BLASTX nr result
ID: Rheum21_contig00031881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031881
(228 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 91 2e-16
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus pe... 86 4e-15
gb|EXB73690.1| hypothetical protein L484_026851 [Morus notabilis] 84 3e-14
ref|XP_003601696.1| Pentatricopeptide repeat-containing protein ... 80 2e-13
ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citr... 79 5e-13
ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protei... 79 8e-13
ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,... 78 1e-12
ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arab... 77 2e-12
ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutr... 77 3e-12
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar... 76 5e-12
ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Caps... 75 1e-11
ref|XP_002298671.2| pentatricopeptide repeat-containing family p... 74 2e-11
ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
pir||E71401 probable selenium-binding protein - Arabidopsis thal... 74 3e-11
gb|ESW35800.1| hypothetical protein PHAVU_001G265800g [Phaseolus... 74 3e-11
>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF + PV+NL SW+ALISGL+QSGH +F++ N MRRE D VDP +LSS+V G AN A
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 LLELGKQIHGLVIAL 267
>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF + PV+NL SW+ALISGL+QSGH +F++ N MRRE D VDP +LSS+V G AN A
Sbjct: 193 LFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 LLELGKQIHGLVIAL 267
>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/75 (60%), Positives = 57/75 (76%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF +MPVKNLLSW+ALISGLVQSG+ +F + MR + D VDP+ILSSI+ +AN A
Sbjct: 193 LFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLA 252
Query: 46 SLELGKQLHCFVLVL 2
L LGKQ+HC V++L
Sbjct: 253 VLGLGKQIHCLVILL 267
>gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus persica]
Length = 610
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
+F+ +P+KNL SW+ALISGLVQSGH AF + MRRE VDP +LSSIV AN A
Sbjct: 193 MFESLPIKNLFSWTALISGLVQSGHSVDAFYLFIEMRREGVHIVDPLVLSSIVGACANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 VLELGKQVHSLVIRL 267
>gb|EXB73690.1| hypothetical protein L484_026851 [Morus notabilis]
Length = 562
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF + P +NL SW+ LISGLVQSG+ AF + M+RE D +DP +LSSIV AN A
Sbjct: 194 LFQQAPFRNLFSWTVLISGLVQSGNGIDAFRLFIKMQRENIDIIDPLVLSSIVGACANLA 253
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+HC ++ L
Sbjct: 254 VLELGKQVHCLIIAL 268
>ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 616
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF E P KNL +W+ALISGLVQSG+ A + MRRE DP +LSS+V AN A
Sbjct: 199 LFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSA 258
Query: 46 SLELGKQLHCFVLVL 2
ELGKQ+HC V+ L
Sbjct: 259 VRELGKQVHCVVITL 273
>ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citrus clementina]
gi|557522907|gb|ESR34274.1| hypothetical protein
CICLE_v10004567mg [Citrus clementina]
Length = 610
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
+F++ PV+NL W+AL+SGLVQS + AF+ MRRE D VDP +LSSIV AN A
Sbjct: 193 IFEQAPVRNLFLWTALVSGLVQSRNEIDAFDSFIEMRREGVDIVDPLVLSSIVGACANFA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 VLELGKQIHGLVIAL 267
>ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 610
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
+F +MPVK+L SW+ALISGLVQSG+ A + MRRE D VDP +LSS V AN A
Sbjct: 193 MFGKMPVKSLFSWTALISGLVQSGNGVDALYLFIEMRRERVDIVDPLVLSSTVGACANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 VLELGKQVHGLVIRL 267
>gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 610
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF +P+KNL +W++LISGLVQSG+ AF + MRRE +DP +LSSI+ +AN A
Sbjct: 193 LFLRVPLKNLFAWTSLISGLVQSGNEVDAFGLFIEMRREGVTIIDPLVLSSIIGASANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 MLELGKQVHGLVIGL 267
>ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 610
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
+F++ PV+NL W+AL+SGLVQS + AF MRRE D VDP +LSSIV AN A
Sbjct: 193 IFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 VLELGKQIHGLVIAL 267
>ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 623
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/75 (54%), Positives = 51/75 (68%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
+F++ PV+NL W+AL+SGLVQS + AF MRRE D VDP +LSSIV AN A
Sbjct: 193 IFEQAPVRNLFLWTALVSGLVQSRNEIDAFYSFIEMRREGVDIVDPLVLSSIVGACANFA 252
Query: 46 SLELGKQLHCFVLVL 2
LELGKQ+H V+ L
Sbjct: 253 VLELGKQIHGLVIAL 267
>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 344
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/75 (54%), Positives = 48/75 (64%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF PVKNL SW+ALISGLVQSG + MRRE D +DP +LSS+V AN A
Sbjct: 193 LFSSFPVKNLYSWTALISGLVQSGKGIDGCYLFLEMRREGIDIIDPLVLSSVVGACANLA 252
Query: 46 SLELGKQLHCFVLVL 2
LE GKQLH ++ L
Sbjct: 253 VLEFGKQLHGLIIAL 267
>ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata] gi|297314154|gb|EFH44577.1| hypothetical protein
ARALYDRAFT_330113 [Arabidopsis lyrata subsp. lyrata]
Length = 1057
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF +PVKNL SW+ALISG VQSG AF+V MRRE D +DP +LSSIV AN A
Sbjct: 130 LFRRLPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 189
Query: 46 SLELGKQLHCFVLVL 2
+ G+Q+H V+ L
Sbjct: 190 ASIAGRQVHGLVIAL 204
>ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutrema salsugineum]
gi|557115989|gb|ESQ56272.1| hypothetical protein
EUTSA_v10024703mg [Eutrema salsugineum]
Length = 609
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF E+P KNL SW+ALISG VQSG AF+V MRRE D +DP +LSSIV AN A
Sbjct: 190 LFRELPAKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 249
Query: 46 SLELGKQLHCFVLVL 2
+ G+Q+H V+ L
Sbjct: 250 ASIAGRQVHGLVISL 264
>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF +PVKNL SW+ALISG VQSG AF+V MRRE D +DP +LSSIV AN A
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 46 SLELGKQLHCFVLVL 2
+ G+Q+H V+ L
Sbjct: 253 ASIAGRQVHGLVIAL 267
>ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Capsella rubella]
gi|482552060|gb|EOA16253.1| hypothetical protein
CARUB_v10004398mg [Capsella rubella]
Length = 612
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/75 (53%), Positives = 50/75 (66%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF ++P KNL SW+ALISG VQSG AF+V MRRE D +DP +LSSIV AN A
Sbjct: 193 LFRKLPAKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 46 SLELGKQLHCFVLVL 2
+ G+Q+H V+ L
Sbjct: 253 ASIAGRQVHGLVIGL 267
>ref|XP_002298671.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550348740|gb|EEE83476.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 634
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/73 (54%), Positives = 48/73 (65%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF PV+NL SW+ALISGLVQSG+ + MRRE D VDP +LSS+V AN A
Sbjct: 217 LFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLA 276
Query: 46 SLELGKQLHCFVL 8
L LGKQ+H V+
Sbjct: 277 VLGLGKQIHGLVI 289
>ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/75 (50%), Positives = 49/75 (65%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF + P +NL +W+ALISGLVQSG+ AF++ MR E DP +LSS+V AN A
Sbjct: 194 LFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLA 253
Query: 46 SLELGKQLHCFVLVL 2
ELGKQ+H V+ L
Sbjct: 254 LWELGKQMHGVVITL 268
>pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/74 (54%), Positives = 49/74 (66%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF +PVKNL SW+ALISG VQSG AF+V MRRE D +DP +LSSIV AN A
Sbjct: 130 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 189
Query: 46 SLELGKQLHCFVLV 5
+ G+Q+H L+
Sbjct: 190 ASIAGRQVHGNALI 203
>gb|ESW35800.1| hypothetical protein PHAVU_001G265800g [Phaseolus vulgaris]
Length = 611
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = -3
Query: 226 LFDEMPVKNLLSWSALISGLVQSGHVTGAFNVLNNMRREWDDGVDPYILSSIVAGAANQA 47
LF + P +NL +W+ALISGLVQSG+ A ++ MR + DP +LSS+V +N A
Sbjct: 194 LFRQTPYRNLFAWTALISGLVQSGNGFEALHMFVEMRHDGVSVTDPLVLSSVVGACSNLA 253
Query: 46 SLELGKQLHCFVLVL 2
ELGKQ+HC V+ L
Sbjct: 254 LWELGKQMHCLVIAL 268