BLASTX nr result

ID: Rheum21_contig00032926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032926
         (660 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY22407.1| Uncharacterized protein isoform 2 [Theobroma cacao]     62   2e-07
gb|EOY22406.1| Uncharacterized protein isoform 1 [Theobroma cacao]     62   2e-07
ref|XP_006578694.1| PREDICTED: micronuclear linker histone polyp...    57   6e-06
ref|XP_006578693.1| PREDICTED: micronuclear linker histone polyp...    57   6e-06
ref|XP_004236351.1| PREDICTED: uncharacterized protein LOC101243...    57   6e-06
ref|XP_006351493.1| PREDICTED: cactin-like [Solanum tuberosum]         56   8e-06

>gb|EOY22407.1| Uncharacterized protein isoform 2 [Theobroma cacao]
          Length = 438

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
 Frame = +3

Query: 150 DQTTTTPAVETRGKFVNKARGTAFPEISLDDLAIELFXXXXXXXXXXVSTGTAP------ 311
           D    TPA  +RG+FVN  RG+ FPEISLDDLAIELF           +   +P      
Sbjct: 49  DDEEPTPAPRSRGRFVNTVRGSGFPEISLDDLAIELFDSSPRGRSASRNADVSPRNGEGG 108

Query: 312 -------SQRRGRSVSKQAS 350
                  +QRRGRSVS+Q S
Sbjct: 109 KGGGESATQRRGRSVSRQGS 128


>gb|EOY22406.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 567

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
 Frame = +3

Query: 150 DQTTTTPAVETRGKFVNKARGTAFPEISLDDLAIELFXXXXXXXXXXVSTGTAP------ 311
           D    TPA  +RG+FVN  RG+ FPEISLDDLAIELF           +   +P      
Sbjct: 49  DDEEPTPAPRSRGRFVNTVRGSGFPEISLDDLAIELFDSSPRGRSASRNADVSPRNGEGG 108

Query: 312 -------SQRRGRSVSKQAS 350
                  +QRRGRSVS+Q S
Sbjct: 109 KGGGESATQRRGRSVSRQGS 128


>ref|XP_006578694.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X2
           [Glycine max]
          Length = 513

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
 Frame = +3

Query: 183 RGKFVNKARGTAFPEISLDDLAIELF---------XXXXXXXXXXVSTGTAPSQRRGRSV 335
           RG+FVN  RG+ FPEISLDDLAIE F                      G+A SQRRGRSV
Sbjct: 60  RGRFVNTVRGSGFPEISLDDLAIEFFESAKRDRFSSRTSKSEASPAGAGSAASQRRGRSV 119

Query: 336 SKQAS 350
           S+++S
Sbjct: 120 SRKSS 124


>ref|XP_006578693.1| PREDICTED: micronuclear linker histone polyprotein-like isoform X1
           [Glycine max]
          Length = 553

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
 Frame = +3

Query: 183 RGKFVNKARGTAFPEISLDDLAIELF---------XXXXXXXXXXVSTGTAPSQRRGRSV 335
           RG+FVN  RG+ FPEISLDDLAIE F                      G+A SQRRGRSV
Sbjct: 60  RGRFVNTVRGSGFPEISLDDLAIEFFESAKRDRFSSRTSKSEASPAGAGSAASQRRGRSV 119

Query: 336 SKQAS 350
           S+++S
Sbjct: 120 SRKSS 124


>ref|XP_004236351.1| PREDICTED: uncharacterized protein LOC101243879 [Solanum
           lycopersicum]
          Length = 560

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
 Frame = +3

Query: 183 RGKFVNKARGTAFPEISLDDLAIELF-------------XXXXXXXXXXVSTGTAPSQRR 323
           RGKFVN +RG+  PEISLDDLAIE F                        ++ TA S+RR
Sbjct: 65  RGKFVNTSRGSGVPEISLDDLAIEFFSQEEEKENSDRGRSERRASGIGHWASETASSRRR 124

Query: 324 GRSVSKQASSRLAGERK 374
           GRSVS+Q S   A +RK
Sbjct: 125 GRSVSRQGSKTSAADRK 141


>ref|XP_006351493.1| PREDICTED: cactin-like [Solanum tuberosum]
          Length = 560

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/77 (45%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
 Frame = +3

Query: 183 RGKFVNKARGTAFPEISLDDLAIELF-------------XXXXXXXXXXVSTGTAPSQRR 323
           RGKFVN  RG+  PEISLDDLAIE F                        ++ TA S+RR
Sbjct: 65  RGKFVNTTRGSGVPEISLDDLAIEFFSQEEDRENSDRGRSERRASGIGHWASETASSRRR 124

Query: 324 GRSVSKQASSRLAGERK 374
           GRSVS+Q S   A +RK
Sbjct: 125 GRSVSRQGSKTSAADRK 141


Top