BLASTX nr result

ID: Rheum21_contig00033876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00033876
         (404 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p...    60   3e-07

>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
           trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
           protein AMTR_s04653p00000520, partial [Amborella
           trichopoda]
          Length = 563

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/101 (31%), Positives = 51/101 (50%)
 Frame = +1

Query: 4   PSDCMLVGFAGEHVRVVGTLRVDVILGDTKE*RRSP*TKFFALKTPSVYNAILGRTSLNK 183
           P    + GF G+ + + G +++ + LG      +S    F  +   S YNA++GR  L +
Sbjct: 317 PMTSSIYGFTGDVIAIKGMIKLPITLGTAPITAKSM-ADFAVIDQYSAYNAVIGRPILKE 375

Query: 184 L*TAMSIYHFSV*FPTSEGTGVSRGHSAKSRTCYLTTLKEK 306
           +    SIYH ++ FPT  G G  RG  + SR CY   +K +
Sbjct: 376 MKIVTSIYHLTMKFPTPSGVGSVRGVQSDSRECYNAAVKAR 416


Top