BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00032223
         (538 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH47360.1| RNA polymerase beta subunit [Pelargonium cotyledo...   139   2e-62
ref|YP_008994560.1| RNA polymerase beta subunit (chloroplast) [P...   132   9e-61
gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)...   217   1e-54
gb|ADH94335.1| RNA polymerase beta subunit [Syzygium cumini]          217   1e-54
ref|YP_008576125.1| RNA polymerase beta subunit (chloroplast) [E...   216   2e-54
dbj|BAC77552.1| RNA polymerase beta subunit [Nicotiana sylvestris]    216   2e-54
ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [W...   216   3e-54
ref|YP_004769804.1| RNA polymerase beta subunit (chloroplast) [W...   216   3e-54
gb|ACC93301.1| RNA polymerase beta subunit [Acicarpha spathulata]     216   3e-54
gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chl...   216   3e-54
ref|YP_008577230.1| RNA polymerase beta subunit (chloroplast) [E...   216   3e-54
ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasilien...   215   5e-54
gb|ADG85311.1| RNA polymerase beta subunit [Silene vulgaris]          215   5e-54
gb|ACC93384.1| RNA polymerase beta subunit [Stenopadus talaumifo...   215   5e-54
gb|ACC93321.1| RNA polymerase beta subunit [Chimantaea humilis] ...   215   5e-54
gb|AHE41624.1| RNA polymerase beta subunit protein, partial (chl...   215   6e-54
gb|AHE41623.1| RNA polymerase beta subunit protein, partial (chl...   215   6e-54
ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [P...   215   6e-54
ref|YP_008578165.1| RNA polymerase beta subunit (chloroplast) [S...   215   6e-54
ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [A...   215   6e-54

>gb|ACH47360.1| RNA polymerase beta subunit [Pelargonium cotyledonis]
          Length = 1074

 Score =  139 bits (349), Expect(2) = 2e-62
 Identities = 68/111 (61%), Positives = 87/111 (78%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           + G  VY  TIISD GGRL+L+IDRK R+WARVSRKQKISILVLLSAMG +L++I+ENVC
Sbjct: 144 YKGFTVYIATIISDCGGRLKLQIDRKGRLWARVSRKQKISILVLLSAMGSNLKDIIENVC 203

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKK 205
           YPEIF +FL+ K  +  GSKEN++LE YQ+F   GG    ++++  EL+KK
Sbjct: 204 YPEIFQAFLDKKFNENFGSKENSVLELYQKFVDAGGYTELNDTIYIELRKK 254



 Score =  126 bits (317), Expect(2) = 2e-62
 Identities = 58/70 (82%), Positives = 67/70 (95%)
 Frame = -3

Query: 212 KKKFFQQRCELGRIGRRNMNQRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMN 33
           +KKFF+QRC LGR+GR+N+N+RLNLDIPQN TFLLPRDILAA DHLIGM+FGMGTLDDMN
Sbjct: 252 RKKFFRQRCVLGRLGRQNINRRLNLDIPQNITFLLPRDILAATDHLIGMQFGMGTLDDMN 311

Query: 32  HLKNKRIRSL 3
           HLKNKR+RS+
Sbjct: 312 HLKNKRVRSV 321


>ref|YP_008994560.1| RNA polymerase beta subunit (chloroplast) [Pelargonium alternans]
           gi|540067639|gb|AGV02989.1| RNA polymerase beta subunit
           (chloroplast) [Pelargonium alternans]
          Length = 1084

 Score =  132 bits (332), Expect(2) = 9e-61
 Identities = 75/117 (64%), Positives = 90/117 (76%), Gaps = 6/117 (5%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           + G  VY  TIISD+GGRL+LEID K RIWARVSRKQKISILVLLSAMG +L++I+ENVC
Sbjct: 145 YKGFTVYIATIISDYGGRLKLEIDSKERIWARVSRKQKISILVLLSAMGSNLKDIIENVC 204

Query: 357 YPEIFLSFLNDKEKKK---IGSKENAILEFYQQFACVGGD---PVFSESLCKELKKK 205
           YPEIFL+FL +KEKKK     SKE A+LE YQ+F  VGG       S+++ KEL+ K
Sbjct: 205 YPEIFLAFL-EKEKKKNKNFWSKEEAVLELYQKF--VGGSEELEELSDAIYKELRTK 258



 Score =  127 bits (319), Expect(2) = 9e-61
 Identities = 59/70 (84%), Positives = 66/70 (94%)
 Frame = -3

Query: 212 KKKFFQQRCELGRIGRRNMNQRLNLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMN 33
           + KFF+QRC LGR+GR+N+N+RLNLDIPQN TFLLPRDILAA DHLIGMKFGMGTLDDMN
Sbjct: 256 RTKFFRQRCVLGRLGRQNINRRLNLDIPQNTTFLLPRDILAATDHLIGMKFGMGTLDDMN 315

Query: 32  HLKNKRIRSL 3
           HLKNKRIRS+
Sbjct: 316 HLKNKRIRSV 325


>gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis
           mollis]
          Length = 1070

 Score =  217 bits (553), Expect = 1e-54
 Identities = 106/119 (89%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMGL+LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  147 bits (370), Expect = 2e-33
 Identities = 74/107 (69%), Positives = 80/107 (74%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMNQRL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNQRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLI MKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIRMKFGMGTLDDMNHLKNKRIRSV 317


>gb|ADH94335.1| RNA polymerase beta subunit [Syzygium cumini]
          Length = 1072

 Score =  217 bits (553), Expect = 1e-54
 Identities = 106/119 (89%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMGL+LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/107 (69%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>ref|YP_008576125.1| RNA polymerase beta subunit (chloroplast) [Eucalyptus marginata]
           gi|442567177|gb|AGC57364.1| RNA polymerase beta subunit
           (chloroplast) [Eucalyptus marginata]
          Length = 1072

 Score =  216 bits (551), Expect = 2e-54
 Identities = 106/119 (89%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKFFQQRCEL 258



 Score =  150 bits (378), Expect = 2e-34
 Identities = 75/107 (70%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  KKKFFQQRCELGRIGRRNMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKFFQQRCELGRIGRRNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>dbj|BAC77552.1| RNA polymerase beta subunit [Nicotiana sylvestris]
          Length = 248

 Score =  216 bits (551), Expect = 2e-54
 Identities = 105/119 (88%), Positives = 113/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGL+LREILENVC
Sbjct: 126 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVC 185

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFL+DKE+KKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 186 YPEIFLSFLSDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 244


>ref|YP_004769939.1| RNA polymerase beta subunit (chloroplast) [Wolffia australiana]
           gi|341834231|gb|AEK94500.1| RNA polymerase beta subunit
           [Wolffia australiana]
          Length = 1072

 Score =  216 bits (550), Expect = 3e-54
 Identities = 105/119 (88%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYT TIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGL+LREIL+NVC
Sbjct: 140 HNGISVYTSTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/107 (67%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRN+NQRL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNINQRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIP+NNTFLLPRD+LAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPENNTFLLPRDVLAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>ref|YP_004769804.1| RNA polymerase beta subunit (chloroplast) [Wolffiella lingulata]
           gi|341834147|gb|AEK94417.1| RNA polymerase beta subunit
           [Wolffiella lingulata]
          Length = 1072

 Score =  216 bits (550), Expect = 3e-54
 Identities = 105/119 (88%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYT TIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGL+LREIL+NVC
Sbjct: 140 HNGISVYTSTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/107 (66%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRN+NQRL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNINQRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIP++NTFLLPRD+LAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPEDNTFLLPRDVLAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>gb|ACC93301.1| RNA polymerase beta subunit [Acicarpha spathulata]
          Length = 1026

 Score =  216 bits (550), Expect = 3e-54
 Identities = 105/111 (94%), Positives = 110/111 (99%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++ YTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGL+LREILENVC
Sbjct: 96  HNGISAYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILENVC 155

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKK 205
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCK+L+KK
Sbjct: 156 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKK 206



 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/107 (68%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     ++ +KKFF QRCELGRIGRRNMN+RL
Sbjct: 167 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKKFFLQRCELGRIGRRNMNRRL 226

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 227 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 273


>gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Cercidiphyllum japonicum]
          Length = 520

 Score =  216 bits (549), Expect = 3e-54
 Identities = 108/130 (83%), Positives = 116/130 (89%), Gaps = 4/130 (3%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 123 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 182

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI- 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  + 
Sbjct: 183 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELG 242

Query: 180 ---RKNWSTK 160
              R+N + K
Sbjct: 243 RIGRRNMNRK 252



 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/107 (68%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN++L
Sbjct: 194 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRKL 253

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 254 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 300


>ref|YP_008577230.1| RNA polymerase beta subunit (chloroplast) [Eucalyptus
           salmonophloia] gi|442568467|gb|AGC58639.1| RNA
           polymerase beta subunit (chloroplast) [Eucalyptus
           salmonophloia]
          Length = 1072

 Score =  216 bits (549), Expect = 3e-54
 Identities = 108/130 (83%), Positives = 116/130 (89%), Gaps = 4/130 (3%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI- 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  + 
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELG 259

Query: 180 ---RKNWSTK 160
              R+N + K
Sbjct: 260 RIGRRNMNRK 269



 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/107 (68%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN++L
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRKL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasiliensis]
           gi|308523494|gb|ADO33544.1| RNA polymerase beta subunit
           [Hevea brasiliensis]
          Length = 1070

 Score =  215 bits (548), Expect = 5e-54
 Identities = 104/121 (85%), Positives = 112/121 (92%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGR+ELEIDRKARIWARVSRKQKISILVL SAMGL+LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRVELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRIR 178
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQF CVGGDP+FSESLCKEL+KK    +  + 
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFTCVGGDPIFSESLCKELQKKFFQQRCELG 259

Query: 177 K 175
           K
Sbjct: 260 K 260



 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/107 (64%), Positives = 77/107 (71%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELG+IGR NMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFTCVGGDPIFSESLCKELQKKFFQQRCELGKIGRLNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIP NNTFLLPRDILAAAD LI MKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPHNNTFLLPRDILAAADRLIEMKFGMGTLDDMNHLKNKRIRSV 317


>gb|ADG85311.1| RNA polymerase beta subunit [Silene vulgaris]
          Length = 127

 Score =  215 bits (548), Expect = 5e-54
 Identities = 104/116 (89%), Positives = 111/116 (95%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGL+L+EIL+NVC
Sbjct: 11  HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLKEILDNVC 70

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTK 190
           YPEIFLSFLNDK+KKK GSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    K
Sbjct: 71  YPEIFLSFLNDKDKKKFGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQK 126


>gb|ACC93384.1| RNA polymerase beta subunit [Stenopadus talaumifolius]
          Length = 1026

 Score =  215 bits (548), Expect = 5e-54
 Identities = 103/119 (86%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIW RVSRKQK+SILVLLSAMGL++REILENVC
Sbjct: 98  HNGISVYTGTIISDWGGRLELEIDRKARIWVRVSRKQKLSILVLLSAMGLNIREILENVC 157

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCK+L+KK    +  +
Sbjct: 158 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKKFFQQRCEL 216



 Score =  141 bits (356), Expect = 8e-32
 Identities = 71/107 (66%), Positives = 80/107 (74%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     ++ +KKFFQQRCELG IGRRNMN+RL
Sbjct: 169 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKKFFQQRCELGGIGRRNMNRRL 228

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAAD LIG+KFGMGTLDDMNHLKNKRIRS+
Sbjct: 229 NLDIPQNNTFLLPRDILAAADRLIGIKFGMGTLDDMNHLKNKRIRSV 275


>gb|ACC93321.1| RNA polymerase beta subunit [Chimantaea humilis]
           gi|186885959|gb|ACC93387.1| RNA polymerase beta subunit
           [Stomatochaeta condensata]
          Length = 1026

 Score =  215 bits (548), Expect = 5e-54
 Identities = 103/119 (86%), Positives = 112/119 (94%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIW RVSRKQK+SILVLLSAMGL++REILENVC
Sbjct: 98  HNGISVYTGTIISDWGGRLELEIDRKARIWVRVSRKQKLSILVLLSAMGLNIREILENVC 157

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCK+L+KK    +  +
Sbjct: 158 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKKFFQQRCEL 216



 Score =  141 bits (356), Expect = 8e-32
 Identities = 71/107 (66%), Positives = 80/107 (74%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     ++ +KKFFQQRCELG IGRRNMN+RL
Sbjct: 169 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKDLQKKFFQQRCELGGIGRRNMNRRL 228

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAAD LIG+KFGMGTLDDMNHLKNKRIRS+
Sbjct: 229 NLDIPQNNTFLLPRDILAAADRLIGIKFGMGTLDDMNHLKNKRIRSV 275


>gb|AHE41624.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Exbucklandia populnea]
          Length = 788

 Score =  215 bits (547), Expect = 6e-54
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 121 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 180

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 181 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 239



 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/107 (68%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 192 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRL 251

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTL+DMNHLKNKRIRS+
Sbjct: 252 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLNDMNHLKNKRIRSV 298


>gb|AHE41623.1| RNA polymerase beta subunit protein, partial (chloroplast)
           [Disanthus cercidifolius subsp. longipes]
          Length = 794

 Score =  215 bits (547), Expect = 6e-54
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 124 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 183

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 184 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 242



 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/107 (69%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 195 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNKRL 254

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 255 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 301


>ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [Penthorum chinense]
           gi|403226773|gb|AFR25652.1| RNA polymerase beta subunit
           (chloroplast) [Penthorum chinense]
          Length = 1070

 Score =  215 bits (547), Expect = 6e-54
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  144 bits (363), Expect = 1e-32
 Identities = 72/107 (67%), Positives = 79/107 (73%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIP NNTFLLPRDILAAADHLIGMKFGMG LDDMNHLKNKRIRS+
Sbjct: 271 NLDIPHNNTFLLPRDILAAADHLIGMKFGMGILDDMNHLKNKRIRSV 317


>ref|YP_008578165.1| RNA polymerase beta subunit (chloroplast) [Stockwellia quadrifida]
           gi|442569413|gb|AGC59574.1| RNA polymerase beta subunit
           (chloroplast) [Stockwellia quadrifida]
          Length = 1072

 Score =  215 bits (547), Expect = 6e-54
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/107 (69%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317


>ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [Allosyncarpia ternata]
           gi|442569327|gb|AGC59489.1| RNA polymerase beta subunit
           (chloroplast) [Allosyncarpia ternata]
          Length = 1072

 Score =  215 bits (547), Expect = 6e-54
 Identities = 105/119 (88%), Positives = 111/119 (93%)
 Frame = -2

Query: 537 HNGVAVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGLSLREILENVC 358
           HNG++VYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVL SAMG +LREILENVC
Sbjct: 140 HNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVC 199

Query: 357 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELKKKILSTKMRI 181
           YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKEL+KK    +  +
Sbjct: 200 YPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCEL 258



 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/107 (69%), Positives = 81/107 (75%)
 Frame = -3

Query: 323 RRKKKLDQKKMRFWSFINNLLV*AGTRYFLNPYVRN*KKKFFQQRCELGRIGRRNMNQRL 144
           + KKK+  K+     F        G   F     +  +KKFFQQRCELGRIGRRNMN+RL
Sbjct: 211 KEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRL 270

Query: 143 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSL 3
           NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRS+
Sbjct: 271 NLDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSV 317