
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +2
Query: 83 DNPFIAAKLVSFYALHLRPQTSDRVFDNVSCK-DIFLWNSIIKSHFSNRDYDKAVDYYTR 259
DN +A L+ Y + + ++FD K D+ WN++I S+ + AV Y +
Sbjct: 457 DNLSVANVLIGMYGRCGKFNNARKIFDLAKLKGDVVTWNALISSYAHLGHSNAAVSLYDQ 516
Query: 260 MRLCYCLPDNFTVPMVVSACAELLEADVGESVHGLVEKLGLLGGNSAVESSLVYLYSKCG 439
M P++ T+ V+SACA L+ + GE VH V+++G + ++ ++LV +Y+KCG
Sbjct: 517 MLTEGLKPNSATLITVISACANLVALERGEQVHSYVKEMG-WESDVSISTALVDMYAKCG 575
Query: 440 RVGV 451
++G+
Sbjct: 576 QLGI 579