BLASTX nr result
ID: Rheum21_contig00032220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00032220
(329 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ02917.1| hypothetical protein PRUPE_ppa003482mg [Prunus pe... 140 1e-31
ref|XP_003603974.1| Pentatricopeptide repeat-containing protein ... 135 4e-30
ref|XP_006349085.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|XP_004251020.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
gb|AAS79604.1| putative pentatricopeptide repeat-containing prot... 131 8e-29
gb|EXC04410.1| hypothetical protein L484_008746 [Morus notabilis] 130 1e-28
ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr... 124 2e-26
ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containi... 123 2e-26
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera] 121 1e-25
ref|XP_006655943.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
emb|CBI28813.3| unnamed protein product [Vitis vinifera] 120 2e-25
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
emb|CBI27471.3| unnamed protein product [Vitis vinifera] 119 3e-25
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S... 119 3e-25
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
>gb|EMJ02917.1| hypothetical protein PRUPE_ppa003482mg [Prunus persica]
Length = 571
Score = 140 bits (354), Expect = 1e-31
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKAFQL HHSEKLA+AFGLIRT+P S+IRIVKNLRSCE+CHAVMKLISKVY REI++RDR
Sbjct: 495 EKAFQLSHHSEKLALAFGLIRTSPGSEIRIVKNLRSCENCHAVMKLISKVYQREIIMRDR 554
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHFK G CSC DYW
Sbjct: 555 IRFHHFKNGDCSCRDYW 571
>ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 566
Score = 135 bits (341), Expect = 4e-30
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLA+A+GLIRT P S+IRIVKNLRSCEDCH MKLISKVY R+I+VRDR
Sbjct: 490 EKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRDIIVRDR 549
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHFK G CSC DYW
Sbjct: 550 IRFHHFKNGDCSCKDYW 566
>ref|XP_006349085.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum tuberosum]
Length = 578
Score = 135 bits (339), Expect = 7e-30
Identities = 61/77 (79%), Positives = 70/77 (90%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLAV+FGLIRT+P + IRIVKNLRSCEDCH+ MKLISK+Y REI++RDR
Sbjct: 502 EKASQLLHHSEKLAVSFGLIRTDPGTVIRIVKNLRSCEDCHSFMKLISKLYQREIIIRDR 561
Query: 182 IRFHHFKEGTCSCGDYW 232
IR+HHFK+G CSCGD W
Sbjct: 562 IRYHHFKDGECSCGDRW 578
>ref|XP_004251020.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum lycopersicum]
Length = 581
Score = 135 bits (339), Expect = 7e-30
Identities = 61/77 (79%), Positives = 70/77 (90%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLAV+FGLIRT+P + IRIVKNLRSCEDCH+ MKLISK+Y REI++RDR
Sbjct: 505 EKASQLLHHSEKLAVSFGLIRTDPGTVIRIVKNLRSCEDCHSFMKLISKLYHREIIIRDR 564
Query: 182 IRFHHFKEGTCSCGDYW 232
IR+HHFK+G CSCGD W
Sbjct: 565 IRYHHFKDGECSCGDRW 581
>ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera] gi|297744424|emb|CBI37686.3| unnamed
protein product [Vitis vinifera]
Length = 571
Score = 134 bits (337), Expect = 1e-29
Identities = 60/77 (77%), Positives = 70/77 (90%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKAFQL HHSEKLAVAFGLI+T+P ++IRIVKNLRSCEDCH+V+KLISK+Y ++I+VRDR
Sbjct: 495 EKAFQLRHHSEKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDR 554
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHF G CSC DYW
Sbjct: 555 IRFHHFINGDCSCKDYW 571
>ref|XP_004500791.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cicer arietinum]
Length = 576
Score = 132 bits (333), Expect = 4e-29
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLA+A+GLIRT P S+IRIVKNLRSCEDCH MKLISKVY R+I+VRDR
Sbjct: 500 EKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRDIIVRDR 559
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHF G CSC DYW
Sbjct: 560 IRFHHFINGDCSCKDYW 576
>gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida] gi|118562903|dbj|BAF37793.1| hypothetical
protein [Ipomoea trifida]
Length = 575
Score = 131 bits (330), Expect = 8e-29
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLAV+FGL++++P S IRIVKNLRSCEDCH+ MKLISKVY R+I+VRDR
Sbjct: 499 EKASQLLHHSEKLAVSFGLVKSSPGSVIRIVKNLRSCEDCHSFMKLISKVYQRDIIVRDR 558
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHF G CSCGD W
Sbjct: 559 IRFHHFSGGNCSCGDRW 575
>gb|EXC04410.1| hypothetical protein L484_008746 [Morus notabilis]
Length = 248
Score = 130 bits (328), Expect = 1e-28
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKAFQL HHSEKLA+AFGLI+T+P S+IRI KNLRSCEDCHA MK+ISK+Y R+I++RDR
Sbjct: 172 EKAFQLSHHSEKLALAFGLIKTSPGSEIRIAKNLRSCEDCHAFMKVISKIYQRDIIMRDR 231
Query: 182 IRFHHFKEGTCSCGDYW 232
I FHHF G CSC DYW
Sbjct: 232 ILFHHFSNGDCSCRDYW 248
>ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 129 bits (325), Expect = 3e-28
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLA+A+GLIR S IRIVKNLRSCEDCH MKLISK+Y R+I+VRDR
Sbjct: 496 EKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEFMKLISKIYKRDIIVRDR 555
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHFK G CSC DYW
Sbjct: 556 IRFHHFKNGECSCKDYW 572
>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
gi|568824869|ref|XP_006466814.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557527644|gb|ESR38894.1| hypothetical protein
CICLE_v10025166mg [Citrus clementina]
Length = 622
Score = 124 bits (310), Expect = 2e-26
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK + HSEKLA+AFGLI+T P IRI+KNLR CEDCH VMKLISK+Y REIV+RDR
Sbjct: 546 EKETAIHQHSEKLAIAFGLIKTEPGVTIRIIKNLRVCEDCHTVMKLISKIYDREIVMRDR 605
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHFK+G C+CGDYW
Sbjct: 606 TRFHHFKDGRCTCGDYW 622
>ref|XP_003523513.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 542
Score = 123 bits (309), Expect = 2e-26
Identities = 59/77 (76%), Positives = 63/77 (81%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EKA QLLHHSEKLA+A+GLIR S I IVKNLRSCEDCH MKLISK+ R+IVVRDR
Sbjct: 466 EKAVQLLHHSEKLALAYGLIRIGHGSTIWIVKNLRSCEDCHEFMKLISKICKRDIVVRDR 525
Query: 182 IRFHHFKEGTCSCGDYW 232
IRFHHFK G CSC DYW
Sbjct: 526 IRFHHFKNGECSCKDYW 542
>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 122 bits (305), Expect = 6e-26
Identities = 53/72 (73%), Positives = 61/72 (84%)
Frame = +2
Query: 17 LLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDRIRFHH 196
LL HSEKLA+AFGL+ T P++ IRIVKNLR C DCH +K ISKVY REI+VRDRIR+HH
Sbjct: 538 LLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHH 597
Query: 197 FKEGTCSCGDYW 232
FK+GTCSC DYW
Sbjct: 598 FKDGTCSCNDYW 609
>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 121 bits (303), Expect = 1e-25
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK L +HSEKLA+AFGLI T P + IRIVKNLR C DCHA KL+SK+YGR I+VRDR
Sbjct: 655 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 714
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHF+EG CSCGDYW
Sbjct: 715 NRFHHFREGYCSCGDYW 731
>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 121 bits (303), Expect = 1e-25
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK L +HSEKLA+AFGLI T P + IRIVKNLR C DCHA KL+SK+YGR I+VRDR
Sbjct: 695 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 754
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHF+EG CSCGDYW
Sbjct: 755 NRFHHFREGYCSCGDYW 771
>ref|XP_006655943.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Oryza brachyantha]
Length = 598
Score = 120 bits (301), Expect = 2e-25
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
+K LLHHSEKLA+AFGL+R PR +RI KNLR C DCH K++S+V+ REIVVRDR
Sbjct: 522 DKEAALLHHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKIVSRVFDREIVVRDR 581
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHFK+GTCSC DYW
Sbjct: 582 NRFHHFKDGTCSCKDYW 598
>emb|CBI28813.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 120 bits (300), Expect = 2e-25
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK L HHSEKLA+AFGLI+T+P + IRI KNLR C DCH+ KLISK+Y REI+VRDR
Sbjct: 424 EKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDR 483
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHF++G+CSC D+W
Sbjct: 484 CRFHHFRDGSCSCMDFW 500
>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 120 bits (300), Expect = 2e-25
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK L HHSEKLA+AFGLI+T+P + IRI KNLR C DCH+ KLISK+Y REI+VRDR
Sbjct: 564 EKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDR 623
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHF++G+CSC D+W
Sbjct: 624 CRFHHFRDGSCSCMDFW 640
>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 119 bits (299), Expect = 3e-25
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK + HHSEKLAV FGLI T P IRIVKNLR CEDCH V+KLISKVY REI++RDR
Sbjct: 498 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 557
Query: 182 IRFHHFKEGTCSCGDYW 232
RFH FK+G C+CGDYW
Sbjct: 558 TRFHLFKDGNCTCGDYW 574
>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein
SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 119 bits (299), Expect = 3e-25
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK + HHSEKLA+AFGL++ +P + IR+ KNLR C DCH+ KLISKVY REIVVRDR
Sbjct: 617 EKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDR 676
Query: 182 IRFHHFKEGTCSCGDYW 232
RFHHFK+GTCSC DYW
Sbjct: 677 NRFHHFKDGTCSCNDYW 693
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 119 bits (299), Expect = 3e-25
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 2 EKAFQLLHHSEKLAVAFGLIRTNPRSQIRIVKNLRSCEDCHAVMKLISKVYGREIVVRDR 181
EK + HHSEKLAV FGLI T P IRIVKNLR CEDCH V+KLISKVY REI++RDR
Sbjct: 546 EKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDR 605
Query: 182 IRFHHFKEGTCSCGDYW 232
RFH FK+G C+CGDYW
Sbjct: 606 TRFHLFKDGNCTCGDYW 622