BLASTX nr result

ID: Rheum21_contig00032272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032272
         (345 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634468.1| PREDICTED: uncharacterized protein LOC100853...    60   2e-07
gb|AAF79794.1|AC020646_17 T32E20.35 [Arabidopsis thaliana] gi|12...    57   3e-06
ref|NP_001185146.1| uncharacterized protein [Arabidopsis thalian...    57   3e-06
ref|NP_564476.2| uncharacterized protein [Arabidopsis thaliana] ...    57   3e-06
ref|XP_002891222.1| predicted protein [Arabidopsis lyrata subsp....    55   1e-05

>ref|XP_003634468.1| PREDICTED: uncharacterized protein LOC100853421 [Vitis vinifera]
          Length = 192

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = -3

Query: 325 RGKTRVDL--DVNAAKTIDVAELDPPLPVVRRPAQRKPESGSGGEERENLWKRRSRGSAL 152
           RG +++D   D N A  I+V +LDPPLPV++R  QR    G GG+  E+LWKRRS G AL
Sbjct: 118 RGSSKIDCHEDENYATVINVVDLDPPLPVIKRVQQR----GDGGDS-ESLWKRRSGGVAL 172

Query: 151 GSLQVQSI 128
            +LQ+Q +
Sbjct: 173 KTLQLQPL 180


>gb|AAF79794.1|AC020646_17 T32E20.35 [Arabidopsis thaliana]
           gi|12321716|gb|AAG50899.1|AC068901_8 hypothetical
           protein [Arabidopsis thaliana]
          Length = 181

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = -3

Query: 280 IDVAELDPPLPVVRRPAQRKPESGSGGEERENLWKRRSRGSALGSLQVQS 131
           IDVAELDPPLPVV++      + G+G +  ENLWKRRS G  L SLQ+Q+
Sbjct: 125 IDVAELDPPLPVVKKTH----DGGAGDKAAENLWKRRSGGCQLRSLQIQT 170


>ref|NP_001185146.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332193758|gb|AEE31879.1| uncharacterized protein
           AT1G36940 [Arabidopsis thaliana]
          Length = 219

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = -3

Query: 280 IDVAELDPPLPVVRRPAQRKPESGSGGEERENLWKRRSRGSALGSLQVQS 131
           IDVAELDPPLPVV++      + G+G +  ENLWKRRS G  L SLQ+Q+
Sbjct: 126 IDVAELDPPLPVVKKTH----DGGAGDKAAENLWKRRSGGCQLRSLQIQT 171


>ref|NP_564476.2| uncharacterized protein [Arabidopsis thaliana]
           gi|49823480|gb|AAT68723.1| hypothetical protein
           At1g36940 [Arabidopsis thaliana]
           gi|55740515|gb|AAV63850.1| hypothetical protein
           At1g36940 [Arabidopsis thaliana]
           gi|149944305|gb|ABR46195.1| At1g36940 [Arabidopsis
           thaliana] gi|332193757|gb|AEE31878.1| uncharacterized
           protein AT1G36940 [Arabidopsis thaliana]
          Length = 182

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = -3

Query: 280 IDVAELDPPLPVVRRPAQRKPESGSGGEERENLWKRRSRGSALGSLQVQS 131
           IDVAELDPPLPVV++      + G+G +  ENLWKRRS G  L SLQ+Q+
Sbjct: 126 IDVAELDPPLPVVKKTH----DGGAGDKAAENLWKRRSGGCQLRSLQIQT 171


>ref|XP_002891222.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337064|gb|EFH67481.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = -3

Query: 325 RGKTRV-DLDVNAAKTIDVAELDPPLPVVRRPAQRKPESGSGGEERENLWKRRSRGSA-L 152
           RG+ R  D        IDVAELDPPLPVV+    +  + G+G +  ENLWKRRS GS  L
Sbjct: 108 RGRIRKEDFGNKKIAVIDVAELDPPLPVVK----KTHDGGAGDKAAENLWKRRSGGSCQL 163

Query: 151 GSLQVQ 134
            SLQ+Q
Sbjct: 164 RSLQIQ 169


Top