BLASTX nr result
ID: Rheum21_contig00033516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00033516
(401 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutr... 83 4e-14
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus... 80 3e-13
ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t... 80 4e-13
gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis] 77 3e-12
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [S... 66 5e-09
gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobro... 65 9e-09
ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
emb|CBI41122.3| unnamed protein product [Vitis vinifera] 62 1e-07
emb|CBI23560.3| unnamed protein product [Vitis vinifera] 62 1e-07
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 62 1e-07
>ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 521
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGACGLHS ELG+ AA+ + LE DHP+I+S L ++ GE+ +WN V++LR TMKE+
Sbjct: 446 LLGACGLHSSLELGKFAAKELDKLESDHPAIFSTLSRIHGERGVWNSVLKLRKTMKEKGV 505
Query: 220 KKQKAGSWIS*AQ 182
+KQ AGSW+ AQ
Sbjct: 506 QKQNAGSWVESAQ 518
>ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cicer arietinum]
Length = 527
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACGLHS+ ELG AAE I LE +HP YS+L K+ GEK +W+ V ELR MKER
Sbjct: 458 LLAACGLHSNLELGEYAAERIRRLESNHPVSYSMLSKIQGEKGIWSSVNELREKMKERGI 517
Query: 220 KKQKAGSWI 194
KKQKA SW+
Sbjct: 518 KKQKAISWL 526
>ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutrema salsugineum]
gi|557091104|gb|ESQ31751.1| hypothetical protein
EUTSA_v10005291mg [Eutrema salsugineum]
Length = 514
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACGLHS ELG AAE IS L R+HP+ Y VL ++ GEK W V+ELR MK+ +A
Sbjct: 442 LLRACGLHSCLELGEVAAEGISRLRREHPAAYDVLCRVHGEKGDWTSVMELRRLMKKTKA 501
Query: 220 KKQKAGSWI 194
KKQ A SWI
Sbjct: 502 KKQDASSWI 510
>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 531
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/67 (61%), Positives = 48/67 (71%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACGLHS+ E+G AAE I LE DHP YS+L K+ GEK +W+ V ELR MKER+
Sbjct: 461 LLAACGLHSNLEIGVYAAERIRKLESDHPVSYSILSKIQGEKGIWSSVNELRDMMKERQV 520
Query: 220 KKQKAGS 200
KKQKA S
Sbjct: 521 KKQKASS 527
>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 529
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGACGLHS ELG AA I LE DHP++YSVL K+ G+K + + + L MK+ RA
Sbjct: 455 LLGACGLHSCLELGEIAANGIYTLEHDHPAVYSVLSKIYGDKGVCSDITGLDKLMKKWRA 514
Query: 220 KKQKAGSWI 194
KQKAGSWI
Sbjct: 515 TKQKAGSWI 523
>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
Length = 561
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACG+HS+ ELG AAE I LE +HP YS+L K+ GEK +W+ V ELR MK ++
Sbjct: 492 LLAACGMHSNLELGEYAAERIRKLESNHPVSYSILSKIQGEKGIWSSVNELRDLMKVKQI 551
Query: 220 KKQKAGSWI 194
+KQKA SW+
Sbjct: 552 RKQKAISWV 560
>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 607
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACGLHS+ ELG AAE I LE HP YSVL K+ GEK +W+ V ELR TMKER
Sbjct: 443 LLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGI 502
Query: 220 KKQKAG 203
KKQ G
Sbjct: 503 KKQTPG 508
>gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis]
Length = 522
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LL ACGLHS E+G AAE + L+ +H +YS+L K+ GEK W +ELR MK +R
Sbjct: 447 LLAACGLHSSLEVGEFAAEGMKKLKNEHRVVYSMLSKIHGEKGSWTIAIELREMMKRKRV 506
Query: 220 KKQKAGSWI 194
KQ AGSW+
Sbjct: 507 WKQNAGSWV 515
>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 630
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGACGLHS ELG AA I LE DHP++YSVL K+ G+K + + + L MK+ RA
Sbjct: 455 LLGACGLHSCLELGEIAANGIYTLEHDHPAVYSVLSKIYGDKGVCSDITGLDKLMKKWRA 514
Query: 220 KKQKA 206
KQKA
Sbjct: 515 TKQKA 519
>ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein
SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLG+C +H D EL R AAE + L+ +H Y++L M E MWN+ E+++ MK R+
Sbjct: 689 LLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKV 748
Query: 220 KKQKAGSWI 194
+K A SW+
Sbjct: 749 QKNPAYSWV 757
>gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
9 isoform 1 [Theobroma cacao]
Length = 657
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H++ EL R AAEA+ +LE + + Y +L+ M +K W+ VE+R M+ +
Sbjct: 584 LLGACRVHNNVELARVAAEALMSLEPESSAPYILLYNMYADKGQWDDAVEVREMMERNKV 643
Query: 220 KKQKAGSWI 194
+KQ A SWI
Sbjct: 644 RKQAAYSWI 652
>ref|XP_004239299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum lycopersicum]
Length = 829
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC LH++ +LG++AA+ + LE + Y +L M + WN V +R TMK++R
Sbjct: 632 LLGACVLHNEVDLGKTAAQCVLELEPQDETTYVLLSNMYATSKRWNNVAFVRKTMKKKRL 691
Query: 220 KKQKAGSWI 194
KK+ SW+
Sbjct: 692 KKEPGLSWV 700
>ref|XP_006363265.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Solanum tuberosum]
Length = 830
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC LH++ +LG++AA+ + LE + Y +L M + WN V +R TMK++R
Sbjct: 633 LLGACVLHNEVDLGKTAAQRVLELEPQDEATYVLLSNMYATSKRWNNVAFVRKTMKKKRL 692
Query: 220 KKQKAGSWI 194
KK+ SW+
Sbjct: 693 KKEPGLSWV 701
>ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Solanum tuberosum]
Length = 617
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLG C +H + ELGR AAE + L+ P+ Y +L + G MW V ++R M ER
Sbjct: 497 LLGVCRIHGNVELGRMAAELLIELDPQSPAAYLLLSSIYGVLGMWENVEKVRQLMNERHV 556
Query: 220 KKQKAGSW--IS*AQFPLYSGSGSGSFDRQG 134
+K++A SW I P + + + +R G
Sbjct: 557 RKEQAVSWLEIEHKMLPYFGCNKLNTLERDG 587
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + ELGR AAE I E D P+ Y +L + W VV++R +MKER
Sbjct: 612 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 671
Query: 220 KKQKAGSWI 194
K+ SWI
Sbjct: 672 IKEAGCSWI 680
>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + ELGR AAE I E D P+ Y +L + W VV++R +MKER
Sbjct: 432 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 491
Query: 220 KKQKAGSWI 194
K+ SWI
Sbjct: 492 IKEAGCSWI 500
>ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + EL + AA+ + L+ +H YSVL M E WN+ ++R+ MK R+
Sbjct: 653 LLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKV 712
Query: 220 KKQKAGSWI 194
+K A SW+
Sbjct: 713 QKNPAYSWV 721
>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + ELGR AAE I E D P+ Y +L + W VV++R +MKER
Sbjct: 437 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 496
Query: 220 KKQKAGSWI 194
K+ SWI
Sbjct: 497 IKEAGCSWI 505
>emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + ELGR AAE I E D P+ Y +L + W VV++R +MKER
Sbjct: 300 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 359
Query: 220 KKQKAGSWI 194
K+ SWI
Sbjct: 360 IKEAGCSWI 368
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 40/69 (57%)
Frame = -2
Query: 400 LLGACGLHSDFELGRSAAEAISNLERDHPSIYSVLFKMLGEKEMWNKVVELRSTMKERRA 221
LLGAC +H + ELGR AAE I E D P+ Y +L + W VV++R +MKER
Sbjct: 630 LLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 689
Query: 220 KKQKAGSWI 194
K+ SWI
Sbjct: 690 IKEAGCSWI 698