BLASTX nr result
ID: Rheum21_contig00032314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032314
(335 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 67 2e-09
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali... 67 3e-09
gb|ABK28199.1| unknown [Arabidopsis thaliana] 66 4e-09
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali... 66 4e-09
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 66 5e-09
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 66 5e-09
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta... 65 7e-09
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana] 64 2e-08
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali... 64 2e-08
gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata] 64 2e-08
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ... 63 5e-08
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] 63 5e-08
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 63 5e-08
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 6e-08
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 62 6e-08
ref|XP_006851004.1| hypothetical protein AMTR_s00025p00218070 [A... 62 8e-08
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana] 62 8e-08
dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like ... 62 1e-07
gb|EMJ13927.1| hypothetical protein PRUPE_ppa019009mg, partial [... 60 3e-07
gb|EMJ12120.1| hypothetical protein PRUPE_ppb019242mg, partial [... 60 4e-07
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/109 (31%), Positives = 63/109 (57%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
SD A K + L+ GG++RN+NG + + Y+ + G N+ AE+ G+ GL LA++ G+ +
Sbjct: 1212 SDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTK 1271
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
++ ETDS ++LR T +++ C +++ DH +++ H R
Sbjct: 1272 LIAETDSEAVVQVLRKDGPVTPDASILVKDC-KLLLDHFQEIKVTHILR 1319
>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/109 (30%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R++ G + + + G +A AE+ G+++GL +A +
Sbjct: 158 TDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTR 217
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ IE DS L++ + H F+++ C I W VRI H +R
Sbjct: 218 LEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFI-SRDWRVRISHVYR 265
>gb|ABK28199.1| unknown [Arabidopsis thaliana]
Length = 315
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/109 (30%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R++ G + + + G +A AE+ G+++GL +A +
Sbjct: 158 TDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTR 217
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ IE DS L++ + H F+++ C I W VRI H +R
Sbjct: 218 LEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFI-SRDWRVRISHVYR 265
>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 314
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/109 (30%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R++ G + + + G +A AE+ G+++GL +A +
Sbjct: 158 TDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTR 217
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ IE DS L++ + H F+++ C I W VRI H +R
Sbjct: 218 LEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFI-SRDWRVRISHVYR 265
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/109 (31%), Positives = 62/109 (56%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
SD A K + L+ GG++RN+NG + + Y + G N+ AE+ G+ GL LA++ G+ +
Sbjct: 1744 SDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTK 1803
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
++ ETDS ++LR T +++ C +++ DH +++ H R
Sbjct: 1804 LIAETDSEAVVQVLRKDGPVTPDASILVKDC-KLLLDHFQEIKVTHILR 1851
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/109 (31%), Positives = 62/109 (56%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
SD A K + L+ GG++RN+NG + + Y + G N+ AE+ G+ GL LA++ G+ +
Sbjct: 1212 SDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTK 1271
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
++ ETDS ++LR T +++ C +++ DH +++ H R
Sbjct: 1272 LIAETDSEAVVQVLRKDGPVTPDASILVKDC-KLLLDHFQEIKVTHILR 1319
>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/109 (29%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP + GG++R+ NG + + + G +A AE+ G+++GL +A G +
Sbjct: 165 TDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARR 224
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L +H F+++ C+ + W+VRI H +R
Sbjct: 225 VELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFL-SKGWIVRISHVYR 272
>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
Length = 253
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/109 (31%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R+ +G + + + G +A AE+ G ++GL +A G Q
Sbjct: 97 TDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQ 156
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS LR +H F+++ C ++ W VRI H +R
Sbjct: 157 LEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLL-SKDWSVRISHVYR 204
>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
gi|55978717|gb|AAV68820.1| hypothetical protein
AT1G17390 [Arabidopsis thaliana]
Length = 272
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/109 (31%), Positives = 59/109 (54%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R+ +G + + + G +A AE+ G ++GL +A G Q
Sbjct: 116 TDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQ 175
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS LR +H F+++ C ++ W VRI H +R
Sbjct: 176 LEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCHGLL-SKDWSVRISHVYR 223
>gb|ABW81036.1| unknown [Arabidopsis lyrata subsp. lyrata]
Length = 172
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/109 (29%), Positives = 60/109 (55%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ G++RN +G++ + + G +A AE+ G+++GL A H +
Sbjct: 16 TDGASQGNPGLATASGVLRNSDGKWCGGFALNIGRCSAPLAELWGVYYGLYTAWEHRVTR 75
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+V+E DS+ L +H +++ C+ I W+VR+ H +R
Sbjct: 76 LVLEVDSSLVVGFLTTGIGDSHPLSILVRLCYGFI-ARDWIVRVTHVYR 123
>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/109 (30%), Positives = 60/109 (55%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A+ GNP + GG+IR+++G + + + G +A AE+ G+++GL +A G+ +
Sbjct: 520 TDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRR 579
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L+ +H F+++ C I W+VRI H +R
Sbjct: 580 VRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFI-SKDWIVRITHVYR 627
>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/109 (30%), Positives = 58/109 (53%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R+ G + + + G +A AE+ G+++GL A P+
Sbjct: 573 TDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPR 632
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L+ +H F+++ C + WLVRI H +R
Sbjct: 633 VELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFL-QKDWLVRIVHVYR 680
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/109 (30%), Positives = 58/109 (53%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R+ G + + + G +A AE+ G+++GL A P+
Sbjct: 464 TDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPR 523
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L+ +H F+++ C + WLVRI H +R
Sbjct: 524 VELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFL-QKDWLVRIVHVYR 571
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A+KGNP + GGG+IR G + + G AE+ + GL +A + Q
Sbjct: 1221 TDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLAVLRGLMIAWEGNHKQ 1280
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+++ DS +LL + +I RC +I W + I+H +R
Sbjct: 1281 VIVSVDSELVAKLLISNAPPSSPYIHIINRCLSLIARKEWKIVIEHCYR 1329
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A+KGNP L+ GGI+R +G + + + G +A AE+ +++GL +A +
Sbjct: 638 TDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLAELWRVYYGLYIAWERKITR 697
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L +H F+++ C+ I W+VRI H +R
Sbjct: 698 LEVEVDSELVVGFLTTWISDSHPLSFLVRLCYGFI-SRDWIVRISHVYR 745
>ref|XP_006851004.1| hypothetical protein AMTR_s00025p00218070 [Amborella trichopoda]
gi|548854675|gb|ERN12585.1| hypothetical protein
AMTR_s00025p00218070 [Amborella trichopoda]
Length = 313
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/108 (28%), Positives = 58/108 (53%)
Frame = -3
Query: 330 DSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQI 151
D A+ GNP + GGGI+RN G++ A+ G ++AE ++ G+KL + GY +I
Sbjct: 150 DGASSGNPGRAGGGGILRNHQGKWLIAFASHYGTTTNVAAEFRALYEGVKLCKEEGYKKI 209
Query: 150 VIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
++E+DS ++ + + + + W +++++ W I HT R
Sbjct: 210 ILESDSMMLVDVITHKMVVPWQVWTWWESFWMLVENYEW--SITHTLR 255
>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
Length = 233
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/109 (31%), Positives = 57/109 (52%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A+ GNP L+ GG +RN+ G + + + G A AE+ G+++GL +A G +
Sbjct: 77 TDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLAELWGVYYGLFMAWDRGITR 136
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS LR +H F+++ C + W+VRI H +R
Sbjct: 137 LELEVDSEMVVGFLRTGIGSSHPLSFLVRMCHGFL-SRDWIVRIGHVYR 184
>dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 308
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/109 (29%), Positives = 58/109 (53%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D A++GNP L+ GG++R+ G + + + G +A AE+ G+++GL A P+
Sbjct: 152 TDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVPR 211
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+ +E DS L+ +H F+++ C + WLVRI + +R
Sbjct: 212 VELEVDSEAIVGFLKTGISDSHPLSFLVRLCHNFL-QKDWLVRIVYVYR 259
>gb|EMJ13927.1| hypothetical protein PRUPE_ppa019009mg, partial [Prunus persica]
Length = 259
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/109 (30%), Positives = 55/109 (50%)
Frame = -3
Query: 333 SDSAAKGNPDLSEGGGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQ 154
+D KG + G ++R+ +G++ + + G G L AE+ GI+ GLK+A G
Sbjct: 45 TDGCRKGEDGRNAAGSVLRDSSGQWMRGFAVNLGVGQVLEAELWGIYLGLKIAWDIGCSA 104
Query: 153 IVIETDSTEACRLLRLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+V+E+DST A LL H ++ C I + +W+ I H +R
Sbjct: 105 VVLESDSTTAVHLLHKNVEDLHPLVAMLWGCQDYI-NKNWVCSIHHVYR 152
>gb|EMJ12120.1| hypothetical protein PRUPE_ppb019242mg, partial [Prunus persica]
Length = 174
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/95 (32%), Positives = 53/95 (55%)
Frame = -3
Query: 291 GGIIRNDNGRFESAYVFSKGFGNALSAEIHGIFHGLKLARSHGYPQIVIETDSTEACRLL 112
GG+IRN G + + + + G+G+ L AE+ + HGL+LA+ ++++ETDS RLL
Sbjct: 36 GGLIRNSAGDWIAGFSANLGYGDILKAELSALCHGLELAQRMQVTKLIVETDSKPVLRLL 95
Query: 111 RLRHLQTHADFFVIQRCWRMIDDHSWLVRIQHTHR 7
+L+ H +++ R SW +I H +R
Sbjct: 96 N-ANLEDHHPLLILRNKCRSYWKSSWDCKINHEYR 129