BLASTX nr result
ID: Rheum21_contig00034402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034402
(279 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 95 8e-18
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 88 1e-15
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 86 7e-15
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 82 1e-13
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 82 1e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 82 1e-13
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 81 2e-13
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 80 2e-13
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 79 6e-13
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 79 8e-13
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 78 1e-12
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 78 1e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 77 3e-12
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 77 3e-12
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 77 3e-12
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 76 4e-12
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 76 5e-12
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 76 5e-12
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 75 7e-12
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 75 7e-12
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 95.1 bits (235), Expect = 8e-18
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLWK-------RPRVRWVD 121
LS+AG+ ELI +VIQG FW+SI P+P V ++ A CR FLW +P V W +
Sbjct: 116 LSYAGKVELIRAVIQGIANFWMSIFPLPQSVLDTIIATCRNFLWGKADGGKIKPLVAWSE 175
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+KE GL L ++K WN + W + +DSLWVR
Sbjct: 176 VCTPKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVR 215
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AG+ ELI +VIQG FW+ I P+P V + A CR FLW K+P V W
Sbjct: 128 LSYAGKLELIRAVIQGIVNFWIGIFPLPQSVLDRINASCRNFLWGKADIGKKKPLVAWSV 187
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWV 4
VC P++E GL L ++K WN + W +DSLWV
Sbjct: 188 VCSPKREGGLGLFNLKDWNLALLSCILWDFHCKKDSLWV 226
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AG+ ELI +VIQG FW+ I +P V + A CR FLW +P V W
Sbjct: 85 LSYAGKLELIRAVIQGIVNFWMEIFSLPQSVMDWINASCRNFLWGKADIGKNKPLVAWSV 144
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLW 7
VC P+KE GL LL++K WN + + W +DSLW
Sbjct: 145 VCSPKKEGGLGLLNLKDWNLALLSRILWDFHCKKDSLW 182
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI+SVI G FW+S +P G + +LC FLW K +V WVD
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
C+P+ E GL WN+ +L+ W + D SLW +
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQ 757
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AGR +L+ SV+ +WL+ P P V + A+CR FLW ++ V W
Sbjct: 176 LSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQ 235
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
+C PR GL+++DI WN+ ++K W++ DSLWV+
Sbjct: 236 ICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVK 275
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI+SVI G FW+S +P G + +LC FLW K +V WVD
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
C+P+ E GL WN+ +L+ W + D SLW +
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQ 757
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS AGR +L+ S+I +W+S+ P+P V + ++CR F+W ++ V W
Sbjct: 279 LSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQ 338
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P + GL+L++++ WN MLK W+I D+LWV+
Sbjct: 339 VCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVK 378
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AGR +LI SVI FW+ LP+P V + A+CR FLW ++ + W
Sbjct: 618 LSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEK 677
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+ GL+++++ WN+ +LK W++ + D+LW++
Sbjct: 678 VCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIK 717
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI SV+ FWLS+ +P + + FLW K+ ++ W +
Sbjct: 952 LSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSE 1011
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC ++E GL L +K NE +LK W IL RDSLWV+
Sbjct: 1012 VCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVK 1051
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AG+ ELI +VIQG FW+ I P+ V + A C FLW + + W
Sbjct: 128 LSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNFLWGKADIGKNKSLIAWSV 187
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+KE GL L ++K WN + + W +D LWVR
Sbjct: 188 VCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVR 227
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLWKRP-------RVRWVD 121
LS+AGR LI SV+ FWLS +P G + LC FLW P ++ WVD
Sbjct: 222 LSYAGRLSLITSVLWSTCNFWLSAFRLPRGCIKEIEKLCSAFLWSGPDLNPHKAKLSWVD 281
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P++E GL L +K N+ LK W ++ +SLWV+
Sbjct: 282 VCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQ 321
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+ G+ ELI +VIQG FW+ I P+P V + A C FLW +P V W
Sbjct: 161 LSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPV 220
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P++E GL L ++K WN + W +DSL VR
Sbjct: 221 VCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVR 260
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI+SVI G FW+S +P G + +LC FLW K +V W
Sbjct: 798 LSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAA 857
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLW 7
+C+P+ E GL L + WN+ ++ W + +DSLW
Sbjct: 858 LCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLW 895
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLWKRP-------RVRWVD 121
LS+AGR LI SV+ FWL+ +P + +C FLW P RV W D
Sbjct: 332 LSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGD 391
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P++E GL L +K NE LK W I+ +SLWVR
Sbjct: 392 VCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVR 431
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR LI+S+I FWLS +P + LC FLW K+ ++ W
Sbjct: 358 LSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQ 417
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+ E GL L +K N+ LK W I+ DSLWV+
Sbjct: 418 VCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVK 457
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI SVI G FW+S + LG + +LC FLW K ++ W
Sbjct: 794 LSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSG 853
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLW 7
VC+P+ E G++L WN+ F L+ W + D LW
Sbjct: 854 VCLPKNEGGVALRRFTPWNKTFYLRFIWPLFADNDVLW 891
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI SVI G FW+S + LG + +LC FLW K ++ W
Sbjct: 794 LSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSG 853
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLW 7
VC+P+ E G+ L WN+ F L+ W + D LW
Sbjct: 854 VCLPKNEGGVGLRRFTPWNKTFYLRFIWPLFADNDVLW 891
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LSFAGR +LI+SVI FW+S +P + ++C FLW K+ +V W D
Sbjct: 61 LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+ E GL + +K N+ +LK W +L SLWV+
Sbjct: 121 VCTPKDEGGLGIRSLKEANKVSLLKLIWRMLS-STSLWVQ 159
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLW-------KRPRVRWVD 121
LS+AGR +L+ +V+ G + W + +P + + LCR +LW K+ + W
Sbjct: 598 LSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDK 657
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWVR 1
VC P+ E GL L+++K WN + K W + + D LW++
Sbjct: 658 VCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIK 697
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = -1
Query: 279 LSFAGRRELIASVIQGCEGFWLSILPVPLGVRTSLTALCRGFLWKRP-------RVRWVD 121
LSFAGR +LI+SVI FWLS +P ++ +C FLW +V W +
Sbjct: 797 LSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQN 856
Query: 120 VCVPRKEWGLSLLDIKTWNECFMLKHFWHILDMRDSLWV 4
C+P+ E GL L + TWN+ L+ W + RDSLWV
Sbjct: 857 SCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWV 895