BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032976
         (256 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...   100   2e-19
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...    99   7e-19
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...    99   7e-19
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...    97   2e-18
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par...    97   2e-18
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par...    97   2e-18
ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III s...    97   2e-18
ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III s...    96   4e-18
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...    96   6e-18
ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III s...    95   1e-17
ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III s...    94   1e-17
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...    94   1e-17
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...    94   2e-17
ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [S...    93   3e-17
gb|EEE59224.1| hypothetical protein OsJ_11195 [Oryza sativa Japo...    93   3e-17
gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypepti...    93   3e-17
ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group] g...    93   3e-17
gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonic...    93   3e-17
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...    93   4e-17
gb|EEC75437.1| hypothetical protein OsI_11967 [Oryza sativa Indi...    92   5e-17

>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Solanum lycopersicum]
          Length = 1183

 Score =  100 bits (249), Expect = 2e-19
 Identities = 46/64 (71%), Positives = 58/64 (90%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEK+Y+++N F++KVPI VVMKAMGMES+QE+VQM+GRDPRFSALLLPSI ECA  K+
Sbjct: 258 MEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKL 317

Query: 12  ITRQ 1
            T+Q
Sbjct: 318 YTQQ 321


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X1 [Solanum tuberosum]
           gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC2-like isoform X2 [Solanum
           tuberosum]
          Length = 1153

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 45/63 (71%), Positives = 57/63 (90%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEK+Y+++N F++KVPI VVMKAMGMES+QE+VQM+GRDPRFSALLLPSI ECA  K+
Sbjct: 228 MEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKL 287

Query: 12  ITR 4
            T+
Sbjct: 288 YTQ 290


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1142

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 45/65 (69%), Positives = 58/65 (89%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           V+EKEKI++Q+NQF SK+PI +VMKAMGMES+QE+VQMVGR+PR+SALLLPS+ ECA   
Sbjct: 215 VMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHG 274

Query: 15  VITRQ 1
           + T+Q
Sbjct: 275 IYTQQ 279


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Solanum tuberosum]
          Length = 1151

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 44/63 (69%), Positives = 57/63 (90%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEK+Y+++N F++KVPI VVMKAMGMES+QE+VQM+GRDPR+SALLLPSI ECA  K+
Sbjct: 231 MEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECADLKL 290

Query: 12  ITR 4
            T+
Sbjct: 291 YTQ 293


>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1034

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/65 (70%), Positives = 56/65 (86%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           ++EKEK+Y+ +NQF  K+PI VVMKAMGMES+QE+VQMVGRDPR+SALLLPSI ECA   
Sbjct: 229 LMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHG 288

Query: 15  VITRQ 1
           V T+Q
Sbjct: 289 VYTQQ 293


>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1035

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/65 (70%), Positives = 56/65 (86%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           ++EKEK+Y+ +NQF  K+PI VVMKAMGMES+QE+VQMVGRDPR+SALLLPSI ECA   
Sbjct: 229 LMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECASHG 288

Query: 15  VITRQ 1
           V T+Q
Sbjct: 289 VYTQQ 293


>ref|XP_004249177.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Solanum lycopersicum]
          Length = 1149

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 44/63 (69%), Positives = 57/63 (90%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEK+Y+++N F++KVPI VVMKAMGMES+QE+VQM+GRDPR+SALLLPSI ECA  K+
Sbjct: 230 MEKEKVYLELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECADLKL 289

Query: 12  ITR 4
            T+
Sbjct: 290 YTQ 292


>ref|XP_004951189.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X1 [Setaria italica]
          Length = 1154

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           L+KEKIY+Q+NQF   +PI VVMKAMGMES+QE+VQMVGRDPR+  LL PSI ECA E++
Sbjct: 228 LDKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMVGRDPRYGDLLFPSIQECASERI 287

Query: 12  ITRQ 1
            T+Q
Sbjct: 288 YTQQ 291


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 55/64 (85%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EK+KIY+++NQF  K+PI VVMKAMGM S+QE+VQMVGRDPR+ ALL+PSI ECA E +
Sbjct: 243 MEKQKIYLELNQFSKKIPIMVVMKAMGMTSDQEVVQMVGRDPRYGALLMPSIEECAKEGI 302

Query: 12  ITRQ 1
            T++
Sbjct: 303 YTKE 306


>ref|XP_006656544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Oryza
           brachyantha]
          Length = 1164

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 43/64 (67%), Positives = 54/64 (84%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+VQMVGRDPR+  LL PSI ECA E++
Sbjct: 238 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVVQMVGRDPRYGDLLYPSIQECAFERI 297

Query: 12  ITRQ 1
            T++
Sbjct: 298 YTQK 301


>ref|XP_006583558.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X2 [Glycine max]
          Length = 1021

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           V+EKEK+++Q+N+F  KVP+ VVMKAMGMES+QE+ QMVGRDPR+S LLLPSI EC   K
Sbjct: 240 VMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMVGRDPRYSFLLLPSIEECTKCK 299

Query: 15  VITRQ 1
           V TR+
Sbjct: 300 VYTRE 304


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like
           isoform X1 [Glycine max]
          Length = 1165

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           V+EKEK+++Q+N+F  KVP+ VVMKAMGMES+QE+ QMVGRDPR+S LLLPSI EC   K
Sbjct: 240 VMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQMVGRDPRYSFLLLPSIEECTKCK 299

Query: 15  VITRQ 1
           V TR+
Sbjct: 300 VYTRE 304


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEK+Y+ +NQF  K+PI VV+KAMGMES+QE+VQMVGRDPR+SALLLPSI ECA   +
Sbjct: 232 MEKEKMYLCLNQFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSI 291

Query: 12  ITRQ 1
            T+Q
Sbjct: 292 YTQQ 295


>ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor]
           gi|241914906|gb|EER88050.1| hypothetical protein
           SORBIDRAFT_10g006995 [Sorghum bicolor]
          Length = 1137

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/65 (66%), Positives = 53/65 (81%)
 Frame = -2

Query: 195 VLEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEK 16
           +++K KIY+Q+NQF   +PI VVMKAMGMES+QE VQMVGRDPR+  LL PSI ECA E+
Sbjct: 211 LMDKGKIYLQLNQFTKPIPIIVVMKAMGMESDQEAVQMVGRDPRYGDLLFPSIQECASER 270

Query: 15  VITRQ 1
           + TRQ
Sbjct: 271 IYTRQ 275


>gb|EEE59224.1| hypothetical protein OsJ_11195 [Oryza sativa Japonica Group]
          Length = 1115

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+ QMVGRDPR+  LL PSI ECA E++
Sbjct: 290 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERI 349

Query: 12  ITRQ 1
            T++
Sbjct: 350 YTQK 353


>gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 1039

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+ QMVGRDPR+  LL PSI ECA E++
Sbjct: 230 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERI 289

Query: 12  ITRQ 1
            T++
Sbjct: 290 YTQK 293


>ref|NP_001050323.1| Os03g0403100 [Oryza sativa Japonica Group]
           gi|108708688|gb|ABF96483.1| DNA-directed RNA polymerase
           III 130 kDa polypeptide, putative, expressed [Oryza
           sativa Japonica Group] gi|113548794|dbj|BAF12237.1|
           Os03g0403100 [Oryza sativa Japonica Group]
          Length = 1155

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+ QMVGRDPR+  LL PSI ECA E++
Sbjct: 230 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERI 289

Query: 12  ITRQ 1
            T++
Sbjct: 290 YTQK 293


>gb|AAP03366.1| putative RNA polymerase III [Oryza sativa Japonica Group]
          Length = 1174

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/64 (65%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+ QMVGRDPR+  LL PSI ECA E++
Sbjct: 249 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERI 308

Query: 12  ITRQ 1
            T++
Sbjct: 309 YTQK 312


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
           gi|557534507|gb|ESR45625.1| hypothetical protein
           CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/64 (67%), Positives = 55/64 (85%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EK K+Y+ +NQF  K+PI VVMKAMGMES+QE+VQMVGRDPR+SALLLPSI ECA+  +
Sbjct: 226 MEKGKMYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDI 285

Query: 12  ITRQ 1
            T++
Sbjct: 286 YTQE 289


>gb|EEC75437.1| hypothetical protein OsI_11967 [Oryza sativa Indica Group]
          Length = 1117

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = -2

Query: 192 LEKEKIYVQINQFQSKVPIFVVMKAMGMESEQEIVQMVGRDPRFSALLLPSIAECAHEKV 13
           +EKEKIY+Q+NQF   +PI VVMKAMGMES+QE+ QMVGRDPR+  LL PSI ECA E++
Sbjct: 292 MEKEKIYLQLNQFTKPIPIIVVMKAMGMESDQEVAQMVGRDPRYGDLLYPSIQECAFERI 351

Query: 12  IT 7
            T
Sbjct: 352 YT 353