BLASTX nr result

ID: Rheum21_contig00034570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00034570
         (277 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325438.1| cationic amino acid transporter 3 family pro...    42   1e-06
ref|XP_006405965.1| hypothetical protein EUTSA_v10027685mg [Eutr...    42   3e-06
ref|XP_006283314.1| hypothetical protein CARUB_v10004353mg [Caps...    42   1e-05

>ref|XP_002325438.1| cationic amino acid transporter 3 family protein [Populus
           trichocarpa] gi|222862313|gb|EEE99819.1| cationic amino
           acid transporter 3 family protein [Populus trichocarpa]
          Length = 641

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +3

Query: 57  NVYLLINLEFATWMRVSIWLFLGSLV 134
           N+YLLINL  ATW RVS+WL +G LV
Sbjct: 582 NIYLLINLGAATWTRVSVWLIVGVLV 607



 Score = 35.8 bits (81), Expect(2) = 1e-06
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +1

Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTH 198
           GVL    +GR+ +SLRDAVY+P TH
Sbjct: 604 GVLVYVFYGRKHSSLRDAVYVPATH 628


>ref|XP_006405965.1| hypothetical protein EUTSA_v10027685mg [Eutrema salsugineum]
           gi|557107103|gb|ESQ47418.1| hypothetical protein
           EUTSA_v10027685mg [Eutrema salsugineum]
          Length = 635

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 57  NVYLLINLEFATWMRVSIWLFLGSLVLL 140
           N+YLL+NL  ATW RVS+WL +G LV L
Sbjct: 576 NMYLLVNLGAATWARVSVWLVIGVLVYL 603



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTHWRGL 210
           GVL    +G+R +SL DAVY+PT H  G+
Sbjct: 598 GVLVYLFYGQRHSSLVDAVYVPTAHAHGI 626


>ref|XP_006283314.1| hypothetical protein CARUB_v10004353mg [Capsella rubella]
           gi|482552019|gb|EOA16212.1| hypothetical protein
           CARUB_v10004353mg [Capsella rubella]
          Length = 635

 Score = 42.4 bits (98), Expect(2) = 1e-05
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 57  NVYLLINLEFATWMRVSIWLFLGSLVLL 140
           N+YLL+NL   TW RVS+WLF+G LV +
Sbjct: 576 NMYLLVNLGAGTWARVSVWLFIGVLVYI 603



 Score = 32.3 bits (72), Expect(2) = 1e-05
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +1

Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTHWRGLTKCTR 225
           GVL    +GRR ++L +AVY+PT H   ++  +R
Sbjct: 598 GVLVYIFYGRRNSALVNAVYVPTAHTEEISPTSR 631


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