BLASTX nr result
ID: Rheum21_contig00033470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00033470 (322 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264508.1| PREDICTED: photosystem II reaction center W ... 69 5e-10 gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 67 2e-09 emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem ... 65 7e-09 ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Caps... 65 1e-08 gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN404... 64 2e-08 gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK213... 64 2e-08 ref|NP_180615.1| photosystem II reaction center W protein [Arabi... 64 2e-08 gb|EOY11052.1| Photosystem II reaction center W protein, chlorop... 64 2e-08 gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe... 64 3e-08 ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 63 3e-08 ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr... 63 5e-08 ref|XP_006487787.1| PREDICTED: photosystem II reaction center W ... 62 6e-08 ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab... 62 6e-08 ref|XP_002531284.1| Photosystem II reaction center W protein, ch... 62 6e-08 gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao] 62 8e-08 ref|XP_004247215.1| PREDICTED: photosystem II reaction center W ... 62 8e-08 ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 62 8e-08 gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK261... 62 8e-08 ref|XP_006644788.1| PREDICTED: photosystem II reaction center W ... 62 1e-07 ref|XP_004961567.1| PREDICTED: photosystem II reaction center W ... 62 1e-07 >ref|XP_002264508.1| PREDICTED: photosystem II reaction center W protein, chloroplastic [Vitis vinifera] gi|296087925|emb|CBI35208.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 69.3 bits (168), Expect = 5e-10 Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 3/107 (2%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGPLV---ATAVALHGSMMDKTNVAMALV 179 I SPV LP A G RV C +E++ GS G + A+ +A ++ AMALV Sbjct: 26 ISSPVLGLPAMAKKG--RVRCMSEEKPCGSDMGSSISMGASLMAAAAAVAASAGPAMALV 83 Query: 180 DDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 D+R+STE WIL GVFGLIW LY + ++EDDE Sbjct: 84 DERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATLEEDDE 130 >gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa] Length = 133 Score = 67.0 bits (162), Expect = 2e-09 Identities = 47/106 (44%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 182 + +PV LP G K V C E KQG S G V A A A ++M +N AMALVD Sbjct: 26 VSAPVLGLP-PMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVM--SNPAMALVD 82 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 DRMSTE WIL+GVFGLIWT Y + +++ ED+E Sbjct: 83 DRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDEDEE 128 >emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem II reaction center [Arabidopsis thaliana] Length = 133 Score = 65.5 bits (158), Expect = 7e-09 Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 2/106 (1%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 182 I +PV LP G K V C E KQG SV G V A A A ++M +N AMALVD Sbjct: 26 ISAPVLGLP-PMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVM--SNPAMALVD 82 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +RMSTE WIL GVFGLIWT + + ++++ED+E Sbjct: 83 ERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFAYTSSLEEDEE 128 >ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Capsella rubella] gi|482564464|gb|EOA28654.1| hypothetical protein CARUB_v10024876mg [Capsella rubella] Length = 133 Score = 64.7 bits (156), Expect = 1e-08 Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 182 + +PV LP G K V C E KQG S G V A A A ++M +N AMALVD Sbjct: 26 VSAPVLGLP-PMGKKKGGVRCSMETKQGNVSAMGAGVSAAATAALSAVM--SNPAMALVD 82 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +RMSTE WIL GVFGLIWT Y ++++ED+E Sbjct: 83 ERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEEDEE 128 >gb|ACN40147.1| unknown [Picea sitchensis] gi|224285390|gb|ACN40418.1| unknown [Picea sitchensis] Length = 149 Score = 64.3 bits (155), Expect = 2e-08 Identities = 36/73 (49%), Positives = 44/73 (60%) Frame = +3 Query: 102 AGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTL 281 A PL+A A AL S T A ALVD+R+STE WILVGVF LIW L Sbjct: 76 AAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWIL 131 Query: 282 YVSTYTNVQEDDE 320 Y +TY+NV+ED++ Sbjct: 132 YFTTYSNVKEDED 144 >gb|ABK21312.1| unknown [Picea sitchensis] gi|116779706|gb|ABK21398.1| unknown [Picea sitchensis] gi|116790469|gb|ABK25626.1| unknown [Picea sitchensis] gi|116791712|gb|ABK26081.1| unknown [Picea sitchensis] gi|116791741|gb|ABK26091.1| unknown [Picea sitchensis] gi|148907724|gb|ABR16989.1| unknown [Picea sitchensis] gi|224285778|gb|ACN40604.1| unknown [Picea sitchensis] Length = 146 Score = 64.3 bits (155), Expect = 2e-08 Identities = 36/73 (49%), Positives = 44/73 (60%) Frame = +3 Query: 102 AGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTL 281 A PL+A A AL S T A ALVD+R+STE WILVGVF LIW L Sbjct: 73 AAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWIL 128 Query: 282 YVSTYTNVQEDDE 320 Y +TY+NV+ED++ Sbjct: 129 YFTTYSNVKEDED 141 >ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana] gi|122064936|sp|Q39194.2|PSBW_ARATH RecName: Full=Photosystem II reaction center W protein, chloroplastic; AltName: Full=PSII 6.1 kDa protein; Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1 At2g30570 [Arabidopsis thaliana] gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8 [Arabidopsis thaliana] gi|1946362|gb|AAB63080.1| photosystem II reaction center 6.1KD protein [Arabidopsis thaliana] gi|21593002|gb|AAM64951.1| photosystem II reaction center 6.1KD protein [Arabidopsis thaliana] gi|23506075|gb|AAN28897.1| At2g30570/T6B20.8 [Arabidopsis thaliana] gi|330253315|gb|AEC08409.1| photosystem II reaction center W protein [Arabidopsis thaliana] Length = 133 Score = 64.3 bits (155), Expect = 2e-08 Identities = 47/106 (44%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 182 I +PV LP G K V C E KQG SV G V A A A ++M +N AMALVD Sbjct: 26 ISAPVLGLP-PMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVM--SNPAMALVD 82 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +RMSTE WIL GVFGLIWT + ++++ED+E Sbjct: 83 ERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLEEDEE 128 >gb|EOY11052.1| Photosystem II reaction center W protein, chloroplastic, putative [Theobroma cacao] Length = 135 Score = 63.9 bits (154), Expect = 2e-08 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Frame = +3 Query: 15 SPVAILPLAAGNGKRRVACKAEKQGAGSVAGP-LVATAVALHGSMMDKT-NVAMALVDDR 188 SPV LP+ A NG+ R + ++ + P +VA+ +A + M T AMALVD+R Sbjct: 27 SPVLGLPVMATNGRVRCTLEQKRSASSMSLNPSMVASLMAAAAAAMTTTAGPAMALVDER 86 Query: 189 MSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +STE WIL G FGLIW LY ++++ED++ Sbjct: 87 LSTEGTGLPFGLSNNLLGWILFGAFGLIWALYFIYVSSLEEDED 130 >gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica] Length = 165 Score = 63.5 bits (153), Expect = 3e-08 Identities = 38/100 (38%), Positives = 53/100 (53%) Frame = +3 Query: 21 VAILPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTE 200 V LP A GK + + +K+ + S G + A A + M ++ AMALVDDR+STE Sbjct: 63 VLALPSLARKGKVGCSMEGKKESSNSKMGKGASLAAAAMAATM--SSPAMALVDDRLSTE 120 Query: 201 XXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 WIL GVFGLIWT Y ++++ED+E Sbjct: 121 GTGLPFGLSNNILGWILFGVFGLIWTFYFIYTSSLEEDEE 160 >ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum] gi|557111329|gb|ESQ51613.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum] Length = 133 Score = 63.2 bits (152), Expect = 3e-08 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +3 Query: 9 IKSPVAILP-LAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDD 185 + +PV LP ++ G R + + +++ V + A A A ++M +N AMALVDD Sbjct: 26 VSTPVLGLPPMSKRKGGVRCSMEKKQENVSVVGAGVSAAATAALTAVM--SNPAMALVDD 83 Query: 186 RMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 RMSTE WIL GVFGLIWT Y ++++ED+E Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEEDEE 128 >ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina] gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Citrus sinensis] gi|557546174|gb|ESR57152.1| hypothetical protein CICLE_v10024455mg [Citrus clementina] Length = 135 Score = 62.8 bits (151), Expect = 5e-08 Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Frame = +3 Query: 15 SPVAILPLAAGNGKRRVAC--KAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDDR 188 SPV LP A GK R + K KQ + + G + A + M ++ AMALVD+R Sbjct: 29 SPVLGLPAMAVKGKVRCSMEEKPSKQESKTNVGMSASLLAAACAATM--SSPAMALVDER 86 Query: 189 MSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 MSTE WIL+GVFGLIW LY+ +++ ED+E Sbjct: 87 MSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPYASSLDEDEE 130 >ref|XP_006487787.1| PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Citrus sinensis] Length = 137 Score = 62.4 bits (150), Expect = 6e-08 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 5/110 (4%) Frame = +3 Query: 6 TIKSPVAILPLAAGNGKRRVACKAEKQGAGSVAGP-----LVATAVALHGSMMDKTNVAM 170 T SPV +P A + RV C E++ + +G +VA+ +A ++ AM Sbjct: 24 THASPVYGMP-AMATTRGRVRCSLEEKAPAAASGKSSKASMVASLMAAAAALSTAAGPAM 82 Query: 171 ALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 ALVD+RM+TE WIL GVFGLIW LY +++ED+E Sbjct: 83 ALVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYTGDLEEDEE 132 >ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata] Length = 133 Score = 62.4 bits (150), Expect = 6e-08 Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Frame = +3 Query: 9 IKSPVAILPLAAGNGKRRVACKAE-KQGAGSVAGPLV-ATAVALHGSMMDKTNVAMALVD 182 + +PV LP G K V C E KQG S G V A A A ++M +N AMALVD Sbjct: 26 VSAPVLGLP-PMGKKKGGVRCSMETKQGNVSAMGAGVSAAATAALTAVM--SNPAMALVD 82 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +RMSTE WIL GVFGLIWT + ++++ED+E Sbjct: 83 ERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLEEDEE 128 >ref|XP_002531284.1| Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis] gi|223529117|gb|EEF31097.1| Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis] Length = 134 Score = 62.4 bits (150), Expect = 6e-08 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 3/105 (2%) Frame = +3 Query: 15 SPVAILPLAAGNGKRRVACKAEKQGAG---SVAGPLVATAVALHGSMMDKTNVAMALVDD 185 +P+ LP+ A G R V C E++ S+ +VA+ VA ++ AMALVD+ Sbjct: 26 TPILGLPVMATRGCR-VRCSIEEKAEAKDKSLNTSMVASMVAAASAVAATAGPAMALVDE 84 Query: 186 RMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 RMSTE WIL+GVF LIW+LY + + EDD+ Sbjct: 85 RMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDDD 129 >gb|EOX94570.1| Photosystem II reaction center W [Theobroma cacao] Length = 135 Score = 62.0 bits (149), Expect = 8e-08 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 3/107 (2%) Frame = +3 Query: 9 IKSPVAI-LPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKT--NVAMALV 179 + S VAI LP A GK V C EK+ + G V + +L + T + AMALV Sbjct: 26 VASSVAIGLPAMAKKGK--VMCSMEKKSSAEEKGSNVGMSASLLAAACAATMSSPAMALV 83 Query: 180 DDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 D+RM+TE WIL VFGLIW LY+ ++++ED+E Sbjct: 84 DERMTTEGTGLPFGLSNNILGWILFAVFGLIWALYIVYTSSLEEDEE 130 >ref|XP_004247215.1| PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum] Length = 132 Score = 62.0 bits (149), Expect = 8e-08 Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Frame = +3 Query: 15 SPVAILPLAAGNGKRRVACKAEKQGAGS----VAGPLVATAVALHGSMMDKTNVAMALVD 182 S V LP + GK V C E +G G + L+A AVA S + VAMALVD Sbjct: 28 SVVLGLPSMSKGGK--VKCSMEGKGKGESKLGMGESLMAAAVAASMS----SPVAMALVD 81 Query: 183 DRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 +RMSTE WIL+GVFGLIW+LY + + ED+E Sbjct: 82 ERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSLYTVYTSGLDEDEE 127 >ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor] gi|241930553|gb|EES03698.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor] Length = 126 Score = 62.0 bits (149), Expect = 8e-08 Identities = 34/87 (39%), Positives = 46/87 (52%) Frame = +3 Query: 60 RVACKAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXX 239 RV C K A A A+ +A G++ A+ALVD+RMSTE Sbjct: 35 RVRCSYAKDAAAVSAKAAGASLLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLL 94 Query: 240 XWILVGVFGLIWTLYVSTYTNVQEDDE 320 WIL+GVFGLIW+LY +++ ED+E Sbjct: 95 GWILLGVFGLIWSLYTVYTSDLDEDEE 121 >gb|ABK21433.1| unknown [Picea sitchensis] gi|116791862|gb|ABK26137.1| unknown [Picea sitchensis] gi|116791959|gb|ABK26178.1| unknown [Picea sitchensis] gi|148906058|gb|ABR16188.1| unknown [Picea sitchensis] gi|148907944|gb|ABR17092.1| unknown [Picea sitchensis] gi|224284792|gb|ACN40126.1| unknown [Picea sitchensis] gi|224285006|gb|ACN40232.1| unknown [Picea sitchensis] Length = 146 Score = 62.0 bits (149), Expect = 8e-08 Identities = 35/73 (47%), Positives = 43/73 (58%) Frame = +3 Query: 102 AGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXXXWILVGVFGLIWTL 281 A PL+A A AL S T A ALVD+R+STE WILVGVF LIW L Sbjct: 73 AAPLMAVAAALTVS----TKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWIL 128 Query: 282 YVSTYTNVQEDDE 320 Y +TY+ V+ED++ Sbjct: 129 YFTTYSGVKEDED 141 >ref|XP_006644788.1| PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Oryza brachyantha] Length = 128 Score = 61.6 bits (148), Expect = 1e-07 Identities = 37/97 (38%), Positives = 48/97 (49%) Frame = +3 Query: 30 LPLAAGNGKRRVACKAEKQGAGSVAGPLVATAVALHGSMMDKTNVAMALVDDRMSTEXXX 209 LP RV C K G + + V A A +M AMALVD+RMSTE Sbjct: 26 LPQMRARRSERVRCSYSKDGKEASSPAAVKGAGASLLAMAATAAPAMALVDERMSTEGTG 85 Query: 210 XXXXXXXXXXXWILVGVFGLIWTLYVSTYTNVQEDDE 320 WIL+GVFGLIW+LY ++++ED+E Sbjct: 86 LSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEE 122 >ref|XP_004961567.1| PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Setaria italica] Length = 204 Score = 61.6 bits (148), Expect = 1e-07 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Frame = +3 Query: 66 ACKAEKQGAGSVAGPLVATAVALHG--SMMDKTNVAMALVDDRMSTEXXXXXXXXXXXXX 239 AC ++ G+G A A A +L S M ++ A+ALVD+RMSTE Sbjct: 112 ACSRQQDGSGKGAAAPAAGASSLLAVASAMTTSSPALALVDERMSTEGTGLSLGLSNNLL 171 Query: 240 XWILVGVFGLIWTLYVSTYTNVQEDDE 320 WIL+GVFGLIW+LY + YT+ ++DE Sbjct: 172 GWILLGVFGLIWSLY-TVYTSTLDEDE 197