BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00033735
         (268 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322960.2| pentatricopeptide repeat-containing family p...   128   7e-28
emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]   125   8e-27
gb|EMJ06165.1| hypothetical protein PRUPE_ppa002297mg [Prunus pe...   123   2e-26
emb|CBI15896.3| unnamed protein product [Vitis vinifera]              122   5e-26
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
gb|EOY07289.1| Pentatricopeptide repeat (PPR) superfamily protei...   120   2e-25
gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis]     118   7e-25
ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   116   3e-24
ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containi...   116   4e-24
gb|ACU25687.1| pentatricopeptide repeat-containing protein [Dura...   110   2e-22
ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_006363056.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_006363054.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouc...   108   1e-21
gb|AGW82673.1| pentatricopeptide repeat-containing protein, part...   107   2e-21
gb|ACU25683.1| pentatricopeptide repeat-containing protein [Cith...   107   2e-21
gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lant...   107   2e-21
gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stac...   105   5e-21

>ref|XP_002322960.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550321307|gb|EEF04721.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 694

 Score =  128 bits (322), Expect = 7e-28
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER++DAY  V+EML+K  +PD++TYSLLMDGL Q K  +MALNLW Q L +G++PD+TMH
Sbjct: 513 ERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NIL+HG CSAGK+EDALLLY  MK+ +C
Sbjct: 573 NILMHGLCSAGKIEDALLLYSNMKQSNC 600



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/76 (36%), Positives = 46/76 (60%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA  L   M Q +  P++VT++ LMDGL++++  EMA  +W      G +PD+  +NI +
Sbjct: 587 DALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITL 646

Query: 195 HGFCSAGKVEDALLLY 242
            G CS G++ D + L+
Sbjct: 647 KGLCSCGRISDGIALF 662



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 21/84 (25%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +3

Query: 18  AYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQG-IKPDMTMHNILI 194
           A ++  EM ++ L PD++ Y++++DG F+  +      +W + +    + P++  +N++I
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262

Query: 195 HGFCSAGKVEDALLLYLKMKERDC 266
           +G C  G+ +++L ++ +MK+ +C
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNEC 286



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/87 (26%), Positives = 52/87 (59%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           R+ ++ ++   M +   + D+ TYS L+ GL    N + A+ ++ + + + +  D+  +N
Sbjct: 270 RFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYN 329

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            L++GFC AGK++++  L++ M + +C
Sbjct: 330 ALLNGFCRAGKIKESFELWVMMGKENC 356


>emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  125 bits (313), Expect = 8e-27
 Identities = 57/88 (64%), Positives = 74/88 (84%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+++AY LV+EMLQK  +P+++TYSLLM+GL Q K  +MALNLW QAL +G KPD+ MH
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CS+GKVEDAL LY +MK+R+C
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNC 575



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 26/73 (35%), Positives = 47/73 (64%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L  EM Q++  P++VT++ LM+G ++ ++ E A  +W   L  G++PD+  +NI +
Sbjct: 562 DALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITL 621

Query: 195 HGFCSAGKVEDAL 233
            G CS  ++ DA+
Sbjct: 622 KGLCSCHRISDAV 634



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/85 (29%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +3

Query: 12  ADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQAL-NQGIKPDMTMHNI 188
           +DA KL  EM ++ + PD+  Y++L+DG F+  +   A  +W + L    + P++  +N+
Sbjct: 176 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235

Query: 189 LIHGFCSAGKVEDALLLYLKMKERD 263
           +I+G C  GK +++  ++ +MK+ +
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNE 260



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/87 (26%), Positives = 51/87 (58%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           ++ +++++   M +     D+ TYS L+ GL  S N + A  ++ +    G+ PD+ ++N
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            +++G+  AG++E+ L L+  M++  C
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGC 331


>gb|EMJ06165.1| hypothetical protein PRUPE_ppa002297mg [Prunus persica]
          Length = 690

 Score =  123 bits (309), Expect = 2e-26
 Identities = 55/88 (62%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           +R++DAY  VREML++  +PD++TYSLLMDGL Q +  +MALNLWHQAL++G +PD+TMH
Sbjct: 513 KRFSDAYVFVREMLEEGWKPDVITYSLLMDGLCQDRKIDMALNLWHQALDKGSEPDVTMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CSAGK EDAL LY +M   +C
Sbjct: 573 NIIIHGLCSAGKAEDALQLYFQMGRWNC 600



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 24/73 (32%), Positives = 47/73 (64%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L  +M + +  P++VTY+ LM+G ++ ++ E A  +W +    G++PD+  +N+ +
Sbjct: 587 DALQLYFQMGRWNCVPNLVTYNTLMEGFYKIRDCEKASEIWARIFKDGLQPDIISYNVTL 646

Query: 195 HGFCSAGKVEDAL 233
            GFCS  ++ DA+
Sbjct: 647 KGFCSCSRISDAI 659



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 24/84 (28%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQG-IKPDMTMHNIL 191
           DA ++  EM+++ + PD++ Y++L+DG F+  ++  A  +W + +    + P++  +N++
Sbjct: 202 DALEVFDEMVERGVSPDVMCYNILIDGFFRKGDSVNANEIWDRLVRDSEVYPNVVTYNVM 261

Query: 192 IHGFCSAGKVEDALLLYLKMKERD 263
           I G C  GK ++ L ++ +MK+ D
Sbjct: 262 IDGLCKCGKFDEGLEIWNRMKKND 285


>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+++AY LV+EML K  +P+++TYSLLM+GL Q K  +MALNLW QAL +G KPD+ MH
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CS+GKVEDAL LY +MK+R C
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKC 600



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/85 (29%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +3

Query: 12  ADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQAL-NQGIKPDMTMHNI 188
           +DA KL  EM ++ + PD+  Y++L+DG F+  +   A  +W + L    + P++  +N+
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 189 LIHGFCSAGKVEDALLLYLKMKERD 263
           +I+G C  GK +++  ++ +MK+ +
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNE 285



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/87 (26%), Positives = 51/87 (58%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           ++ +++++   M +     D+ TYS L+ GL  S N + A  ++ +    G+ PD+ ++N
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            +++G+  AG++E+ L L+  M++  C
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGC 356


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+++AY LV+EML K  +P+++TYSLLM+GL Q K  +MALNLW QAL +G KPD+ MH
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CS+GKVEDAL LY +MK+R C
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKC 600



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/73 (35%), Positives = 45/73 (61%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L  EM Q+   P++VT++ LM+G ++ ++ E A  +W   L  G +PD+  +NI +
Sbjct: 587 DALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITL 646

Query: 195 HGFCSAGKVEDAL 233
            G CS  ++ DA+
Sbjct: 647 KGLCSCHRISDAV 659



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/85 (29%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +3

Query: 12  ADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQAL-NQGIKPDMTMHNI 188
           +DA KL  EM ++ + PD+  Y++L+DG F+  +   A  +W + L    + P++  +N+
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260

Query: 189 LIHGFCSAGKVEDALLLYLKMKERD 263
           +I+G C  GK +++  ++ +MK+ +
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNE 285



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/87 (26%), Positives = 51/87 (58%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           ++ +++++   M +     D+ TYS L+ GL  S N + A  ++ +    G+ PD+ ++N
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            +++G+  AG++E+ L L+  M++  C
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGC 356


>gb|EOY07289.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao] gi|508715393|gb|EOY07290.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 685

 Score =  120 bits (301), Expect = 2e-25
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ +AY  ++EML+K  +PD++TYS LM GLFQ KN +MAL+LWH  L++  KPD+ MH
Sbjct: 513 ERFREAYCFLKEMLEKGWKPDMITYSSLMKGLFQGKNVDMALSLWHHVLDKAFKPDVIMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CS GKVEDAL LY KM+ R+C
Sbjct: 573 NIIIHGLCSVGKVEDALQLYSKMRRRNC 600



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 25/73 (34%), Positives = 49/73 (67%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L  +M +++  P++VT++ +M+GL+++   E A  +W +    G++PD+  +NI +
Sbjct: 587 DALQLYSKMRRRNCAPNLVTHNTIMEGLYKAGEYEKASEIWTRISTDGLQPDIISYNITL 646

Query: 195 HGFCSAGKVEDAL 233
            G CS GK++DA+
Sbjct: 647 KGLCSCGKIQDAV 659



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = +3

Query: 18  AYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQAL-NQGIKPDMTMHNILI 194
           A ++  EM+ + + PD++ Y+LL+DG F+ ++  MA  +W + L +    P+   +N++I
Sbjct: 203 AMEVFDEMVNRKVTPDVMCYNLLIDGFFKKRDFVMANEVWERLLEDSSAYPNSVTYNVMI 262

Query: 195 HGFCSAGKVEDALLLYLKMKERD 263
           +G C  GK ++ L L+ +MK+ +
Sbjct: 263 NGLCKCGKFDECLRLWERMKKNE 285


>gb|EXB89950.1| hypothetical protein L484_023602 [Morus notabilis]
          Length = 692

 Score =  118 bits (296), Expect = 7e-25
 Identities = 53/88 (60%), Positives = 71/88 (80%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER++DAY   +EML+K  +PD++TYSLL++GL Q K   MALNLW QAL++G+KPD+TMH
Sbjct: 514 ERFSDAYLFAKEMLEKGWKPDMITYSLLINGLSQGKEINMALNLWKQALDKGLKPDVTMH 573

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IH  C AGKVEDAL LY +M++ +C
Sbjct: 574 NIVIHKLCCAGKVEDALQLYFEMRQLNC 601



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/87 (26%), Positives = 50/87 (57%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           ++ + +++   M +   +PD+ TYS L+ GL ++KN + A  ++ + +  G+ PD+  +N
Sbjct: 271 KFNEGFEMWNRMKKNEREPDLFTYSSLIHGLCEAKNVDAAEQVYREMVESGVSPDVVTYN 330

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            +++GFC AG + +   ++  M    C
Sbjct: 331 AMLNGFCRAGWIREFFEVWEAMGRSGC 357



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/73 (34%), Positives = 47/73 (64%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L  EM Q +   ++VT++ LM+G F++++   A ++W + L  G++PD+  +NI +
Sbjct: 588 DALQLYFEMRQLNCVSNLVTHNTLMEGFFKARDCNKASHMWARILKCGLQPDIISYNITL 647

Query: 195 HGFCSAGKVEDAL 233
            G CS  ++ DA+
Sbjct: 648 KGLCSCNRLADAM 660



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/84 (27%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQG-IKPDMTMHNIL 191
           +A ++  EML++ + PD++ Y++L+DG  +  + E A  +W + L    + P+   +N++
Sbjct: 203 NALEVFDEMLERGVTPDVMCYNILIDGFLRKGDLEKAKQIWERLLEGSEVYPNAVTYNVM 262

Query: 192 IHGFCSAGKVEDALLLYLKMKERD 263
           I+G C  GK  +   ++ +MK+ +
Sbjct: 263 INGLCKCGKFNEGFEMWNRMKKNE 286


>ref|XP_004305146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Fragaria vesca subsp. vesca]
          Length = 696

 Score =  116 bits (291), Expect = 3e-24
 Identities = 53/87 (60%), Positives = 71/87 (81%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           RY+DAY  V+EML+K L+ D++TYSLL+DGL Q +  +MALNLW+QAL++G +PD+TM+N
Sbjct: 514 RYSDAYVFVKEMLEKGLKLDVITYSLLIDGLCQGRKIDMALNLWNQALDKGFEPDVTMYN 573

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
           I+IHG CSAGK E AL LY +M  R+C
Sbjct: 574 IMIHGLCSAGKAEGALQLYFQMGCRNC 600



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/90 (28%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQ-ALNQGIKPDMTMH 182
           +  DA ++  EM ++ + PD++ Y++L+DG F+  +   A  +W +  ++ G  P++  +
Sbjct: 199 KMGDALEVFDEMPERGVSPDVMCYNILIDGWFRRGDYAEAKEVWERLVMDSGAYPNVVSY 258

Query: 183 NILIHGFCSAGKVEDALLLYLKMK--ERDC 266
           N++I G C  G+  ++L ++ +MK  ER C
Sbjct: 259 NVMISGLCKCGRFGESLEIWDRMKRNERGC 288


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  116 bits (291), Expect = 3e-24
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+++AY  V+EML+K  +PD++T SLLMDGL Q K  EMALNLW QAL++G KPD+TM+
Sbjct: 515 ERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NIL+HG CS  K+EDAL LY  MK   C
Sbjct: 575 NILMHGLCSVCKLEDALQLYSHMKRSTC 602



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 43/73 (58%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L   M +    P++VT + LM+GL++ ++ E A  +W   L  G+ PD+  +NI I
Sbjct: 589 DALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITI 648

Query: 195 HGFCSAGKVEDAL 233
            G CS  ++ DA+
Sbjct: 649 KGLCSCSRISDAI 661



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/87 (26%), Positives = 52/87 (59%)
 Frame = +3

Query: 6   RYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHN 185
           R+ ++ ++   M +   + D+ TYS L+ GL ++ N + A+ ++ + +   +  D   HN
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHN 331

Query: 186 ILIHGFCSAGKVEDALLLYLKMKERDC 266
            +++GFC AGK++++  L++ M + +C
Sbjct: 332 AMLNGFCRAGKIKESFELWMVMGKENC 358



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 20/64 (31%), Positives = 42/64 (65%)
 Frame = +3

Query: 66  IVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILIHGFCSAGKVEDALLLYL 245
           +V+Y++L+ GLF++   E A+++W     +G +P+ T + +LIHG C  G++  AL ++ 
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420

Query: 246 KMKE 257
           + ++
Sbjct: 421 EAED 424


>ref|XP_006480966.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Citrus sinensis]
          Length = 686

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 70/88 (79%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ +AY  V+EML+K  +PD++TYSLL++GL QSK  ++AL LW Q L +G  PD+TM+
Sbjct: 508 ERFGEAYGFVKEMLEKGWKPDMITYSLLINGLCQSKKIDVALKLWCQFLQKGFTPDVTMY 567

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CSAGKVEDAL LY  MK+R+C
Sbjct: 568 NILIHGLCSAGKVEDALQLYSNMKKRNC 595



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 27/72 (37%), Positives = 48/72 (66%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           DA +L   M +++  P++VTY+ LMDGLF++ + + AL +W+  L + ++PD+  +NI +
Sbjct: 582 DALQLYSNMKKRNCVPNLVTYNTLMDGLFKTGDCDKALEIWNHILEERLRPDIISYNITL 641

Query: 195 HGFCSAGKVEDA 230
            G CS  ++ DA
Sbjct: 642 KGLCSCSRMSDA 653


>gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/88 (56%), Positives = 65/88 (73%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+++AY LV+EML+K  +P ++TYSLLM GL Q    EMAL LW+Q L++G KPD+ MH
Sbjct: 213 ERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMH 272

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CS GK + AL+LY  M   +C
Sbjct: 273 NILIHGLCSVGKTQHALMLYFDMNHWNC 300


>ref|XP_004246847.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Solanum lycopersicum]
          Length = 687

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ DAYKLV +MLQK   PD++TYSLLMDGL QSK  ++AL L  Q +++G KPD+TM 
Sbjct: 513 ERFGDAYKLVEDMLQKGWTPDMITYSLLMDGLCQSKKVDLALKLLSQIVSKGFKPDVTMV 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CSAG +++AL L+L M + +C
Sbjct: 573 NIIIHGLCSAGNLDNALQLFLSMSQWEC 600



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/76 (32%), Positives = 46/76 (60%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           +A +L   M Q    P++VTY+ LM+G +++++ + A  +W   L  G +PD+  +NI +
Sbjct: 587 NALQLFLSMSQWECLPNLVTYNTLMEGFYKARDCKNASAVWAFILKGGFQPDIISYNITL 646

Query: 195 HGFCSAGKVEDALLLY 242
            G CS  ++ DA+L +
Sbjct: 647 KGLCSCHRMSDAILFF 662


>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
           gi|449516585|ref|XP_004165327.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  110 bits (274), Expect = 3e-22
 Identities = 46/88 (52%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER++DAY  ++EML++ L+PD++TYSLL+DGL + +  +MALNLWHQ +N+ +KPD+ MH
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMH 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG C+A KV+ AL ++ +M++ +C
Sbjct: 573 NIIIHGLCTAQKVDVALEIFTQMRQVNC 600



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/72 (34%), Positives = 46/72 (63%)
 Frame = +3

Query: 18  AYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILIH 197
           A ++  +M Q +  PD+VT++ +M+GL+++ +   AL +W + L  G++PD+  +NI   
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647

Query: 198 GFCSAGKVEDAL 233
           G CS  +V DA+
Sbjct: 648 GLCSCARVSDAI 659



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/84 (28%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQ-GIKPDMTMHNIL 191
           DA +L  EM  + + PD++ Y++L+DG  +  +   A  +W + L +  + P +  +NI+
Sbjct: 202 DAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIM 261

Query: 192 IHGFCSAGKVEDALLLYLKMKERD 263
           I+G C  GK+++++ ++ +MK+ +
Sbjct: 262 INGLCKLGKLDESMEMWNRMKKNE 285


>ref|XP_006363056.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform X3 [Solanum tuberosum]
          Length = 634

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ DAYKLV +MLQK   PD++TYSLLMDGL QSK  ++AL L  Q +++G KPD+TM 
Sbjct: 513 ERFGDAYKLVEDMLQKGWTPDMITYSLLMDGLCQSKKVDLALKLLSQIVSKGFKPDVTMV 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CSAG +++AL L+L M + +C
Sbjct: 573 NIIIHGLCSAGNLDNALQLFLSMCQWEC 600


>ref|XP_006363054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform X1 [Solanum tuberosum]
           gi|565394822|ref|XP_006363055.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like isoform X2 [Solanum tuberosum]
          Length = 687

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ DAYKLV +MLQK   PD++TYSLLMDGL QSK  ++AL L  Q +++G KPD+TM 
Sbjct: 513 ERFGDAYKLVEDMLQKGWTPDMITYSLLMDGLCQSKKVDLALKLLSQIVSKGFKPDVTMV 572

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NI+IHG CSAG +++AL L+L M + +C
Sbjct: 573 NIIIHGLCSAGNLDNALQLFLSMCQWEC 600



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/76 (32%), Positives = 46/76 (60%)
 Frame = +3

Query: 15  DAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMHNILI 194
           +A +L   M Q    P++VTY+ LM+G +++++ + A  +W   L  G +PD+  +NI +
Sbjct: 587 NALQLFLSMCQWECLPNLVTYNTLMEGFYKARDCKNASAVWALILKGGFQPDIISYNITL 646

Query: 195 HGFCSAGKVEDALLLY 242
            G CS  ++ DA+L +
Sbjct: 647 KGLCSCHRMSDAILFF 662


>gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 376

 Score =  108 bits (269), Expect = 1e-21
 Identities = 48/88 (54%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+A+AY LV+EML+K  +P ++TYSLL+ GL Q    EMA+ LW+Q +++G+KPD+ MH
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMH 272

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CS GK + AL+LY  M   +C
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNC 300


>gb|AGW82673.1| pentatricopeptide repeat-containing protein, partial [Dorystaechas
           hastata]
          Length = 352

 Score =  107 bits (266), Expect = 2e-21
 Identities = 49/88 (55%), Positives = 65/88 (73%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ +AY LVREML+K  QP +VT S+L+ GL      +MALNLW+Q +N+G+KPD+ MH
Sbjct: 189 ERFGEAYDLVREMLEKGWQPGVVTISILIKGLCLGHKEDMALNLWNQGINKGLKPDVQMH 248

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG C+AGK + AL +YL M   +C
Sbjct: 249 NILIHGLCTAGKTQLALSIYLDMNHFNC 276


>gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  107 bits (266), Expect = 2e-21
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+A+AY LV+EML+K   P ++TYSLL+ GL Q    EMAL LW+Q +++G KPD+ MH
Sbjct: 213 ERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMH 272

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CS GK E A  LY  M   +C
Sbjct: 273 NILIHGLCSVGKTEHASELYFDMNHWNC 300


>gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 376

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+ +AY LV+EML+K L P ++TYSLLM GL      EMAL LW+Q   +G KPD+ MH
Sbjct: 213 ERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMH 272

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CS GK + AL LYL M   +C
Sbjct: 273 NILIHGLCSVGKTQLALSLYLDMNRWNC 300


>gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/88 (55%), Positives = 64/88 (72%)
 Frame = +3

Query: 3   ERYADAYKLVREMLQKHLQPDIVTYSLLMDGLFQSKNTEMALNLWHQALNQGIKPDMTMH 182
           ER+A+AY LV+EML+K  +P ++TYSLLM GL Q    EMAL LW+Q ++ G+KPD+ M 
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQML 272

Query: 183 NILIHGFCSAGKVEDALLLYLKMKERDC 266
           NILIHG CS GK + AL+LY  M   +C
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNC 300