BLASTX nr result
ID: Rheum21_contig00034570
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00034570 (277 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325438.1| cationic amino acid transporter 3 family pro... 42 1e-06 ref|XP_006405965.1| hypothetical protein EUTSA_v10027685mg [Eutr... 42 3e-06 ref|XP_006283314.1| hypothetical protein CARUB_v10004353mg [Caps... 42 1e-05 >ref|XP_002325438.1| cationic amino acid transporter 3 family protein [Populus trichocarpa] gi|222862313|gb|EEE99819.1| cationic amino acid transporter 3 family protein [Populus trichocarpa] Length = 641 Score = 42.0 bits (97), Expect(2) = 1e-06 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +3 Query: 57 NVYLLINLEFATWMRVSIWLFLGSLV 134 N+YLLINL ATW RVS+WL +G LV Sbjct: 582 NIYLLINLGAATWTRVSVWLIVGVLV 607 Score = 35.8 bits (81), Expect(2) = 1e-06 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +1 Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTH 198 GVL +GR+ +SLRDAVY+P TH Sbjct: 604 GVLVYVFYGRKHSSLRDAVYVPATH 628 >ref|XP_006405965.1| hypothetical protein EUTSA_v10027685mg [Eutrema salsugineum] gi|557107103|gb|ESQ47418.1| hypothetical protein EUTSA_v10027685mg [Eutrema salsugineum] Length = 635 Score = 42.0 bits (97), Expect(2) = 3e-06 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = +3 Query: 57 NVYLLINLEFATWMRVSIWLFLGSLVLL 140 N+YLL+NL ATW RVS+WL +G LV L Sbjct: 576 NMYLLVNLGAATWARVSVWLVIGVLVYL 603 Score = 34.7 bits (78), Expect(2) = 3e-06 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTHWRGL 210 GVL +G+R +SL DAVY+PT H G+ Sbjct: 598 GVLVYLFYGQRHSSLVDAVYVPTAHAHGI 626 >ref|XP_006283314.1| hypothetical protein CARUB_v10004353mg [Capsella rubella] gi|482552019|gb|EOA16212.1| hypothetical protein CARUB_v10004353mg [Capsella rubella] Length = 635 Score = 42.4 bits (98), Expect(2) = 1e-05 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +3 Query: 57 NVYLLINLEFATWMRVSIWLFLGSLVLL 140 N+YLL+NL TW RVS+WLF+G LV + Sbjct: 576 NMYLLVNLGAGTWARVSVWLFIGVLVYI 603 Score = 32.3 bits (72), Expect(2) = 1e-05 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 Query: 124 GVLFSFLHGRRQNSLRDAVYMPTTHWRGLTKCTR 225 GVL +GRR ++L +AVY+PT H ++ +R Sbjct: 598 GVLVYIFYGRRNSALVNAVYVPTAHTEEISPTSR 631