BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032393
         (259 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW22781.1| RNA polymerase beta [Phaseolus vulgaris]               108   6e-22
ref|YP_001122807.1| RNA polymerase beta subunit [Phaseolus vulga...   108   6e-22
gb|AHJ61377.1| RNA polymerase beta [Cucumis hystrix]                  108   1e-21
emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]     108   1e-21
prf||1211235Q rpoC-like ORF 548                                       108   1e-21
sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymeras...   108   1e-21
gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequ...   108   1e-21
ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [...   108   1e-21
emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salv...   108   1e-21
ref|YP_009000006.1| RNA polymerase beta (chloroplast) [Silene co...   108   1e-21
ref|YP_008999926.1| RNA polymerase beta (chloroplast) [Agrostemm...   108   1e-21
gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41645.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41643.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41640.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21
gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (ch...   108   1e-21

>gb|ABW22781.1| RNA polymerase beta [Phaseolus vulgaris]
          Length = 684

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQ+DGGKLMSSDINELYRRVIY               PGEL
Sbjct: 263 PEWMVLCLLPVLPPELRPIIQVDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL 322

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           VICQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 323 VICQEKLVQEAVDTLLDNGIRGQPMR 348


>ref|YP_001122807.1| RNA polymerase beta subunit [Phaseolus vulgaris]
           gi|212288307|sp|A4GGA6.1|RPOC1_PHAVU RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|112030975|gb|ABH88087.1| RNA polymerase beta subunit
           [Phaseolus vulgaris]
          Length = 684

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQ+DGGKLMSSDINELYRRVIY               PGEL
Sbjct: 263 PEWMVLCLLPVLPPELRPIIQVDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL 322

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           VICQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 323 VICQEKLVQEAVDTLLDNGIRGQPMR 348


>gb|AHJ61377.1| RNA polymerase beta [Cucumis hystrix]
          Length = 681

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 262 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL 321

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 322 VMCQEKLVQEAVDTLLDNGIRGQPMR 347


>emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]
          Length = 688

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 268 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 327

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMR 353


>prf||1211235Q rpoC-like ORF 548
          Length = 548

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 128 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 187

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 188 VMCQEKLVQEAVDTLLDNGIRGQPMR 213


>sp|P12116.1|RPOC1_TOBAC RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
          Length = 680

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 260 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 319

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 320 VMCQEKLVQEAVDTLLDNGIRGQPMR 345


>gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequalis]
          Length = 679

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 265 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL 324

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 325 VMCQEKLVQEAVDTLLDNGIRGQPMR 350


>ref|YP_009002249.1| RNA polymerase beta' subunit (chloroplast) [Pinguicula ehlersiae]
           gi|575882131|emb|CDL78805.1| RNA polymerase beta'
           subunit (chloroplast) [Pinguicula ehlersiae]
          Length = 687

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 268 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 327

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 328 VMCQEKLVQEAVDTLLDNGIRGQPMR 353


>emb|CCQ71611.1| RNA polymerase beta' subunit (chloroplast) [Salvia miltiorrhiza]
          Length = 682

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 263 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 322

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 323 VMCQEKLVQEAVDTLLDNGIRGQPMR 348


>ref|YP_009000006.1| RNA polymerase beta (chloroplast) [Silene conoidea]
           gi|555944093|gb|AGZ17996.1| RNA polymerase beta
           (chloroplast) [Silene conoidea]
          Length = 679

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 261 PEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 320

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMR 346


>ref|YP_008999926.1| RNA polymerase beta (chloroplast) [Agrostemma githago]
           gi|555944012|gb|AGZ17916.1| RNA polymerase beta
           (chloroplast) [Agrostemma githago]
          Length = 677

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 261 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLNDLLTTSRSTPGEL 320

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 321 VMCQEKLVQEAVDTLLDNGIRGQPMR 346


>gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Paeonia obovata]
          Length = 639

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 243 PEWMVLGLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 302

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 303 VMCQEKLVQEAVDTLLDNGIRGQPMR 328


>gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Rhodoleia championii]
          Length = 639

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 243 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 302

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 303 VMCQEKLVQEAVDTLLDNGIRGQPMR 328


>gb|AHE41648.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Philadelphus coronarius]
          Length = 639

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 243 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 302

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 303 VMCQEKLVQEAVDTLLDNGIRGQPMR 328


>gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Mytilaria laosensis]
          Length = 487

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 91  PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 150

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 151 VMCQEKLVQEAVDTLLDNGIRGQPMR 176


>gb|AHE41645.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Kalanchoe laciniata]
          Length = 639

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 243 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSVSTPGEL 302

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 303 VMCQEKLVQEAVDTLLDNGIRGQPMR 328


>gb|AHE41643.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Exbucklandia populnea]
          Length = 470

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 74  PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 133

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 134 VMCQEKLVQEAVDTLLDNGIRGQPMR 159


>gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Disanthus cercidifolius subsp. longipes]
          Length = 621

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 227 PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 286

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 287 VMCQEKLVQEAVDTLLDNGIRGQPMR 312


>gb|AHE41640.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Cercidiphyllum japonicum]
          Length = 486

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 91  PEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 150

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 151 VMCQEKLVQEAVDTLLDNGIRGQPMR 176


>gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (chloroplast)
           [Daphniphyllum oldhamii]
          Length = 639

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   PEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXXPGEL 180
           PEWMV             IIQIDGGKLMSSDINELYRRVIY               PGEL
Sbjct: 243 PEWMVLGLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGEL 302

Query: 181 VICQEKLVQEAVDTLLDNGIRGQPMR 258
           V+CQEKLVQEAVDTLLDNGIRGQPMR
Sbjct: 303 VMCQEKLVQEAVDTLLDNGIRGQPMR 328