BLASTX nr result
ID: Rheum21_contig00034190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034190
(304 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 159 4e-37
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 159 4e-37
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 159 4e-37
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 159 4e-37
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 159 4e-37
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana] 157 1e-36
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 157 1e-36
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 146 2e-33
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 131 8e-29
gb|AAD32876.1|AC005489_14 F14N23.14 [Arabidopsis thaliana] 126 3e-27
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 113 3e-23
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 105 8e-21
gb|ABF99351.1| retrotransposon protein, putative, unclassified [... 103 2e-20
gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japoni... 103 2e-20
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 3e-20
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera] 100 2e-19
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 100 2e-19
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 100 3e-19
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 100 3e-19
ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808... 100 3e-19
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 159 bits (402), Expect = 4e-37
Identities = 70/100 (70%), Positives = 87/100 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 485
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLGKQF+ SFPKE+ +A +
Sbjct: 486 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQK 525
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 159 bits (402), Expect = 4e-37
Identities = 70/100 (70%), Positives = 87/100 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 388 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 447
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLGKQF+ SFPKE+ +A +
Sbjct: 448 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQK 487
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 159 bits (402), Expect = 4e-37
Identities = 70/100 (70%), Positives = 87/100 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 485
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLGKQF+ SFPKE+ +A +
Sbjct: 486 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQK 525
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 159 bits (402), Expect = 4e-37
Identities = 70/100 (70%), Positives = 87/100 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 485
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLGKQF+ SFPKE+ +A +
Sbjct: 486 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQK 525
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 159 bits (402), Expect = 4e-37
Identities = 70/100 (70%), Positives = 87/100 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 485
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLGKQF+ SFPKE+ +A +
Sbjct: 486 KEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQK 525
>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 544
Score = 157 bits (397), Expect = 1e-36
Identities = 69/100 (69%), Positives = 86/100 (86%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 442 IRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 501
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLG QF+ SFPKE+ +A +
Sbjct: 502 KEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQK 541
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 157 bits (397), Expect = 1e-36
Identities = 69/100 (69%), Positives = 86/100 (86%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 426 IRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 485
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
KEMVRG+P I HP+Q+C GCLLG QF+ SFPKE+ +A +
Sbjct: 486 KEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQK 525
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 146 bits (369), Expect = 2e-33
Identities = 66/90 (73%), Positives = 76/90 (84%)
Frame = -3
Query: 272 KVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSKKEMVRGIPSI 93
KV M+KNRMF L+IQ+DV KCLK CY D SWLWHLRFGHLNF GLE L+KKEMVR +PSI
Sbjct: 353 KVPMSKNRMFLLNIQNDVGKCLKACYTDSSWLWHLRFGHLNFDGLERLAKKEMVRDLPSI 412
Query: 92 QHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
HPDQLC CL+GKQFRKSFPKE+ +A++
Sbjct: 413 NHPDQLCERCLIGKQFRKSFPKESTTRATK 442
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 131 bits (330), Expect = 8e-29
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
++D NLI KV M++NRMF L+I+++ AKCLK KDESW WH+RFGHLNFG L+ L +
Sbjct: 117 LRDKNSNLIAKVFMSRNRMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGE 176
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKA 9
++MV+G+P I HP+QLC CLLGK R+SFPKEA +A
Sbjct: 177 EKMVKGMPQINHPNQLCEACLLGKHARRSFPKEANSRA 214
>gb|AAD32876.1|AC005489_14 F14N23.14 [Arabidopsis thaliana]
Length = 194
Score = 126 bits (317), Expect = 3e-27
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D + NLI KV M+KNRMF L+I++D+A+CLK CYK+ESWLWHLRFGHLNFGGLELLS+
Sbjct: 109 IRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSR 168
Query: 122 KEMVRGIPSIQHPDQLC 72
KEMVRG+P I HP Q C
Sbjct: 169 KEMVRGLPCINHPKQGC 185
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 113 bits (282), Expect = 3e-23
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D K LI +V MT NRMFPL++ + C DE WLWH R+GHLNFGGL+ L +
Sbjct: 384 IQDEKLGLIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQ 443
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
K MV G+P I P Q+C C++GKQ R FPK W+ ++
Sbjct: 444 KNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNK 483
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 105 bits (261), Expect = 8e-21
Identities = 47/100 (47%), Positives = 60/100 (60%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D K LI +V MT NRMFPL++ + C DE WLWH R+GHLNF L+ L
Sbjct: 384 IQDEKLGLIAQVNMTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQX 443
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
K MV G+P IQ Q+C C+ GKQ R FPK W+ ++
Sbjct: 444 KNMVTGLPXIQTXSQICEECVXGKQHRYQFPKGKSWRXNK 483
>gb|ABF99351.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1190
Score = 103 bits (257), Expect = 2e-20
Identities = 44/99 (44%), Positives = 63/99 (63%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+DP L+ KV+ NR++ L + + CL C D +WLWH RFGHL+F L L+
Sbjct: 265 IRDPAKKLLAKVRCNANRLYLLKLMTGHPVCLSACTSDTAWLWHARFGHLHFDALRKLAD 324
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKAS 6
K+MVRG+P I+H +QLC GC++ K R FP A ++A+
Sbjct: 325 KDMVRGLPRIEHVEQLCDGCIISKHRRSPFPTRAVYRAT 363
>gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1182
Score = 103 bits (257), Expect = 2e-20
Identities = 44/99 (44%), Positives = 63/99 (63%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+DP L+ KV+ NR++ L + + CL C D +WLWH RFGHL+F L L+
Sbjct: 265 IRDPAKKLLAKVRCNANRLYLLKLMTGHPVCLSACTSDTAWLWHARFGHLHFDALRKLAD 324
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKAS 6
K+MVRG+P I+H +QLC GC++ K R FP A ++A+
Sbjct: 325 KDMVRGLPRIEHVEQLCDGCIISKHRRSPFPTRAVYRAT 363
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101216349 [Cucumis sativus]
Length = 1830
Score = 103 bits (256), Expect = 3e-20
Identities = 46/100 (46%), Positives = 63/100 (63%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+ G+LI KV+MT N+MFP+ I + C + D SWLWH RFGHL+F L + +
Sbjct: 397 IRTKNGDLITKVRMTHNKMFPIKICYEKLVCFETLVNDTSWLWHCRFGHLSFDTLSHMCQ 456
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
+ MVRG+ +I+ DQLC C+ GK R SFP W+AS+
Sbjct: 457 QHMVRGMSNIKKEDQLCEACVFGKHHRNSFPTGGSWRASK 496
>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
Length = 1202
Score = 100 bits (249), Expect = 2e-19
Identities = 49/92 (53%), Positives = 59/92 (64%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I DP I V+M NR+FPL I S V L KD SWLWHLR+GHLNFGGL+ L +
Sbjct: 356 IYDPSRGAIXVVQMASNRLFPLKIDS-VQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQ 414
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPK 27
K MV G+P I P Q+C C++GKQ R FP+
Sbjct: 415 KHMVTGLPQISIPSQVCEECVVGKQHRSQFPQ 446
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 100 bits (249), Expect = 2e-19
Identities = 43/91 (47%), Positives = 61/91 (67%)
Frame = -3
Query: 281 LIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSKKEMVRGI 102
L++KV+ T NR++ + +Q CL D +WLWH R GH+NF L+LL KEMV G+
Sbjct: 273 LVMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGV 332
Query: 101 PSIQHPDQLCTGCLLGKQFRKSFPKEAEWKA 9
P++ HP+QLC CL+ KQ R+SFP A ++A
Sbjct: 333 PAVHHPNQLCQACLVAKQVRQSFPGMANYRA 363
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 100 bits (248), Expect = 3e-19
Identities = 49/92 (53%), Positives = 59/92 (64%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I DP I V+M NR+FPL I S V L KD SWLWHLR+GHLNFGGL+ L +
Sbjct: 277 IYDPSRGAIAVVQMGSNRLFPLKIDS-VQSFLMAEVKDLSWLWHLRYGHLNFGGLKTLQQ 335
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPK 27
K MV G+P I P Q+C C++GKQ R FP+
Sbjct: 336 KHMVTGLPQISIPSQVCEECVVGKQHRSQFPQ 367
>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
Length = 1041
Score = 100 bits (248), Expect = 3e-19
Identities = 44/100 (44%), Positives = 61/100 (61%)
Frame = -3
Query: 302 IKDPKGNLIVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSK 123
I+D K +I +V MT NR FPL++ + + C K E+WLWH R+GHLNFGGL+ L +
Sbjct: 198 IQDAKLGIIAQVNMTVNRTFPLYLHNTIHLCFLAKLKYEAWLWHFRYGHLNFGGLKTLQQ 257
Query: 122 KEMVRGIPSIQHPDQLCTGCLLGKQFRKSFPKEAEWKASR 3
K MV G+P I Q C C++ KQ FP+ W+A +
Sbjct: 258 KNMVTGLPQIIASSQFCEECVVSKQHCNQFPQVKSWRAKK 297
>ref|XP_006598425.1| PREDICTED: uncharacterized protein LOC100808159 [Glycine max]
Length = 1550
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/90 (50%), Positives = 59/90 (65%)
Frame = -3
Query: 278 IVKVKMTKNRMFPLHIQSDVAKCLKGCYKDESWLWHLRFGHLNFGGLELLSKKEMVRGIP 99
I V+M+ NR+FPL I+S + C K +D SWLWH R+GHLNF GL+ L +K MV +P
Sbjct: 1074 IAIVQMSSNRLFPLKIES-IQTCFKTDMEDPSWLWHFRYGHLNFSGLKTLQQKNMVTCLP 1132
Query: 98 SIQHPDQLCTGCLLGKQFRKSFPKEAEWKA 9
I P Q+C C++GKQ R FPK W+A
Sbjct: 1133 QINIPSQVCEECVVGKQHRSQFPKGKSWRA 1162