BLASTX nr result

ID: Rheum21_contig00033474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00033474
         (326 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556021.2| PREDICTED: WD repeat-containing protein 25-l...    62   1e-07
ref|XP_006452113.1| hypothetical protein CICLE_v10008307mg [Citr...    61   1e-07
ref|XP_002533742.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|5...    60   3e-07
gb|EMJ15873.1| hypothetical protein PRUPE_ppa021862mg [Prunus pe...    57   2e-06
gb|EOY12662.1| Transducin/WD40 repeat-like superfamily protein i...    57   3e-06
ref|XP_006359312.1| PREDICTED: WD repeat-containing protein 25-l...    55   1e-05

>ref|XP_003556021.2| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 424

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCSDHSNRPTKRPKAELTPPIPKPGPICRSMPPS-NPQSGAPVP 104
           MDLLCNAYSN SD+E+          KR +  L+ P P    +  S PPS N Q+ AP+ 
Sbjct: 1   MDLLCNAYSNASDDEEE------EQPKRQRVSLSSPNPPKRHLPLSSPPSFNNQTQAPML 54

Query: 103 GRYVSKRERAL 71
           GRY+SKR+RAL
Sbjct: 55  GRYISKRQRAL 65


>ref|XP_006452113.1| hypothetical protein CICLE_v10008307mg [Citrus clementina]
           gi|568842660|ref|XP_006475254.1| PREDICTED: WD
           repeat-containing protein 25-like [Citrus sinensis]
           gi|557555339|gb|ESR65353.1| hypothetical protein
           CICLE_v10008307mg [Citrus clementina]
          Length = 442

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEE-DSCSDHS-------NRPTKRPKAELTPPIPKPGPICRS-MPPSN 128
           MDLLCNAYSN SD+E +  S H        + P+KRP+ +   P  KP P+ RS    S 
Sbjct: 1   MDLLCNAYSNTSDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRSNQQHSG 60

Query: 127 PQSGAPVPGRYVSKRERAL 71
            ++ A V GRY+SKRERAL
Sbjct: 61  LRTEASVAGRYMSKRERAL 79


>ref|XP_002533742.1| conserved hypothetical protein [Ricinus communis]
           gi|223526348|gb|EEF28645.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCS---DHSNRPTKRPKAELTPPIPKPGPICRSMPPSNPQSGAP 110
           MDLLCNAYSN SDEE       D  ++P   P  +L   +P P    R+  P    S AP
Sbjct: 1   MDLLCNAYSNSSDEEPETVPRIDPQSKPLLGPH-QLNTVLPPPKRPKRNNNPLQFSSEAP 59

Query: 109 VPGRYVSKRERAL 71
           +PGRY+SKRERAL
Sbjct: 60  IPGRYISKRERAL 72


>ref|XP_002319259.1| predicted protein [Populus trichocarpa]
           gi|566154714|ref|XP_006370579.1| hypothetical protein
           POPTR_0001s43980g [Populus trichocarpa]
           gi|550349785|gb|ERP67148.1| hypothetical protein
           POPTR_0001s43980g [Populus trichocarpa]
          Length = 408

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/72 (52%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCSDHS-NRPTKRPKAELTPPIPKPGPICRSMPPS-NPQSGAPV 107
           MDLLC+AYSN SDEE      S ++P   P  E  P IP P    +   PS N ++ APV
Sbjct: 1   MDLLCHAYSNSSDEEPEPEPESESKPEYGP--EFRPFIPPPPKRFKPETPSQNFRTEAPV 58

Query: 106 PGRYVSKRERAL 71
           PGRY+SKRERAL
Sbjct: 59  PGRYISKRERAL 70


>gb|EMJ15873.1| hypothetical protein PRUPE_ppa021862mg [Prunus persica]
          Length = 410

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCSDHSNRPTKRPKAELTPPIP---KPGPICRSMPPSNPQSG-- 116
           MDLLCNAYSN SD E+   + + +P  RP+   TPP     KP          NP SG  
Sbjct: 1   MDLLCNAYSNASDNEEEEEESAKQP--RPE-NFTPPNSKRLKPVNPFTHTKTQNPLSGST 57

Query: 115 --------APVPGRYVSKRERAL 71
                   APVPGRYVSKRER+L
Sbjct: 58  QFPARHIEAPVPGRYVSKRERSL 80


>gb|EOY12662.1| Transducin/WD40 repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 432

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/79 (45%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCSD---------HSNRPTKRPKAELTPPIPKPGPICRSMPPSN 128
           MDLLC AYSN+SD+E              H  RP+KR K E   P P        M    
Sbjct: 1   MDLLCKAYSNISDDEPESEPEPKPVNYNYHPPRPSKRRKPEY--PFP--------MVDLQ 50

Query: 127 PQSGAPVPGRYVSKRERAL 71
            +  APVPGRY+SKRERAL
Sbjct: 51  KREEAPVPGRYISKRERAL 69


>ref|XP_006359312.1| PREDICTED: WD repeat-containing protein 25-like [Solanum tuberosum]
          Length = 436

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -2

Query: 280 MDLLCNAYSNVSDEEDSCSD-HSNRPT----KRPKAELTPPIPKPGPICRSMPPSNPQSG 116
           MDLLC  Y   SDEED     H  RP     KR K E    +    P+ +S P +N  + 
Sbjct: 1   MDLLCKVYGGTSDEEDDNGGIHLQRPILPPPKRAKFENFHQVSNHLPLYKSNPSANLPAQ 60

Query: 115 APVPGRYVSKRERA 74
           A +PGRY+SKRERA
Sbjct: 61  ASLPGRYISKRERA 74


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