BLASTX nr result
ID: Rheum21_contig00031547
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031547
(227 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233341.1| PREDICTED: paired amphipathic helix protein ... 74 3e-11
dbj|BAC43533.1| putative transcriptional regulatory protein [Ara... 72 8e-11
ref|NP_001190311.1| paired amphipathic helix protein Sin3-like 2... 72 8e-11
ref|NP_197006.2| paired amphipathic helix protein Sin3-like 2 [A... 72 8e-11
emb|CAC01821.1| transcriptional regulatory-like protein [Arabido... 72 8e-11
ref|XP_002873701.1| hypothetical protein ARALYDRAFT_488346 [Arab... 71 2e-10
ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ... 70 2e-10
emb|CBI35015.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_006290069.1| hypothetical protein CARUB_v10003707mg [Caps... 70 3e-10
ref|XP_006357135.1| PREDICTED: paired amphipathic helix protein ... 70 4e-10
ref|XP_006357134.1| PREDICTED: paired amphipathic helix protein ... 70 4e-10
ref|XP_006357133.1| PREDICTED: paired amphipathic helix protein ... 70 4e-10
ref|XP_006357132.1| PREDICTED: paired amphipathic helix protein ... 70 4e-10
gb|EOY03233.1| SIN3-like 2, putative isoform 2 [Theobroma cacao] 70 4e-10
gb|EOY03232.1| SIN3-like 2, putative isoform 1 [Theobroma cacao] 70 4e-10
ref|XP_006369904.1| hypothetical protein POPTR_0001s34800g [Popu... 67 2e-09
ref|XP_002300028.1| hypothetical protein POPTRDRAFT_797843 [Popu... 67 2e-09
ref|XP_006593647.1| PREDICTED: paired amphipathic helix protein ... 66 6e-09
ref|XP_006593646.1| PREDICTED: paired amphipathic helix protein ... 66 6e-09
ref|XP_006593645.1| PREDICTED: paired amphipathic helix protein ... 66 6e-09
>ref|XP_004233341.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
[Solanum lycopersicum]
Length = 1353
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 17/75 (22%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG---------------QKLTTDD 181
MKRL +D YA KRPFG+S+GESYGQ Q G G+GG QKLTT+D
Sbjct: 1 MKRLREDGYANPQFKRPFGSSKGESYGQSQLPGSGAGGGDGTGGGGTGASASTQKLTTND 60
Query: 182 ALQYLKEVKEMFQNQ 226
AL YLKEVK+MFQ+Q
Sbjct: 61 ALSYLKEVKDMFQDQ 75
>dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
Length = 543
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQNTG---VGSGG---QKLTTDDALQYLKEV 205
MKR+ DD YA KRP G+SRGESY Q TG +G GG QKLTTDDAL YLKEV
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 206 KEMFQNQ 226
KEMFQ+Q
Sbjct: 61 KEMFQDQ 67
>ref|NP_001190311.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
gi|332004723|gb|AED92106.1| paired amphipathic helix
protein Sin3-like 2 [Arabidopsis thaliana]
Length = 1355
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQNTG---VGSGG---QKLTTDDALQYLKEV 205
MKR+ DD YA KRP G+SRGESY Q TG +G GG QKLTTDDAL YLKEV
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 206 KEMFQNQ 226
KEMFQ+Q
Sbjct: 61 KEMFQDQ 67
>ref|NP_197006.2| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
gi|296439819|sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired
amphipathic helix protein Sin3-like 2
gi|332004722|gb|AED92105.1| paired amphipathic helix
protein Sin3-like 2 [Arabidopsis thaliana]
Length = 1367
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQNTG---VGSGG---QKLTTDDALQYLKEV 205
MKR+ DD YA KRP G+SRGESY Q TG +G GG QKLTTDDAL YLKEV
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 206 KEMFQNQ 226
KEMFQ+Q
Sbjct: 61 KEMFQDQ 67
>emb|CAC01821.1| transcriptional regulatory-like protein [Arabidopsis thaliana]
Length = 1377
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/67 (64%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQNTG---VGSGG---QKLTTDDALQYLKEV 205
MKR+ DD YA KRP G+SRGESY Q TG +G GG QKLTTDDAL YLKEV
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYEQSPITGGGSIGEGGINTQKLTTDDALTYLKEV 60
Query: 206 KEMFQNQ 226
KEMFQ+Q
Sbjct: 61 KEMFQDQ 67
>ref|XP_002873701.1| hypothetical protein ARALYDRAFT_488346 [Arabidopsis lyrata subsp.
lyrata] gi|297319538|gb|EFH49960.1| hypothetical protein
ARALYDRAFT_488346 [Arabidopsis lyrata subsp. lyrata]
Length = 1372
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/72 (59%), Positives = 47/72 (65%), Gaps = 14/72 (19%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQNTG--------VGSGG---QKLTTDDALQ 190
MKR+ DD YA KRP G+SRGESYGQ G +G GG QKLTTDDAL
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYGQSPIPGNGGTGGGSIGDGGINTQKLTTDDALT 60
Query: 191 YLKEVKEMFQNQ 226
YLKEVKEMFQ+Q
Sbjct: 61 YLKEVKEMFQDQ 72
>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
vinifera]
Length = 1395
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 14/72 (19%)
Frame = +2
Query: 53 MKRLPDDNY--APVKRPFGTSRGESYGQIQNTGVGSGG------------QKLTTDDALQ 190
MKRL DD Y + KRP+G+SRG+SYGQ Q G G GG KLTT DAL
Sbjct: 1 MKRLRDDGYVGSQFKRPYGSSRGDSYGQPQIPGGGGGGGGGGGGGGGGSMPKLTTTDALT 60
Query: 191 YLKEVKEMFQNQ 226
YLKEVKEMFQ+Q
Sbjct: 61 YLKEVKEMFQDQ 72
>emb|CBI35015.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 14/72 (19%)
Frame = +2
Query: 53 MKRLPDDNY--APVKRPFGTSRGESYGQIQNTGVGSGG------------QKLTTDDALQ 190
MKRL DD Y + KRP+G+SRG+SYGQ Q G G GG KLTT DAL
Sbjct: 1 MKRLRDDGYVGSQFKRPYGSSRGDSYGQPQIPGGGGGGGGGGGGGGGGSMPKLTTTDALT 60
Query: 191 YLKEVKEMFQNQ 226
YLKEVKEMFQ+Q
Sbjct: 61 YLKEVKEMFQDQ 72
>ref|XP_006290069.1| hypothetical protein CARUB_v10003707mg [Capsella rubella]
gi|482558775|gb|EOA22967.1| hypothetical protein
CARUB_v10003707mg [Capsella rubella]
Length = 1313
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/72 (59%), Positives = 46/72 (63%), Gaps = 14/72 (19%)
Frame = +2
Query: 53 MKRLPDDNYAP---VKRPFGTSRGESYGQIQ---NTGVGSG--------GQKLTTDDALQ 190
MKR+ DD YA KRP G+SRGESYGQ N G G G QKLTTDDAL
Sbjct: 1 MKRIRDDIYATGSQFKRPLGSSRGESYGQPPIPGNGGTGGGIIDDGEINAQKLTTDDALT 60
Query: 191 YLKEVKEMFQNQ 226
YLKEVKEMFQ+Q
Sbjct: 61 YLKEVKEMFQDQ 72
>ref|XP_006357135.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X4 [Solanum tuberosum]
Length = 1351
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 21/79 (26%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG-------------------QKL 169
MKRL +D YA KRPFG+S+GESY Q Q G G+GG QKL
Sbjct: 1 MKRLREDGYANPQFKRPFGSSKGESYSQSQLPGSGAGGGGSGGGGTGGGGTGASASTQKL 60
Query: 170 TTDDALQYLKEVKEMFQNQ 226
TT+DAL YLKEVK+MFQ+Q
Sbjct: 61 TTNDALSYLKEVKDMFQDQ 79
>ref|XP_006357134.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X3 [Solanum tuberosum]
Length = 1355
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 21/79 (26%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG-------------------QKL 169
MKRL +D YA KRPFG+S+GESY Q Q G G+GG QKL
Sbjct: 1 MKRLREDGYANPQFKRPFGSSKGESYSQSQLPGSGAGGGGSGGGGTGGGGTGASASTQKL 60
Query: 170 TTDDALQYLKEVKEMFQNQ 226
TT+DAL YLKEVK+MFQ+Q
Sbjct: 61 TTNDALSYLKEVKDMFQDQ 79
>ref|XP_006357133.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X2 [Solanum tuberosum]
Length = 1357
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 21/79 (26%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG-------------------QKL 169
MKRL +D YA KRPFG+S+GESY Q Q G G+GG QKL
Sbjct: 1 MKRLREDGYANPQFKRPFGSSKGESYSQSQLPGSGAGGGGSGGGGTGGGGTGASASTQKL 60
Query: 170 TTDDALQYLKEVKEMFQNQ 226
TT+DAL YLKEVK+MFQ+Q
Sbjct: 61 TTNDALSYLKEVKDMFQDQ 79
>ref|XP_006357132.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X1 [Solanum tuberosum]
Length = 1361
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/79 (51%), Positives = 48/79 (60%), Gaps = 21/79 (26%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG-------------------QKL 169
MKRL +D YA KRPFG+S+GESY Q Q G G+GG QKL
Sbjct: 1 MKRLREDGYANPQFKRPFGSSKGESYSQSQLPGSGAGGGGSGGGGTGGGGTGASASTQKL 60
Query: 170 TTDDALQYLKEVKEMFQNQ 226
TT+DAL YLKEVK+MFQ+Q
Sbjct: 61 TTNDALSYLKEVKDMFQDQ 79
>gb|EOY03233.1| SIN3-like 2, putative isoform 2 [Theobroma cacao]
Length = 1391
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/78 (53%), Positives = 47/78 (60%), Gaps = 20/78 (25%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG------------------QKLT 172
MKR+ DD Y+ KRPFG+SR ESYGQ Q G G GG QKLT
Sbjct: 1 MKRIRDDIYSGSQFKRPFGSSRAESYGQNQMPGGGGGGGGGGGGIGGVGVGVGSTSQKLT 60
Query: 173 TDDALQYLKEVKEMFQNQ 226
T+DAL YLKEVKEMFQ+Q
Sbjct: 61 TNDALTYLKEVKEMFQDQ 78
>gb|EOY03232.1| SIN3-like 2, putative isoform 1 [Theobroma cacao]
Length = 1384
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/78 (53%), Positives = 47/78 (60%), Gaps = 20/78 (25%)
Frame = +2
Query: 53 MKRLPDDNYA--PVKRPFGTSRGESYGQIQNTGVGSGG------------------QKLT 172
MKR+ DD Y+ KRPFG+SR ESYGQ Q G G GG QKLT
Sbjct: 1 MKRIRDDIYSGSQFKRPFGSSRAESYGQNQMPGGGGGGGGGGGGIGGVGVGVGSTSQKLT 60
Query: 173 TDDALQYLKEVKEMFQNQ 226
T+DAL YLKEVKEMFQ+Q
Sbjct: 61 TNDALTYLKEVKEMFQDQ 78
>ref|XP_006369904.1| hypothetical protein POPTR_0001s34800g [Populus trichocarpa]
gi|550348885|gb|ERP66473.1| hypothetical protein
POPTR_0001s34800g [Populus trichocarpa]
Length = 1352
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 15/73 (20%)
Frame = +2
Query: 53 MKRLPDDNY-------APV---KRPFGTSRGESYGQIQNTGVGSGG-----QKLTTDDAL 187
MKR+ DD + AP KRP ++RGESYGQ Q G G GG QKLTT DAL
Sbjct: 1 MKRMRDDIFSAPAPAPAPAPEFKRPLTSTRGESYGQTQIPGGGGGGGSGNSQKLTTTDAL 60
Query: 188 QYLKEVKEMFQNQ 226
QYLKEVK+MFQ+Q
Sbjct: 61 QYLKEVKDMFQDQ 73
>ref|XP_002300028.1| hypothetical protein POPTRDRAFT_797843 [Populus trichocarpa]
Length = 1273
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 15/73 (20%)
Frame = +2
Query: 53 MKRLPDDNY-------APV---KRPFGTSRGESYGQIQNTGVGSGG-----QKLTTDDAL 187
MKR+ DD + AP KRP ++RGESYGQ Q G G GG QKLTT DAL
Sbjct: 1 MKRMRDDIFSAPAPAPAPAPEFKRPLTSTRGESYGQTQIPGGGGGGGSGNSQKLTTTDAL 60
Query: 188 QYLKEVKEMFQNQ 226
QYLKEVK+MFQ+Q
Sbjct: 61 QYLKEVKDMFQDQ 73
>ref|XP_006593647.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X4 [Glycine max]
Length = 1372
Score = 65.9 bits (159), Expect = 6e-09
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 17/75 (22%)
Frame = +2
Query: 53 MKRLPDDNY--APVKRPFGTSRGESYGQIQNTGVGSGG---------------QKLTTDD 181
MKR DD Y + KRPF +SR +SYGQ Q G G GG QKLTT+D
Sbjct: 1 MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND 60
Query: 182 ALQYLKEVKEMFQNQ 226
AL YLKEVK+MFQ+Q
Sbjct: 61 ALSYLKEVKDMFQDQ 75
>ref|XP_006593646.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X3 [Glycine max]
Length = 1373
Score = 65.9 bits (159), Expect = 6e-09
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 17/75 (22%)
Frame = +2
Query: 53 MKRLPDDNY--APVKRPFGTSRGESYGQIQNTGVGSGG---------------QKLTTDD 181
MKR DD Y + KRPF +SR +SYGQ Q G G GG QKLTT+D
Sbjct: 1 MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND 60
Query: 182 ALQYLKEVKEMFQNQ 226
AL YLKEVK+MFQ+Q
Sbjct: 61 ALSYLKEVKDMFQDQ 75
>ref|XP_006593645.1| PREDICTED: paired amphipathic helix protein Sin3-like 2-like
isoform X2 [Glycine max]
Length = 1374
Score = 65.9 bits (159), Expect = 6e-09
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 17/75 (22%)
Frame = +2
Query: 53 MKRLPDDNY--APVKRPFGTSRGESYGQIQNTGVGSGG---------------QKLTTDD 181
MKR DD Y + KRPF +SR +SYGQ Q G G GG QKLTT+D
Sbjct: 1 MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND 60
Query: 182 ALQYLKEVKEMFQNQ 226
AL YLKEVK+MFQ+Q
Sbjct: 61 ALSYLKEVKDMFQDQ 75