BLASTX nr result

ID: Rheum21_contig00033999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00033999
         (235 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ15150.1| hypothetical protein PRUPE_ppa003669mg [Prunus pe...    57   3e-06
gb|AGC39094.1| remorin-3 protein [Dimocarpus longan] gi|51153742...    57   3e-06
gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]                 57   3e-06
ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256...    56   6e-06
emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]    56   6e-06
ref|XP_002300338.1| remorin family protein [Populus trichocarpa]...    55   7e-06
gb|EOY27590.1| Remorin family protein isoform 3 [Theobroma cacao]      55   1e-05
gb|EOY27589.1| Remorin family protein isoform 2 [Theobroma cacao]      55   1e-05
gb|EOY27588.1| Remorin family protein isoform 1 [Theobroma cacao]      55   1e-05

>gb|EMJ15150.1| hypothetical protein PRUPE_ppa003669mg [Prunus persica]
          Length = 557

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVTNCSQSVL-------------QSL-R 140
           P++L+DSEF K+SLL     D E    SLE  S    S+  L             +SL R
Sbjct: 65  PSKLDDSEFFKNSLLDPMNGDEEVASSSLEVLSTNLSSEPALDLRESDQTSCQMKESLPR 124

Query: 141 EHGDEYSMR-------DSVNSCAIHPMKYMEDENLDYD 233
           E+GD   +R       DS +S AIHPM+ MEDENLDYD
Sbjct: 125 ENGDAVRVRLQQCTKGDSGSSSAIHPMRAMEDENLDYD 162


>gb|AGC39094.1| remorin-3 protein [Dimocarpus longan] gi|511537420|gb|AGN88927.1|
           remorin-3 protein [Dimocarpus longan]
          Length = 541

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVH--SLEASSVTNCSQSVLQSLREHGDEYSMR--- 167
           PA+L+DSEF ++SLLAS   D + EV   SL+ +S     + VL +  + GD+ S +   
Sbjct: 43  PAKLDDSEFVRNSLLASNGGDFDEEVAAPSLDVASEKAGREVVLDN-NQGGDQASCQLKE 101

Query: 168 -------------------DSVNSCAIHPMKYMEDENLDYD 233
                              DS NS AIHPM+  EDENLDYD
Sbjct: 102 AMPRESADVGRSKMQFLKVDSGNSNAIHPMRVFEDENLDYD 142


>gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]
          Length = 249

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVH--SLEASSVTNCSQSVLQSLREHGDEYSMR--- 167
           PA+L+DSEF ++SLLAS   D + EV   SL+ +S     + VL +  + GD+ S +   
Sbjct: 43  PAKLDDSEFVRNSLLASNGGDFDEEVAAPSLDVASEKAGREVVLDN-NQGGDQASCQLKE 101

Query: 168 -------------------DSVNSCAIHPMKYMEDENLDYD 233
                              DS NS AIHPM+  EDENLDYD
Sbjct: 102 AMPRESADVGRSKMQFLKVDSGNSNAIHPMRVFEDENLDYD 142


>ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera]
           gi|297740766|emb|CBI30948.3| unnamed protein product
           [Vitis vinifera]
          Length = 526

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVT-------------NCSQSVLQSL-R 140
           P++LEDSEF K+SLLA      E+E  SLE SSV                S    +SL R
Sbjct: 44  PSKLEDSEFVKNSLLA-----LEDEASSLEVSSVKLPGDVMPDLAQGDQISCQPKESLPR 98

Query: 141 EHGD-------EYSMRDSVNSCAIHPMKYMEDENLDYD 233
           E+G        +YS  D+ NS  IHP++ +E+ENLDYD
Sbjct: 99  ENGSVGRVKTQQYSKCDTGNSSTIHPVRTLEEENLDYD 136


>emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]
          Length = 585

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVT-------------NCSQSVLQSL-R 140
           P++LEDSEF K+SLLA      E+E  SLE SSV                S    +SL R
Sbjct: 103 PSKLEDSEFVKNSLLA-----LEDEASSLEVSSVKLPGDVMPDLAQGDQISCQPKESLPR 157

Query: 141 EHGD-------EYSMRDSVNSCAIHPMKYMEDENLDYD 233
           E+G        +YS  D+ NS  IHP++ +E+ENLDYD
Sbjct: 158 ENGSVGRVKTQQYSKCDTGNSSTIHPVRTLEEENLDYD 195


>ref|XP_002300338.1| remorin family protein [Populus trichocarpa]
           gi|222847596|gb|EEE85143.1| remorin family protein
           [Populus trichocarpa]
          Length = 528

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 19/96 (19%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSL--EASSVTNCSQSVLQSL----------REH 146
           P++L+D+EF K+SLLAS   D   EV +L  E +SV   S++VL             +E 
Sbjct: 44  PSKLQDNEFVKNSLLASDFGDFGEEVAALGLEVASVNFPSEAVLDLCQADLPMETVPKEI 103

Query: 147 GDE-------YSMRDSVNSCAIHPMKYMEDENLDYD 233
           GD        +S  +  NS A+HP++ +EDENLDYD
Sbjct: 104 GDAGRVKMQPFSKCEKGNSSAVHPVRTVEDENLDYD 139


>gb|EOY27590.1| Remorin family protein isoform 3 [Theobroma cacao]
          Length = 486

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVTNCSQSVLQSL--------------- 137
           P+R+ED+EF  +SLLAS + +   EV SL+ + V   +++VL S                
Sbjct: 44  PSRIEDAEFV-NSLLASKSGEFYEEVPSLDVAPVKISNETVLDSSLNDQISSQPKESLPR 102

Query: 138 ------REHGDEYSMRDSVNSCAIHPMKYMEDENLDYD 233
                 R    ++S  D+ NS AIHP++ +EDENLDYD
Sbjct: 103 ESIDVGRSKLQQFSKSDNGNSSAIHPIRTIEDENLDYD 140


>gb|EOY27589.1| Remorin family protein isoform 2 [Theobroma cacao]
          Length = 503

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVTNCSQSVLQSL--------------- 137
           P+R+ED+EF  +SLLAS + +   EV SL+ + V   +++VL S                
Sbjct: 44  PSRIEDAEFV-NSLLASKSGEFYEEVPSLDVAPVKISNETVLDSSLNDQISSQPKESLPR 102

Query: 138 ------REHGDEYSMRDSVNSCAIHPMKYMEDENLDYD 233
                 R    ++S  D+ NS AIHP++ +EDENLDYD
Sbjct: 103 ESIDVGRSKLQQFSKSDNGNSSAIHPIRTIEDENLDYD 140


>gb|EOY27588.1| Remorin family protein isoform 1 [Theobroma cacao]
          Length = 536

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
 Frame = +3

Query: 3   PARLEDSEFAKSSLLASTARDCENEVHSLEASSVTNCSQSVLQSL--------------- 137
           P+R+ED+EF  +SLLAS + +   EV SL+ + V   +++VL S                
Sbjct: 44  PSRIEDAEFV-NSLLASKSGEFYEEVPSLDVAPVKISNETVLDSSLNDQISSQPKESLPR 102

Query: 138 ------REHGDEYSMRDSVNSCAIHPMKYMEDENLDYD 233
                 R    ++S  D+ NS AIHP++ +EDENLDYD
Sbjct: 103 ESIDVGRSKLQQFSKSDNGNSSAIHPIRTIEDENLDYD 140


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