BLASTX nr result
ID: Rheum21_contig00034186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00034186
(511 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466854.1| PREDICTED: pentatricopeptide repeat-containi... 155 4e-36
ref|XP_006425612.1| hypothetical protein CICLE_v10025108mg [Citr... 155 4e-36
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi... 153 2e-35
ref|XP_006340666.1| PREDICTED: pentatricopeptide repeat-containi... 151 7e-35
emb|CBI17453.3| unnamed protein product [Vitis vinifera] 149 4e-34
gb|EMJ04971.1| hypothetical protein PRUPE_ppa002597mg [Prunus pe... 148 6e-34
gb|EOX90979.1| Pentatricopeptide repeat (PPR) superfamily protei... 147 1e-33
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|5... 145 4e-33
ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-33
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-33
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-33
emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera] 145 5e-33
gb|EXC24885.1| hypothetical protein L484_013254 [Morus notabilis] 144 9e-33
ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ... 142 5e-32
ref|XP_004289114.1| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
gb|ESW31432.1| hypothetical protein PHAVU_002G237800g [Phaseolus... 140 2e-31
ref|XP_006280148.1| hypothetical protein CARUB_v10026047mg [Caps... 132 6e-29
ref|XP_006280147.1| hypothetical protein CARUB_v10026047mg [Caps... 132 6e-29
ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group] g... 131 8e-29
>ref|XP_006466854.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like isoform X1 [Citrus sinensis]
gi|568824952|ref|XP_006466855.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g44230-like isoform X2 [Citrus sinensis]
gi|568824954|ref|XP_006466856.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g44230-like isoform X3 [Citrus sinensis]
gi|568824956|ref|XP_006466857.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g44230-like isoform X4 [Citrus sinensis]
Length = 653
Score = 155 bits (393), Expect = 4e-36
Identities = 67/93 (72%), Positives = 81/93 (87%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL SV YD+ +++ RIL+THSEKLAL+FGLLTT G+T+RIMKNLR+CEDCH+FM
Sbjct: 561 GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFM 620
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S++ REIVVRDNMRFHHF G+CSCGN+W
Sbjct: 621 CGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 653
>ref|XP_006425612.1| hypothetical protein CICLE_v10025108mg [Citrus clementina]
gi|557527602|gb|ESR38852.1| hypothetical protein
CICLE_v10025108mg [Citrus clementina]
Length = 653
Score = 155 bits (393), Expect = 4e-36
Identities = 67/93 (72%), Positives = 81/93 (87%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL SV YD+ +++ RIL+THSEKLAL+FGLLTT G+T+RIMKNLR+CEDCH+FM
Sbjct: 561 GYQPNLRSVLYDVSDEEKKRILMTHSEKLALAFGLLTTSPGATVRIMKNLRICEDCHLFM 620
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S++ REIVVRDNMRFHHF G+CSCGN+W
Sbjct: 621 CGASQVIGREIVVRDNMRFHHFQDGKCSCGNYW 653
>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 153 bits (387), Expect = 2e-35
Identities = 68/93 (73%), Positives = 81/93 (87%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL+SV+YDI +++ R+L++HSEKLAL+FGLLTT+ G TIRI+KNLR+CEDCH M
Sbjct: 555 GYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 614
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S+IT REIVVRDNMRFHHF G CSCGNFW
Sbjct: 615 CGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
>ref|XP_006340666.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Solanum tuberosum]
Length = 654
Score = 151 bits (382), Expect = 7e-35
Identities = 70/94 (74%), Positives = 80/94 (85%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDD-GSTIRIMKNLRMCEDCHMF 177
GY+PNL+SV YD+ E+ RILLTHSEKLAL++GLL TD GSTIRIMKNLR+CEDCH F
Sbjct: 561 GYEPNLSSVPYDLNEEHKRRILLTHSEKLALAYGLLITDSAGSTIRIMKNLRICEDCHSF 620
Query: 178 MCGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
MCG S+IT REI+VRDN RFHHF+ G CSCGNFW
Sbjct: 621 MCGASQITGREIIVRDNKRFHHFHNGVCSCGNFW 654
>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 149 bits (376), Expect = 4e-34
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL+SV+YDI +++ R+L++HSEKLAL+FGLLTT+ G TIRI+KNLR+CEDCH M
Sbjct: 337 GYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 396
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNF 276
CG S+IT REIVVRDNMRFHHF G CSCGNF
Sbjct: 397 CGASQITGREIVVRDNMRFHHFRDGRCSCGNF 428
>gb|EMJ04971.1| hypothetical protein PRUPE_ppa002597mg [Prunus persica]
Length = 654
Score = 148 bits (374), Expect = 6e-34
Identities = 63/93 (67%), Positives = 81/93 (87%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL S +YD+ ++ RIL++HSEKLAL++ L++TD GSTI+IMKN+R+CEDCH+FM
Sbjct: 562 GYQPNLNSAAYDLGIEERKRILMSHSEKLALAYALVSTDSGSTIKIMKNIRICEDCHVFM 621
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S++ REIVVRDNMRFHHF+ G+CSCGNFW
Sbjct: 622 CGASQVAGREIVVRDNMRFHHFSNGKCSCGNFW 654
>gb|EOX90979.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 658
Score = 147 bits (371), Expect = 1e-33
Identities = 63/93 (67%), Positives = 78/93 (83%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPN++SV+YD+ ++D R+L+ HSEKLAL+FGLLT IRIMKNLR+CEDCH FM
Sbjct: 566 GYQPNMSSVAYDVNDEDKRRLLMAHSEKLALAFGLLTISADCPIRIMKNLRICEDCHSFM 625
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S+IT R I+VRDN+RFHHF+ G+CSCGNFW
Sbjct: 626 CGVSQITERVIIVRDNLRFHHFHAGKCSCGNFW 658
>ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|566170937|ref|XP_006383156.1| hypothetical protein
POPTR_0005s12100g [Populus trichocarpa]
gi|550338737|gb|ERP60953.1| hypothetical protein
POPTR_0005s12100g [Populus trichocarpa]
Length = 654
Score = 145 bits (367), Expect = 4e-33
Identities = 65/93 (69%), Positives = 80/93 (86%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQP+L+SVSYD+ ++D RIL+THSEKLAL+FGL++T GS IRI+KNLR+CEDCH +
Sbjct: 562 GYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVI 621
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S+IT REI+VRD MRFHHF+ G CSCGNFW
Sbjct: 622 CGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
>ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Solanum lycopersicum]
Length = 651
Score = 145 bits (366), Expect = 5e-33
Identities = 68/94 (72%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDD-GSTIRIMKNLRMCEDCHMF 177
GY+PNL+SV YD+ E+ RILLTHSEKLAL++GLL TD GSTI+IMKNLR+CEDCH F
Sbjct: 558 GYEPNLSSVPYDLNEEHKRRILLTHSEKLALAYGLLITDSAGSTIKIMKNLRICEDCHSF 617
Query: 178 MCGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
M G S+IT REI+VRDN RFHHF G CSCGNFW
Sbjct: 618 MGGASQITGREIIVRDNKRFHHFRNGVCSCGNFW 651
>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 145 bits (366), Expect = 5e-33
Identities = 62/93 (66%), Positives = 77/93 (82%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY+PNL S YD+ +D+ RIL++HSEKLAL++GLL T+ G TI+IMKN+R+CEDCH M
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
C S+IT REI+VRDNMRFHHF+ G CSCGNFW
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 145 bits (366), Expect = 5e-33
Identities = 62/93 (66%), Positives = 77/93 (82%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY+PNL S YD+ +D+ RIL++HSEKLAL++GLL T+ G TI+IMKN+R+CEDCH M
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
C S+IT REI+VRDNMRFHHF+ G CSCGNFW
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
>emb|CAN84077.1| hypothetical protein VITISV_032319 [Vitis vinifera]
Length = 228
Score = 145 bits (366), Expect = 5e-33
Identities = 70/105 (66%), Positives = 84/105 (80%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL+SV+YDI +++ R+L++HSEKLAL+FGLLTT+ G TIRI+KNLR+CEDCH M
Sbjct: 95 GYQPNLSSVAYDIIDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVM 154
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW*SEALENLVAGN 315
CG S+IT REIVVRDNMRFHHF G CSCG + NLVA N
Sbjct: 155 CGASQITGREIVVRDNMRFHHFRDGGCSCG-------IRNLVALN 192
>gb|EXC24885.1| hypothetical protein L484_013254 [Morus notabilis]
Length = 615
Score = 144 bits (364), Expect = 9e-33
Identities = 63/93 (67%), Positives = 77/93 (82%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY P L SV YD+ +D+ R+L+THSEKLAL +GL+T D G TI+IMKNLR+CEDCH+ M
Sbjct: 523 GYLPKLDSVVYDLSDDEKKRLLMTHSEKLALVYGLITIDGGCTIKIMKNLRICEDCHVVM 582
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG SKIT REI++RDNMRFHHF G+CSCG+FW
Sbjct: 583 CGASKITGREIIIRDNMRFHHFCDGKCSCGDFW 615
>ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 616
Score = 142 bits (358), Expect = 5e-32
Identities = 67/94 (71%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILL-THSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMF 177
GYQP L SV YDI +D+G R LL +HSEKLAL++GLL+TD GSTI+IMKNLR+CEDCH+
Sbjct: 524 GYQPKLNSVPYDI-DDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIV 582
Query: 178 MCGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
MCG SK+T R+I+VRDNMRFHHF G CSC NFW
Sbjct: 583 MCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616
>ref|XP_004289114.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 141 bits (355), Expect = 1e-31
Identities = 59/93 (63%), Positives = 76/93 (81%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY+PNL SV YD+ +++ RIL+ HSEKLAL++ LL D G TI+I+KN+R+CEDCH FM
Sbjct: 558 GYRPNLNSVDYDVGDEEKMRILMAHSEKLALAYALLNADTGPTIKIIKNIRICEDCHGFM 617
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S++T R I+VRDNMRFHHF G+C+CGNFW
Sbjct: 618 CGASQVTGRHIIVRDNMRFHHFENGKCNCGNFW 650
>ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 140 bits (354), Expect = 1e-31
Identities = 63/93 (67%), Positives = 76/93 (81%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQPNL+S+ Y I + + +L+ HSEKLAL+FGLL+TD GSTI+IMKNLR+CEDCH+ M
Sbjct: 525 GYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVM 584
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG SK+T R+IVVRDN RFHHF G CSC NFW
Sbjct: 585 CGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617
>gb|ESW31432.1| hypothetical protein PHAVU_002G237800g [Phaseolus vulgaris]
Length = 617
Score = 140 bits (352), Expect = 2e-31
Identities = 62/93 (66%), Positives = 77/93 (82%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY PNL+SV YD+ +D+ +L+ HSEKLAL+FGLL+TD GSTI+IMKNLR+C+DCH+ M
Sbjct: 525 GYIPNLSSVLYDVNDDEKKLLLMAHSEKLALAFGLLSTDAGSTIKIMKNLRICKDCHIVM 584
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
CG S++T R+IVVRDN RFHHF G CSC NFW
Sbjct: 585 CGASRLTGRKIVVRDNTRFHHFLNGACSCRNFW 617
>ref|XP_006280148.1| hypothetical protein CARUB_v10026047mg [Capsella rubella]
gi|482548852|gb|EOA13046.1| hypothetical protein
CARUB_v10026047mg [Capsella rubella]
Length = 657
Score = 132 bits (331), Expect = 6e-29
Identities = 59/93 (63%), Positives = 74/93 (79%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQP+L+SV YD+ ++ IL+ H+EKLAL+F LLTT STI+IMKNLRMC+DCH FM
Sbjct: 565 GYQPDLSSVPYDVSDNAKRSILIQHTEKLALAFCLLTTSRDSTIKIMKNLRMCQDCHTFM 624
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
S++TRR I++RDNMRFHHF G CSCG+FW
Sbjct: 625 RLASEVTRRVIIMRDNMRFHHFKSGACSCGDFW 657
>ref|XP_006280147.1| hypothetical protein CARUB_v10026047mg [Capsella rubella]
gi|482548851|gb|EOA13045.1| hypothetical protein
CARUB_v10026047mg [Capsella rubella]
Length = 565
Score = 132 bits (331), Expect = 6e-29
Identities = 59/93 (63%), Positives = 74/93 (79%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GYQP+L+SV YD+ ++ IL+ H+EKLAL+F LLTT STI+IMKNLRMC+DCH FM
Sbjct: 473 GYQPDLSSVPYDVSDNAKRSILIQHTEKLALAFCLLTTSRDSTIKIMKNLRMCQDCHTFM 532
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
S++TRR I++RDNMRFHHF G CSCG+FW
Sbjct: 533 RLASEVTRRVIIMRDNMRFHHFKSGACSCGDFW 565
>ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa
Japonica Group] gi|125598347|gb|EAZ38127.1| hypothetical
protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 131 bits (330), Expect = 8e-29
Identities = 58/93 (62%), Positives = 73/93 (78%)
Frame = +1
Query: 1 GYQPNLASVSYDICEDDGHRILLTHSEKLALSFGLLTTDDGSTIRIMKNLRMCEDCHMFM 180
GY P L+S+ YD+ +++ R+L+ HSEKLALSFGLLT G TIRI+KNLR+C+DCH+FM
Sbjct: 556 GYVPILSSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFM 615
Query: 181 CGTSKITRREIVVRDNMRFHHFNGGECSCGNFW 279
S++ EI+VRDNMRFHHF GECSCG FW
Sbjct: 616 QLVSRVESVEIIVRDNMRFHHFKNGECSCGGFW 648