BLASTX nr result

ID: Rheum21_contig00034468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00034468
         (297 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus...    67   3e-09
gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus...    66   6e-09
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...    62   6e-08
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...    57   3e-06

>gb|ESW10362.1| hypothetical protein PHAVU_009G202600g [Phaseolus vulgaris]
          Length = 513

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = +3

Query: 99  NTFLRKKRKWPHSPYKTKWHYLFAQQQAMHKLKSLASPSPQTLEQSVESETLNPNSIPYL 278
           N +LRK RKWPHSPYKT WH+ F +QQAMHKLK        TLE         P+  P+L
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQ------ATLEMGCPQTPNLPH--PFL 62

Query: 279 LSSLV 293
           LS+L+
Sbjct: 63  LSTLI 67


>gb|ESW12162.1| hypothetical protein PHAVU_008G089500g [Phaseolus vulgaris]
          Length = 514

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = +3

Query: 99  NTFLRKKRKWPHSPYKTKWHYLFAQQQAMHKLKSLASPSPQTLEQSVESETLNPNSIPYL 278
           N +LRK RKWPHSPYKT WH+ F +QQAMHKLK        TLE         P+  P+L
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQ------ATLEMGCPQTPNLPH--PFL 62

Query: 279 LSSLV 293
           LS+L+
Sbjct: 63  LSTLL 67


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/63 (52%), Positives = 39/63 (61%)
 Frame = +3

Query: 105 FLRKKRKWPHSPYKTKWHYLFAQQQAMHKLKSLASPSPQTLEQSVESETLNPNSIPYLLS 284
           FLRK RKWP+SPYK +WH +F QQQAM  LK  A   PQ           +PN  P+LLS
Sbjct: 13  FLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQ---------QESPNK-PHLLS 62

Query: 285 SLV 293
           SL+
Sbjct: 63  SLI 65


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +3

Query: 99  NTFLRKKRKWPHSPYKTKWHYLFAQQQAMHKLKSLASPSPQTLEQSVESETLNPN-SIPY 275
           N +LRK +KWPHSPYKT WH+ F ++QAM  LK        TLE         PN   P+
Sbjct: 11  NKYLRKFKKWPHSPYKTSWHHNFGEEQAMKNLKQ------ATLEMDSSQHPQRPNLPCPF 64

Query: 276 LLSSLV 293
           LLS+L+
Sbjct: 65  LLSTLL 70


>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498545|gb|AES79748.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 653

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = +3

Query: 99  NTFLRKKRKWPHSPYKTKWHYLFAQQQAMHKLKSLASPSPQTLEQSVESETLNPNSIPYL 278
           N +LRK RKWPHSPYKT WH+ F +QQA+  L             + +++T N N+ P+L
Sbjct: 11  NKYLRKFRKWPHSPYKTSWHHNFGEQQAIQIL------------INAKTQTQN-NNDPFL 57

Query: 279 LSSLV 293
           LS+L+
Sbjct: 58  LSTLI 62


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