BLASTX nr result

ID: Rheum21_contig00032691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032691
         (456 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197870.1| uncharacterized protein [Arabidopsis thaliana] ...    59   9e-07
gb|ABK28277.1| unknown [Arabidopsis thaliana]                          59   9e-07
gb|ESW33308.1| hypothetical protein PHAVU_001G059400g [Phaseolus...    57   2e-06
gb|EXC32723.1| hypothetical protein L484_019836 [Morus notabilis]      57   3e-06
ref|XP_006289462.1| hypothetical protein CARUB_v10002989mg [Caps...    56   4e-06
gb|EOY29219.1| Uncharacterized protein TCM_036820 [Theobroma cacao]    56   6e-06
ref|XP_002872132.1| hypothetical protein ARALYDRAFT_489351 [Arab...    55   1e-05

>ref|NP_197870.1| uncharacterized protein [Arabidopsis thaliana]
           gi|91805659|gb|ABE65558.1| unknown [Arabidopsis
           thaliana] gi|332005991|gb|AED93374.1| uncharacterized
           protein AT5G24880 [Arabidopsis thaliana]
          Length = 443

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/125 (32%), Positives = 62/125 (49%)
 Frame = -3

Query: 379 TMATTIKEKGSASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKPDKPLPNYLKPTISSS 200
           T ++T K K    + S T  + +    P   A  ++   SSDQKP+KPLPNYLKPTISS 
Sbjct: 3   TTSSTTKAKPDNQNLSRTKSLGRKPKQPLSTA--SSEDGSSDQKPEKPLPNYLKPTISSR 60

Query: 199 LDFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQTHKAQPAKHAPQRSVSSLSS 20
            D  A + L+++   +          +RR   ++PP    +    P+  A  R   SL+ 
Sbjct: 61  PD--AGKLLKKNNNSLDDN----QKLLRRRSFDRPP----SSLTSPSTSASPRIQKSLNV 110

Query: 19  KPTKT 5
            P+++
Sbjct: 111 SPSRS 115


>gb|ABK28277.1| unknown [Arabidopsis thaliana]
          Length = 444

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/125 (32%), Positives = 62/125 (49%)
 Frame = -3

Query: 379 TMATTIKEKGSASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKPDKPLPNYLKPTISSS 200
           T ++T K K    + S T  + +    P   A  ++   SSDQKP+KPLPNYLKPTISS 
Sbjct: 3   TTSSTTKAKPDNQNLSRTKSLGRKPKQPLSTA--SSEDGSSDQKPEKPLPNYLKPTISSR 60

Query: 199 LDFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQTHKAQPAKHAPQRSVSSLSS 20
            D  A + L+++   +          +RR   ++PP    +    P+  A  R   SL+ 
Sbjct: 61  PD--AGKLLKKNNNSLDDN----QKLLRRRSFDRPP----SSLTSPSTSASPRIQKSLNV 110

Query: 19  KPTKT 5
            P+++
Sbjct: 111 SPSRS 115


>gb|ESW33308.1| hypothetical protein PHAVU_001G059400g [Phaseolus vulgaris]
          Length = 395

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
 Frame = -3

Query: 376 MATTIKEKG------SASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKP-----DKPLP 230
           MAT  KE         A+SS+      K T+ PS  +  + T +SS +KP     DK +P
Sbjct: 1   MATKAKESSVVGREKKATSSNPHITTTKRTTKPSTTSSSSTTTTSSIKKPNTTTSDKNIP 60

Query: 229 NYLKPTISSSLDFSASRTLRRSTTDISTKATKPAATIRRHPLEKP--------PLPAQTH 74
           NYLKPT++S  +  +S+  + ++ + +T      + IRR  LEKP        P+P +T 
Sbjct: 61  NYLKPTLTSIHESPSSKHPKTNSPNNNT------SDIRRRSLEKPLSPSNIRRPVPRRTS 114

Query: 73  KAQPAKHA-PQRSVSSLSSKP 14
            A  AK   P + +S  +SKP
Sbjct: 115 IAPLAKTTIPSKPISDKTSKP 135


>gb|EXC32723.1| hypothetical protein L484_019836 [Morus notabilis]
          Length = 437

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 53/139 (38%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
 Frame = -3

Query: 376 MATTIKEKGSASSSS--VTGKMRKNTSSPS-PQAKKTATKSSSDQ------KP-----DK 239
           MAT  K+  ++S+S+  +  K R  T+ PS  QAK T+TKSS+ Q      KP     +K
Sbjct: 1   MATKAKDHSNSSTSTTALAKKERVATTIPSNSQAKTTSTKSSTTQGSSSTHKPSSSSTEK 60

Query: 238 PLPNYLKPTISSSLDFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQTHKAQPA 59
            +PNYLKPTISS  D               +   KP+   RR    KPP PA    ++P 
Sbjct: 61  QVPNYLKPTISSRQD---------------SATPKPSLNRRRSFDNKPPSPA----SRPQ 101

Query: 58  KHAPQRSV-----SSLSSK 17
           K  P+RS      SS SSK
Sbjct: 102 KVVPERSTVPVRSSSFSSK 120


>ref|XP_006289462.1| hypothetical protein CARUB_v10002989mg [Capsella rubella]
           gi|482558168|gb|EOA22360.1| hypothetical protein
           CARUB_v10002989mg [Capsella rubella]
          Length = 421

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = -3

Query: 379 TMATTIKEKGSASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKPDKPLPNYLKPTISSS 200
           T ++T K K   ++ + T  + +    P+P +  ++   SSDQKP+KP+PNYLKPTISS 
Sbjct: 3   TTSSTTKAKADNANLTRTRSLGRKPK-PAPSSTVSSEDGSSDQKPEKPVPNYLKPTISSR 61

Query: 199 LDFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQT-HKAQPAKHAPQRSVSSLS 23
            D         ++ D + K       +RR   ++PP    T H +  A    Q+S++   
Sbjct: 62  PDPVKFLKKNNNSLDDNQK------LLRRRSFDRPPSSLTTSHSSTSASPRIQKSLNVSP 115

Query: 22  SK 17
           S+
Sbjct: 116 SR 117


>gb|EOY29219.1| Uncharacterized protein TCM_036820 [Theobroma cacao]
          Length = 457

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 376 MATTIKEKGSASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKPDKPLPNYLKPTISSSL 197
           MATT +E       S  GK ++ TS  +P       + S+    DK +PNYLKPTISS  
Sbjct: 1   MATTKRE-------SSLGKEKRGTSPSNPSVAH-GQRRSTPGSTDKQVPNYLKPTISSRN 52

Query: 196 DFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQTHKA--QPAKHAPQRSVS-SL 26
           D    +T++++  + +++       +RR   ++PP  A+  KA   PA+  P  S S S 
Sbjct: 53  D--GVKTVKKTGPEDTSQRPN---LLRRRSFDRPPSAARVQKALISPAREKPTTSRSASF 107

Query: 25  SSKPT 11
           SSKPT
Sbjct: 108 SSKPT 112


>ref|XP_002872132.1| hypothetical protein ARALYDRAFT_489351 [Arabidopsis lyrata subsp.
           lyrata] gi|297317969|gb|EFH48391.1| hypothetical protein
           ARALYDRAFT_489351 [Arabidopsis lyrata subsp. lyrata]
          Length = 437

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/125 (31%), Positives = 60/125 (48%)
 Frame = -3

Query: 379 TMATTIKEKGSASSSSVTGKMRKNTSSPSPQAKKTATKSSSDQKPDKPLPNYLKPTISSS 200
           T ++T K K    + + T  + +    PS      +++  SDQKP+KPLPNYLKPTISS 
Sbjct: 3   TTSSTTKAKTDNQNLTRTKSLGRKPKLPSSTG---SSEDGSDQKPEKPLPNYLKPTISSR 59

Query: 199 LDFSASRTLRRSTTDISTKATKPAATIRRHPLEKPPLPAQTHKAQPAKHAPQRSVSSLSS 20
            D         S+ D + K       +RR   ++PP    +    P+  A  R   SL+ 
Sbjct: 60  PDPVKLLKKNNSSLDDNQK------LLRRRSFDRPP----SSLTSPSTSASPRIQKSLNV 109

Query: 19  KPTKT 5
            P+++
Sbjct: 110 SPSRS 114


Top