BLASTX nr result

ID: Rheum21_contig00032521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032521
         (363 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ...   115   8e-24
ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synth...   109   4e-22
gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus pe...   109   4e-22
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   108   1e-21
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth...   108   1e-21
ref|XP_006431978.1| hypothetical protein CICLE_v100038302mg, par...   108   1e-21
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth...   107   2e-21
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   107   2e-21
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth...   106   3e-21
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   106   3e-21
gb|EXC28455.1| hypothetical protein L484_001536 [Morus notabilis]     105   8e-21
ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synth...   105   8e-21
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth...   105   8e-21
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   102   5e-20
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              102   7e-20
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   102   7e-20
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   102   7e-20
ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatul...   100   2e-19
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus...    99   4e-19
ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synth...    99   4e-19

>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 507

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/74 (70%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM T+VESEEI K V++FY ++LLPQVS+FLD SK+PWK+WVE LDANTS+PD  LD+
Sbjct: 424 RPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDANTSVPDAELDE 483

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WKEK  N
Sbjct: 484 VRTAWKLWKEKLLN 497


>ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial
           [Cicer arietinum]
          Length = 474

 Score =  109 bits (272), Expect = 4e-22
 Identities = 47/74 (63%), Positives = 65/74 (87%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+VESEEI+KVV++FYT+++LPQVS+FLD+SK PW++W+E LDA+TSIP+  LD+
Sbjct: 395 RPEMQTIVESEEINKVVDDFYTSVMLPQVSKFLDSSKVPWEEWIEKLDAHTSIPNDQLDE 454

Query: 183 VRNAWKVWKEKYQN 224
           VR A  +WKE + +
Sbjct: 455 VRKARNLWKENFDS 468


>gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
          Length = 515

 Score =  109 bits (272), Expect = 4e-22
 Identities = 48/74 (64%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM  +VES EI K V+EFYT+++LP+VS+FL+ S  PWK+WVE LD NT IPD  LD+
Sbjct: 435 RPEMMAMVESGEIIKAVDEFYTSVMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDE 494

Query: 183 VRNAWKVWKEKYQN 224
           VRNAWKVWKEK+ +
Sbjct: 495 VRNAWKVWKEKFDS 508


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
           [Citrus sinensis]
          Length = 539

 Score =  108 bits (269), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+VESEEI K+V+EFYT+++LP+VS+FLD +K+PW +W+E L+  TSIP+  LD+
Sbjct: 455 RPEMQTMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDE 514

Query: 183 VRNAWKVWKEK 215
           VRNAW++WKEK
Sbjct: 515 VRNAWQLWKEK 525


>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Citrus sinensis] gi|568827612|ref|XP_006468145.1|
           PREDICTED: putative tRNA pseudouridine synthase-like
           isoform X2 [Citrus sinensis]
           gi|568827614|ref|XP_006468146.1| PREDICTED: putative
           tRNA pseudouridine synthase-like isoform X3 [Citrus
           sinensis]
          Length = 605

 Score =  108 bits (269), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+VESEEI K+V+EFYT+++LP+VS+FLD +K+PW +W+E L+  TSIP+  LD+
Sbjct: 521 RPEMQTMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDE 580

Query: 183 VRNAWKVWKEK 215
           VRNAW++WKEK
Sbjct: 581 VRNAWQLWKEK 591


>ref|XP_006431978.1| hypothetical protein CICLE_v100038302mg, partial [Citrus
           clementina] gi|557534100|gb|ESR45218.1| hypothetical
           protein CICLE_v100038302mg, partial [Citrus clementina]
          Length = 380

 Score =  108 bits (269), Expect = 1e-21
 Identities = 46/71 (64%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+VESEEI K+V+EFYT+++LP+VS+FLD +K+PW +W+E L+  TSIP+  LD+
Sbjct: 280 RPEMQTMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDE 339

Query: 183 VRNAWKVWKEK 215
           VRNAW++WKEK
Sbjct: 340 VRNAWQLWKEK 350


>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
           [Solanum tuberosum]
          Length = 423

 Score =  107 bits (266), Expect = 2e-21
 Identities = 45/74 (60%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ES++I K V++FY + +LPQ+S+FLD SK+PW +WVE+LDANTSIPD+ L++
Sbjct: 348 RPEMLTLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEE 407

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WK +Y +
Sbjct: 408 VRVAWKLWKAQYDS 421


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Solanum tuberosum]
          Length = 487

 Score =  107 bits (266), Expect = 2e-21
 Identities = 45/74 (60%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ES++I K V++FY + +LPQ+S+FLD SK+PW +WVE+LDANTSIPD+ L++
Sbjct: 412 RPEMLTLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEE 471

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WK +Y +
Sbjct: 472 VRVAWKLWKAQYDS 485


>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria
           vesca subsp. vesca]
          Length = 509

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/74 (60%), Positives = 62/74 (83%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM  +VESEE+ K V+EF+T+++LPQV++FL+ S  PW++W+E LD NT IPD  LD+
Sbjct: 431 RPEMIAMVESEEVIKQVDEFFTSVMLPQVAKFLEPSGYPWQEWIENLDRNTGIPDRELDE 490

Query: 183 VRNAWKVWKEKYQN 224
           VRNAWKVWKEK+++
Sbjct: 491 VRNAWKVWKEKFES 504


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
           lycopersicum]
          Length = 496

 Score =  106 bits (265), Expect = 3e-21
 Identities = 46/74 (62%), Positives = 62/74 (83%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ES++I K V++FY + LLPQ+S+FLD SK+PW +WVE+LDANTSIPD  L++
Sbjct: 408 RPEMLTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEE 467

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WK +Y +
Sbjct: 468 VRVAWKLWKAQYDS 481


>gb|EXC28455.1| hypothetical protein L484_001536 [Morus notabilis]
          Length = 153

 Score =  105 bits (261), Expect = 8e-21
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM T+VESEEI + V+EFYT++++PQV++FLD S +PW++WVE LD NT IPD  LD+
Sbjct: 63  RPEMLTMVESEEILEAVDEFYTSIVIPQVTKFLDPSASPWREWVENLDHNTRIPDAQLDE 122

Query: 183 VRNAWKVWKEKYQN 224
           VR AW  WKE Y++
Sbjct: 123 VRIAWNTWKENYES 136


>ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X5
           [Glycine max]
          Length = 403

 Score =  105 bits (261), Expect = 8e-21
 Identities = 44/73 (60%), Positives = 63/73 (86%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+V+SEEI K V++FYT+++LPQVS+ LD S++PW +W+E LDA+TSIP+  LD+
Sbjct: 324 RPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDE 383

Query: 183 VRNAWKVWKEKYQ 221
           VR AW ++KEK++
Sbjct: 384 VRKAWNLFKEKFE 396


>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
           [Glycine max] gi|571441413|ref|XP_006575436.1|
           PREDICTED: putative tRNA pseudouridine synthase-like
           isoform X2 [Glycine max]
           gi|571441415|ref|XP_006575437.1| PREDICTED: putative
           tRNA pseudouridine synthase-like isoform X3 [Glycine
           max] gi|571441417|ref|XP_006575438.1| PREDICTED:
           putative tRNA pseudouridine synthase-like isoform X4
           [Glycine max]
          Length = 493

 Score =  105 bits (261), Expect = 8e-21
 Identities = 44/73 (60%), Positives = 63/73 (86%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+V+SEEI K V++FYT+++LPQVS+ LD S++PW +W+E LDA+TSIP+  LD+
Sbjct: 414 RPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDE 473

Query: 183 VRNAWKVWKEKYQ 221
           VR AW ++KEK++
Sbjct: 474 VRKAWNLFKEKFE 486


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517306|gb|AES98929.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 501

 Score =  102 bits (254), Expect = 5e-20
 Identities = 44/74 (59%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQT+VESEEI+KVV++FY +++LPQVS+FLD S+ PW +W+E  DA+TSIP+  LD+
Sbjct: 422 RPEMQTIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDE 481

Query: 183 VRNAWKVWKEKYQN 224
           VR A  +WKE + +
Sbjct: 482 VRKARNLWKENFDS 495


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ESEEI K V+EFYT+++LPQVS+FLD SK+PW DW+E L   +SIP+  LDD
Sbjct: 416 RPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 474

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WKE +++
Sbjct: 475 VRTAWKLWKENFRS 488


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ESEEI K V+EFYT+++LPQVS+FLD SK+PW DW+E L   +SIP+  LDD
Sbjct: 437 RPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 495

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WKE +++
Sbjct: 496 VRTAWKLWKENFRS 509


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM TL+ESEEI K V+EFYT+++LPQVS+FLD SK+PW DW+E L   +SIP+  LDD
Sbjct: 437 RPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 495

Query: 183 VRNAWKVWKEKYQN 224
           VR AWK+WKE +++
Sbjct: 496 VRTAWKLWKENFRS 509


>ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517304|gb|AES98927.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 483

 Score =  100 bits (249), Expect = 2e-19
 Identities = 42/73 (57%), Positives = 61/73 (83%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM ++VESE+I K V+EFYT+++LP++S+FLD+SK+PW DWVE LD  +SIP+  L++
Sbjct: 404 RPEMVSMVESEQILKSVDEFYTSVMLPELSKFLDSSKSPWADWVEKLDKYSSIPNDQLEE 463

Query: 183 VRNAWKVWKEKYQ 221
           VR AW+ WKE ++
Sbjct: 464 VREAWRTWKENFR 476


>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 45/81 (55%), Positives = 64/81 (79%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEMQ +VESEEI+K V+ FYT+++LPQVS+FLD S +PW++W+E LDA TSIP+  LD+
Sbjct: 427 RPEMQAMVESEEINKAVDGFYTSVMLPQVSKFLDPSGSPWEEWIEKLDAYTSIPNDQLDE 486

Query: 183 VRNAWKVWKEKYQN*S*IEAR 245
           VR AW + +E  ++ + I+ R
Sbjct: 487 VRKAWNLLQENLESRTSIQRR 507


>ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cicer
           arietinum]
          Length = 483

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 41/73 (56%), Positives = 61/73 (83%)
 Frame = +3

Query: 3   RPEMQTLVESEEISKVVNEFYTAMLLPQVSQFLDTSKAPWKDWVEVLDANTSIPDTHLDD 182
           RPEM ++VESE+I K V+EFY++++LP++S+FLD+SK+PW +WVE LD  +SIPD  L++
Sbjct: 404 RPEMVSMVESEQILKSVDEFYSSVMLPELSKFLDSSKSPWANWVEKLDKYSSIPDAQLEE 463

Query: 183 VRNAWKVWKEKYQ 221
           VR AW+ WKE ++
Sbjct: 464 VREAWRTWKENFR 476


Top