BLASTX nr result
ID: Rheum21_contig00032951
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032951
(202 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006370659.1| hypothetical protein POPTR_0001s44620g [Popu... 127 2e-27
ref|XP_004500046.1| PREDICTED: tryptophan synthase beta chain 2,... 126 3e-27
gb|ESW18398.1| hypothetical protein PHAVU_006G037600g [Phaseolus... 124 1e-26
gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus pe... 123 2e-26
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 123 3e-26
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 123 3e-26
ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2,... 122 4e-26
ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago tru... 122 5e-26
gb|AFK35529.1| unknown [Lotus japonicus] 122 6e-26
ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,... 121 8e-26
emb|CBI23954.3| unnamed protein product [Vitis vinifera] 121 1e-25
ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,... 121 1e-25
sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta c... 120 2e-25
gb|AFW57447.1| orange pericarp2 [Zea mays] 120 2e-25
gb|EXB50262.1| Tryptophan synthase beta chain 2 [Morus notabilis] 120 2e-25
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch... 120 2e-25
ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ri... 120 2e-25
ref|XP_004972911.1| PREDICTED: tryptophan synthase beta chain 2,... 119 4e-25
ref|XP_002443820.1| hypothetical protein SORBIDRAFT_07g002770 [S... 119 4e-25
gb|AFW61277.1| orange pericarp1 isoform 1 [Zea mays] gi|41392134... 119 4e-25
>ref|XP_006370659.1| hypothetical protein POPTR_0001s44620g [Populus trichocarpa]
gi|550349865|gb|ERP67228.1| hypothetical protein
POPTR_0001s44620g [Populus trichocarpa]
Length = 479
Score = 127 bits (318), Expect = 2e-27
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAFH+L DP F+ ELDGIL+DYVGRE+PLYFAERLTEHYKR NGEGPHIYLKRED
Sbjct: 107 TELESAFHSLKDDPEFKKELDGILKDYVGRENPLYFAERLTEHYKRPNGEGPHIYLKRED 166
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 167 LNHTGAH 173
>ref|XP_004500046.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cicer arietinum]
Length = 412
Score = 126 bits (316), Expect = 3e-27
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE++FH+L+ D FQ ELDGILRDYVGRESPLYFAERLTEHYKR NGEGPH+YLKRED
Sbjct: 40 TELETSFHSLASDEHFQQELDGILRDYVGRESPLYFAERLTEHYKRDNGEGPHVYLKRED 99
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 100 LNHTGAH 106
>gb|ESW18398.1| hypothetical protein PHAVU_006G037600g [Phaseolus vulgaris]
Length = 473
Score = 124 bits (311), Expect = 1e-26
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFH+LS D FQ EL GIL+DYVGRESPLYFAERLTEHYKR NGEGPHIYLKRED
Sbjct: 101 TELEAAFHSLSADEQFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKRED 160
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 161 LNHTGAH 167
>gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus persica]
Length = 470
Score = 123 bits (309), Expect = 2e-26
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFHAL+ D FQ EL+GIL+DYVGRE+PLYFAERLTEHYKR NGEGPH+YLKRED
Sbjct: 98 TELEAAFHALANDEDFQKELNGILKDYVGRETPLYFAERLTEHYKRPNGEGPHVYLKRED 157
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 158 LNHTGAH 164
>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 123 bits (308), Expect = 3e-26
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AF++L+ D FQ ELDGILRDYVGRESPLYFAERLTEHY+RSNGEGPHI+LKRED
Sbjct: 100 TELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKRED 159
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 160 LNHTGAH 166
>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 123 bits (308), Expect = 3e-26
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AF++L+ D FQ ELDGILRDYVGRESPLYFAERLTEHY+RSNGEGPHI+LKRED
Sbjct: 100 TELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKRED 159
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 160 LNHTGAH 166
>ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 411
Score = 122 bits (307), Expect = 4e-26
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFH L+ D FQ EL+GILRDYVGRE+PLYFAERLTEHYKR NGEGPHIYLKRED
Sbjct: 39 TELEAAFHKLADDEDFQKELNGILRDYVGRETPLYFAERLTEHYKRPNGEGPHIYLKRED 98
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 99 LNHTGAH 105
>ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago truncatula]
gi|355489094|gb|AES70297.1| Tryptophan synthase beta
chain [Medicago truncatula]
Length = 412
Score = 122 bits (306), Expect = 5e-26
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFH+L+ D FQ EL G+L+DYVGRESPLYFAERLTEHYKR NGEGPH+YLKRED
Sbjct: 40 TELEAAFHSLASDEDFQKELAGVLKDYVGRESPLYFAERLTEHYKRGNGEGPHVYLKRED 99
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 100 LNHTGAH 106
>gb|AFK35529.1| unknown [Lotus japonicus]
Length = 417
Score = 122 bits (305), Expect = 6e-26
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFH+L+ D FQ EL GILRDYVGRESPLYFAERLTEHY+R +GEGPH+YLKRED
Sbjct: 45 TELEAAFHSLAHDEAFQKELGGILRDYVGRESPLYFAERLTEHYRRGDGEGPHVYLKRED 104
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 105 LNHTGAH 111
>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Glycine
max]
Length = 479
Score = 121 bits (304), Expect = 8e-26
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AF++LS D FQ EL GIL+DYVGRESPLYFAERLTEHYKR NGEGPHIYLKRED
Sbjct: 107 TELEAAFYSLSADEEFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKRED 166
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 167 LNHTGAH 173
>emb|CBI23954.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 121 bits (303), Expect = 1e-25
Identities = 59/67 (88%), Positives = 60/67 (89%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAF ALS D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR NGEGP IYLKRED
Sbjct: 35 TELESAFRALSGDVEFQKELDGILKDYVGRESPLYFAERLTEHYKRHNGEGPLIYLKRED 94
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 95 LNHTGAH 101
>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
vinifera]
Length = 458
Score = 121 bits (303), Expect = 1e-25
Identities = 59/67 (88%), Positives = 60/67 (89%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAF ALS D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR NGEGP IYLKRED
Sbjct: 86 TELESAFRALSGDVEFQKELDGILKDYVGRESPLYFAERLTEHYKRHNGEGPLIYLKRED 145
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 146 LNHTGAH 152
>sp|P43284.1|TRPB2_MAIZE RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
AltName: Full=Orange pericarp 2; Flags: Precursor
gi|168574|gb|AAA33491.1| tryptophan synthase
beta-subunit, partial [Zea mays]
Length = 443
Score = 120 bits (301), Expect = 2e-25
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAFHAL+ D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR++G GP IYLKRED
Sbjct: 71 TELESAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED 130
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 131 LNHTGAH 137
>gb|AFW57447.1| orange pericarp2 [Zea mays]
Length = 479
Score = 120 bits (301), Expect = 2e-25
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAFHAL+ D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR++G GP IYLKRED
Sbjct: 107 TELESAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED 166
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 167 LNHTGAH 173
>gb|EXB50262.1| Tryptophan synthase beta chain 2 [Morus notabilis]
Length = 552
Score = 120 bits (300), Expect = 2e-25
Identities = 55/67 (82%), Positives = 62/67 (92%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
+ELE+AF +L+ DP F+ ELDGIL+DYVGRESPLYFAERLTEHYKR +GEGPHIYLKRED
Sbjct: 98 SELETAFRSLAGDPDFERELDGILKDYVGRESPLYFAERLTEHYKRPDGEGPHIYLKRED 157
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 158 LNHTGAH 164
>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
synthase beta subunit [Camptotheca acuminata]
gi|2801771|gb|AAB97526.1| tryptophan synthase beta
[Camptotheca acuminata]
Length = 466
Score = 120 bits (300), Expect = 2e-25
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELESAF +LS D +FQ ELDGIL+DYVGRESPLYFAERLT HYKR NGEGP IYLKRED
Sbjct: 94 TELESAFRSLSGDQVFQKELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKRED 153
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 154 LNHTGAH 160
>ref|XP_002523007.1| tryptophan synthase beta chain, putative [Ricinus communis]
gi|223537819|gb|EEF39437.1| tryptophan synthase beta
chain, putative [Ricinus communis]
Length = 394
Score = 120 bits (300), Expect = 2e-25
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
+ELESAFH+L D FQ ELDGIL+DYVGRE+PLYFAERLTEHY R NGEGPHIYLKRED
Sbjct: 103 SELESAFHSLKDDLDFQKELDGILKDYVGRETPLYFAERLTEHYGRPNGEGPHIYLKRED 162
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 163 LNHTGAH 169
>ref|XP_004972911.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Setaria italica]
Length = 474
Score = 119 bits (298), Expect = 4e-25
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFHAL+ D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR++G GP IYLKRED
Sbjct: 102 TELENAFHALATDEEFQKELDGILKDYVGRESPLYFAERLTEHYKRTDGTGPLIYLKRED 161
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 162 LNHTGAH 168
>ref|XP_002443820.1| hypothetical protein SORBIDRAFT_07g002770 [Sorghum bicolor]
gi|18481702|gb|AAL73524.1|AF466200_3 tryptophan synthase
beta-subunit [Sorghum bicolor]
gi|241940170|gb|EES13315.1| hypothetical protein
SORBIDRAFT_07g002770 [Sorghum bicolor]
Length = 476
Score = 119 bits (298), Expect = 4e-25
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFHAL+ D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR++G GP IYLKRED
Sbjct: 104 TELENAFHALATDEEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED 163
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 164 LNHTGAH 170
>gb|AFW61277.1| orange pericarp1 isoform 1 [Zea mays] gi|413921346|gb|AFW61278.1|
orange pericarp1 isoform 2 [Zea mays]
Length = 474
Score = 119 bits (298), Expect = 4e-25
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 1 TELESAFHALSKDPLFQSELDGILRDYVGRESPLYFAERLTEHYKRSNGEGPHIYLKRED 180
TELE+AFHAL+ D FQ ELDGIL+DYVGRESPLYFAERLTEHYKR++G GP IYLKRED
Sbjct: 102 TELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKRED 161
Query: 181 LNHTGAH 201
LNHTGAH
Sbjct: 162 LNHTGAH 168