BLASTX nr result

ID: Rheum21_contig00034216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00034216
         (339 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008992271.1| hypothetical protein Salmi_Mp005 (mitochondr...    97   2e-18
ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp....    97   2e-18
gb|EXB61812.1| hypothetical protein L484_012245 [Morus notabilis]      94   6e-18
dbj|BAG84633.1| hypothetical protein [Aegilops crassa]                 94   1e-17
emb|CAA42947.1| unnamed protein product [Petunia x hybrida]            62   6e-08
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    61   2e-07
gb|AEX57689.1| hypothetical protein RasatMp058 (mitochondrion) [...    59   7e-07

>ref|YP_008992271.1| hypothetical protein Salmi_Mp005 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292250|gb|AGU16542.1| hypothetical
           protein Salmi_Mp005 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 117

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/61 (78%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 339 RGGADTPARITGDGYKNGGEVNSTRRHSGMDVDPSSRDNHSGPGRGSDHSQEPK-RLREA 163
           +GGADTPARITGD YKNGGEVNSTRRHSGMDVDPS RDNHSGPGR    S+  K  LRE 
Sbjct: 57  QGGADTPARITGDSYKNGGEVNSTRRHSGMDVDPSGRDNHSGPGRWRPFSRTKKTELRET 116

Query: 162 L 160
           L
Sbjct: 117 L 117


>ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp. mays]
           gi|40795108|gb|AAR91152.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|413954228|gb|AFW86877.1|
           putative uncharacterized protein orf110-c [Zea mays]
           gi|413954267|gb|AFW86916.1| putative uncharacterized
           protein orf110-c [Zea mays]
          Length = 110

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -1

Query: 336 GGADTPARITGDGYKNGGEVNSTRRHSGMDVDPSSRDNHSGPGRGSDHS 190
           GGADTPARITGDGYKNGGEV STRRHSGM+VDPS RDNHSGPGRG D S
Sbjct: 60  GGADTPARITGDGYKNGGEVKSTRRHSGMNVDPSGRDNHSGPGRGGDTS 108


>gb|EXB61812.1| hypothetical protein L484_012245 [Morus notabilis]
          Length = 80

 Score = 94.4 bits (233), Expect(2) = 6e-18
 Identities = 43/48 (89%), Positives = 43/48 (89%)
 Frame = +3

Query: 165 LPSAFLVLENGRYLSQDRNDYPCSMGLHPSLNVVGYCSLPRHSCNRHL 308
           L S FLVLENGR LSQD NDYPC MGLHPSLNVVGYCSLPRHSCNRHL
Sbjct: 33  LSSVFLVLENGRNLSQDWNDYPCPMGLHPSLNVVGYCSLPRHSCNRHL 80



 Score = 21.9 bits (45), Expect(2) = 6e-18
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +2

Query: 140 AVVSVTYRASLS 175
           AVVSVT++ASLS
Sbjct: 23  AVVSVTHKASLS 34


>dbj|BAG84633.1| hypothetical protein [Aegilops crassa]
          Length = 113

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 43/49 (87%), Positives = 44/49 (89%)
 Frame = -1

Query: 336 GGADTPARITGDGYKNGGEVNSTRRHSGMDVDPSSRDNHSGPGRGSDHS 190
           GGADTPARITGDGYKNGGEV STRRHSGM+VDPS  DNHSGPGRG D S
Sbjct: 63  GGADTPARITGDGYKNGGEVKSTRRHSGMNVDPSGGDNHSGPGRGGDTS 111


>emb|CAA42947.1| unnamed protein product [Petunia x hybrida]
          Length = 92

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = -2

Query: 335 GVRTHLRGLQVTVTRMAGK*TVPDDIQGWM 246
           GVRTHLRGLQVTVTRMAGK TVPDDIQGWM
Sbjct: 63  GVRTHLRGLQVTVTRMAGKLTVPDDIQGWM 92


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -2

Query: 335 GVRTHLRGLQVTVTRMAGK*TVPDDIQGWM 246
           GVRTHLRGLQVTVTRMAGK TVPDDIQGW+
Sbjct: 151 GVRTHLRGLQVTVTRMAGKLTVPDDIQGWI 180


>gb|AEX57689.1| hypothetical protein RasatMp058 (mitochondrion) [Raphanus sativus]
          Length = 107

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 259 MSSGTVHFPAILVTVTCNPRRCVRTP 336
           MSSGTVHFPAILVTVTCNPRRCVRTP
Sbjct: 1   MSSGTVHFPAILVTVTCNPRRCVRTP 26


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