BLASTX nr result
ID: Rheum21_contig00031684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031684
(265 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466567.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 93 4e-17
ref|XP_006426309.1| hypothetical protein CICLE_v10027093mg, part... 92 6e-17
ref|XP_006289746.1| hypothetical protein CARUB_v10003314mg [Caps... 92 7e-17
gb|EXB56540.1| E3 ubiquitin-protein ligase ATL6 [Morus notabilis] 91 2e-16
ref|NP_192650.1| putative RING-H2 finger protein ATL35 [Arabidop... 90 4e-16
gb|EPS66552.1| hypothetical protein M569_08227, partial [Genlise... 87 2e-15
ref|XP_004136427.1| PREDICTED: RING-H2 finger protein ATL11-like... 87 2e-15
ref|XP_002872428.1| zinc finger family protein [Arabidopsis lyra... 87 2e-15
emb|CBI19213.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit... 87 2e-15
ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 87 2e-15
ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citr... 87 2e-15
ref|XP_002872427.1| hypothetical protein ARALYDRAFT_489785 [Arab... 87 2e-15
ref|XP_002874373.1| zinc finger family protein [Arabidopsis lyra... 87 3e-15
ref|XP_006288100.1| hypothetical protein CARUB_v10001332mg [Caps... 86 4e-15
gb|EMJ23893.1| hypothetical protein PRUPE_ppa006365mg [Prunus pe... 86 4e-15
ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis t... 86 5e-15
gb|EOX91989.1| RING/U-box superfamily protein, putative [Theobro... 86 5e-15
gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabid... 86 5e-15
gb|AAD33584.1|AF132016_1 RING-H2 zinc finger protein ATL6 [Arabi... 86 5e-15
>ref|XP_006466567.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
Length = 291
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/76 (56%), Positives = 51/76 (67%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
PIFVYSA K GK A CA+CLSEF +++ LR LP CDH+FH CID WL SH TCP
Sbjct: 135 PIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPV 194
Query: 183 CRANVERAGREILLLE 230
CRAN+ E + L+
Sbjct: 195 CRANLTPESNEKVKLQ 210
>ref|XP_006426309.1| hypothetical protein CICLE_v10027093mg, partial [Citrus clementina]
gi|557528299|gb|ESR39549.1| hypothetical protein
CICLE_v10027093mg, partial [Citrus clementina]
Length = 548
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
PIFVYSA K GK A CA+CLSEF +++ LR LP CDH+FH CID WL SH TCP
Sbjct: 176 PIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPV 235
Query: 183 CRANVERAGREILLLENAENSA 248
CRAN+ + + L ++ N +
Sbjct: 236 CRANLTPESNKKVKLCDSNNES 257
>ref|XP_006289746.1| hypothetical protein CARUB_v10003314mg [Capsella rubella]
gi|482558452|gb|EOA22644.1| hypothetical protein
CARUB_v10003314mg [Capsella rubella]
Length = 345
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/86 (51%), Positives = 50/86 (58%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS KR GK CAICLS+F +++ LRWLP C H FH CID WL S TCP
Sbjct: 101 PSFLYSEVKRVKIGKGGVECAICLSDFEDQERLRWLPPCSHTFHANCIDVWLSSRSTCPV 160
Query: 183 CRANVERAGREILLLENAENSAAPEI 260
CRA IL LE ENS P +
Sbjct: 161 CRA--------ILSLEQGENSTYPSM 178
>gb|EXB56540.1| E3 ubiquitin-protein ligase ATL6 [Morus notabilis]
Length = 344
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F YSA K GK A CA+CL EF +++ LR +P CDH+FH C+DTWLESH TCP
Sbjct: 112 PTFTYSAVKGLKIGKGALECAVCLCEFEDDETLRLIPKCDHVFHMECVDTWLESHTTCPV 171
Query: 183 CRAN-VERAGR-----EILLLENAENSAAPE 257
CRAN V G E+ +E ++ APE
Sbjct: 172 CRANLVPEPGESLHRPELSDIEAQNDAVAPE 202
>ref|NP_192650.1| putative RING-H2 finger protein ATL35 [Arabidopsis thaliana]
gi|68565319|sp|Q9M0R6.1|ATL35_ARATH RecName:
Full=Putative RING-H2 finger protein ATL35; Flags:
Precursor gi|7267554|emb|CAB78035.1| putative protein
[Arabidopsis thaliana] gi|332657323|gb|AEE82723.1|
putative RING-H2 finger protein ATL35 [Arabidopsis
thaliana]
Length = 302
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
PIF+YS K GK CAICLSEF++++ LRW+P C H FH CID WL S TCP
Sbjct: 104 PIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPA 163
Query: 183 CRANV 197
CRAN+
Sbjct: 164 CRANL 168
>gb|EPS66552.1| hypothetical protein M569_08227, partial [Genlisea aurea]
Length = 288
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F YS K GK A CA+CL+EF + ALR LP CDH+FHR CI WLE H TCP
Sbjct: 67 PTFSYSEVKDHKIGKGALECAVCLNEFEEDDALRLLPKCDHVFHRECIGAWLEHHVTCPV 126
Query: 183 CRANVERAGR 212
CRAN+++ R
Sbjct: 127 CRANLQQPPR 136
>ref|XP_004136427.1| PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus]
gi|449532382|ref|XP_004173160.1| PREDICTED: RING-H2
finger protein ATL11-like [Cucumis sativus]
Length = 367
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYS K GK + CA+CL+EF N LR +P C H+FH GC+D WL SH TCP
Sbjct: 113 PTFVYSKVKGLKIGKSSLECAVCLNEFENSDMLRLIPKCSHVFHSGCVDAWLISHSTCPV 172
Query: 183 CRANV-ERAGREILLLENAENSAAPE 257
CRAN+ + G L + N + S E
Sbjct: 173 CRANLCPKPGEVTLSIFNFDPSTGSE 198
>ref|XP_002872428.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318265|gb|EFH48687.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 350
Score = 87.4 bits (215), Expect = 2e-15
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P+F+YS K GK CA+CLSEF +++ LRW+P C H FH CID WL S TCP
Sbjct: 104 PVFLYSEVKGLKIGKGGVECAVCLSEFEDQETLRWMPPCSHTFHANCIDVWLSSRSTCPV 163
Query: 183 CRANV 197
CRAN+
Sbjct: 164 CRANL 168
>emb|CBI19213.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYSA K GK+ CA+CL+EF +++ LR LP C+H+FH CID WL SH TCP
Sbjct: 113 PTFVYSAVKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPV 172
Query: 183 CRANV 197
CRAN+
Sbjct: 173 CRANL 177
>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
Length = 409
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYSA K GK+ CA+CL+EF +++ LR LP C+H+FH CID WL SH TCP
Sbjct: 124 PTFVYSAVKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPV 183
Query: 183 CRANV 197
CRAN+
Sbjct: 184 CRANL 188
>ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
Length = 443
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYS K GK A CA+CL+EF +++ LR +P CDH+FH CID WLESH TCP
Sbjct: 175 PTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPV 234
Query: 183 CRANV 197
CR+N+
Sbjct: 235 CRSNL 239
>ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citrus clementina]
gi|557535384|gb|ESR46502.1| hypothetical protein
CICLE_v10001478mg [Citrus clementina]
Length = 384
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYS K GK A CA+CL+EF +++ LR +P CDH+FH CID WLESH TCP
Sbjct: 116 PTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPV 175
Query: 183 CRANV 197
CR+N+
Sbjct: 176 CRSNL 180
>ref|XP_002872427.1| hypothetical protein ARALYDRAFT_489785 [Arabidopsis lyrata subsp.
lyrata] gi|297318264|gb|EFH48686.1| hypothetical protein
ARALYDRAFT_489785 [Arabidopsis lyrata subsp. lyrata]
Length = 177
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P+F+YS K GK CAICLSEF +++ LRW+P C H FH CID WL S TCP
Sbjct: 40 PLFLYSEVKGFKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSRSTCPV 99
Query: 183 CRANV 197
CRAN+
Sbjct: 100 CRANL 104
>ref|XP_002874373.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297320210|gb|EFH50632.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 370
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P FVYS K GK A CAICL+EF +++ LR LP CDH+FH CI WLE H TCP
Sbjct: 105 PTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLEGHVTCPV 164
Query: 183 CRAN-----VERAGREILL---LENAENSAAPE 257
CR N +E E ++ LE + SA PE
Sbjct: 165 CRTNLAEQKIEPVEPEAVVEIDLEAQQQSAVPE 197
>ref|XP_006288100.1| hypothetical protein CARUB_v10001332mg [Capsella rubella]
gi|482556806|gb|EOA20998.1| hypothetical protein
CARUB_v10001332mg [Capsella rubella]
Length = 345
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/65 (56%), Positives = 42/65 (64%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS K GK CAICLSEF +++ LRWLP C H FH CID WL S TCP
Sbjct: 106 PSFLYSEVKGVKIGKGGVECAICLSEFEDQERLRWLPPCSHTFHANCIDVWLASRSTCPV 165
Query: 183 CRANV 197
CRAN+
Sbjct: 166 CRANM 170
>gb|EMJ23893.1| hypothetical protein PRUPE_ppa006365mg [Prunus persica]
Length = 415
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS K GKD+ CA+CL+EF +++ LR +P CDH+FH CIDTWL SH TCP
Sbjct: 99 PAFLYSDVKGLQLGKDSLECAVCLNEFQDDETLRLIPKCDHVFHPDCIDTWLLSHSTCPV 158
Query: 183 CRAN-VERAGRE 215
CRA V + G E
Sbjct: 159 CRAYLVPKPGEE 170
>ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
gi|68565231|sp|Q8RXX9.2|ATL6_ARATH RecName: Full=E3
ubiquitin-protein ligase ATL6; AltName: Full=RING-H2
finger protein ATL6; Flags: Precursor
gi|70905101|gb|AAZ14076.1| At3g05200 [Arabidopsis
thaliana] gi|332640683|gb|AEE74204.1| E3
ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
Length = 398
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS K GK CAICL+EF +++ LR LP CDH+FH CID WLE+H TCP
Sbjct: 109 PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
Query: 183 CRANV 197
CRAN+
Sbjct: 169 CRANL 173
>gb|EOX91989.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 354
Score = 85.9 bits (211), Expect = 5e-15
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P+F+YS K GK A CA+CLSEF +++ALR +P C H+FH CID WLE H TCP
Sbjct: 100 PVFIYSCVKDLKMGKGALECAVCLSEFEDDEALRLIPKCSHVFHPDCIDAWLEYHVTCPV 159
Query: 183 CRANV 197
CRA +
Sbjct: 160 CRAKL 164
>gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
Length = 388
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS K GK CAICL+EF +++ LR LP CDH+FH CID WLE+H TCP
Sbjct: 109 PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
Query: 183 CRANV 197
CRAN+
Sbjct: 169 CRANL 173
>gb|AAD33584.1|AF132016_1 RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
Length = 398
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +3
Query: 3 PIFVYSAEKRPNFGKDAGLCAICLSEFLNEQALRWLPDCDHLFHRGCIDTWLESHKTCPC 182
P F+YS K GK CAICL+EF +++ LR LP CDH+FH CID WLE+H TCP
Sbjct: 109 PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
Query: 183 CRANV 197
CRAN+
Sbjct: 169 CRANL 173