BLASTX nr result
ID: Rheum21_contig00031273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031273
(238 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 1e-10
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 63 4e-08
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 6e-08
gb|EPS71500.1| hypothetical protein M569_03255 [Genlisea aurea] 61 2e-07
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [... 61 2e-07
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 60 2e-07
ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein A... 59 7e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 59 9e-07
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 59 9e-07
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 58 1e-06
gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus pe... 58 1e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 58 1e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 58 1e-06
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 58 1e-06
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 57 2e-06
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 57 3e-06
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 3e-06
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 3e-06
ref|XP_002461982.1| hypothetical protein SORBIDRAFT_02g011546 [S... 57 3e-06
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea] 56 4e-06
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADDT+IFA A+ + I+++L K+ +SG +NYHKS FQ SPN+ K AS+L
Sbjct: 697 FADDTMIFAKATEASCHKIRQILDKYCLMSGQLVNYHKSAFQCSPNVRDIDKVNFASILG 756
Query: 183 LQVTNSMEKYLGIPIV 230
+Q ++ + YLG PI+
Sbjct: 757 MQESSELGDYLGCPII 772
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD LIFA A+ I + L F+ SG IN+HKS+ SPN+ +K + ++L
Sbjct: 112 FADDCLIFAKATPRGARNILKTLSDFATASGQKINFHKSSLYFSPNVCGSRKNDIVNILG 171
Query: 183 LQVTNSMEKYLGI 221
+Q +++EKYLGI
Sbjct: 172 IQQKSTIEKYLGI 184
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+L+F A+ L I +L K+ SG INY KS S + KK++L +LL+
Sbjct: 688 FADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLH 747
Query: 183 LQVTNSMEKYLGIPIVC 233
++ + +KYLGIP +C
Sbjct: 748 MRQVDRHQKYLGIPALC 764
>gb|EPS71500.1| hypothetical protein M569_03255 [Genlisea aurea]
Length = 693
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADDTL+F + + I+ +L K++ SG IN KS S + +Q LA
Sbjct: 75 FADDTLLFCKSHVAALRKIQNLLAKYASASGQQINLSKSVLTISKGYDEHHRQLLAEAAG 134
Query: 183 LQVTNSMEKYLGIPIVC 233
+ +T+ +EKYLG+P VC
Sbjct: 135 IPITSRLEKYLGLPSVC 151
>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
Length = 1060
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+++F A+ + + ++ + Q + E++G INY KS SPN R + +LN
Sbjct: 384 FADDSILFMKATNKDCMALETLFQTYEEVTGQQINYSKSALSLSPNATRADFDMIEGVLN 443
Query: 183 LQVTNSMEKYLGIPIV 230
+ V E YLG+P +
Sbjct: 444 VPVVRCHENYLGLPTI 459
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+ IF+ A +ML +K + + +SG INY KS+ S N+ K+ LA++L
Sbjct: 439 FADDSFIFSRAEERDMLCMKDIFVTYETMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLG 498
Query: 183 LQVTNSMEKYLGIP 224
+Q + EKYLG+P
Sbjct: 499 VQRVENHEKYLGLP 512
>ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 322
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+L+F +AS + L +K + + +SG I+ KST SP R K+ ++ L+
Sbjct: 65 FADDSLLFCDASVQDCLKLKEIFAVYERVSGQKISVEKSTVSFSPRTTRVVKEACSTALD 124
Query: 183 LQVTNSMEKYLGIPIV 230
+++ E+YLG+PIV
Sbjct: 125 MKIVPCHERYLGLPIV 140
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD ++F AS + L FS+ SGL +N+ KS S N+ G K+ + S+L
Sbjct: 1217 FADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQ 1276
Query: 183 LQVTNSMEKYLGIPIV 230
+ V S+ YLGIP++
Sbjct: 1277 VPVAESLGTYLGIPML 1292
>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD L+F A ++ + +I + +FS SGL IN KS S GK L ++
Sbjct: 683 FADDVLLFTKAKSSQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISG 742
Query: 183 LQVTNSMEKYLGIPIV 230
+Q T ++ KYLG P++
Sbjct: 743 IQSTTTLGKYLGFPML 758
>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
Length = 1570
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+L+F AS T+ +K++ +S SG N+ KS+ S NI G+ ++ +
Sbjct: 616 FADDSLVFTRASDTDCQNLKKIFDCYSAASGQLFNFEKSSMFLSGNIPTGQASKIKEIFQ 675
Query: 183 LQVTNSMEKYLGIP 224
L + + EKYLG+P
Sbjct: 676 LNIVSRHEKYLGLP 689
>gb|EMJ13999.1| hypothetical protein PRUPE_ppa020180mg [Prunus persica]
Length = 1072
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+++F A+ + ++ + Q + E++G INY KS SPN R + LN
Sbjct: 634 FADDSILFMKATNKACMALETLFQTYEEVTGQQINYSKSALSLSPNATRADFDMIEGGLN 693
Query: 183 LQVTNSMEKYLGIPIV 230
+ V E YLG+P +
Sbjct: 694 VPVVRCHENYLGLPTI 709
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD ++F AS + L FS SGL +N+ KS S N+ G K+ + S+L
Sbjct: 685 FADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQ 744
Query: 183 LQVTNSMEKYLGIPIV 230
+ V S+ YLGIP++
Sbjct: 745 VPVAESLGTYLGIPML 760
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD ++F AS + L FS SGL +N+ KS S N+ G K+ + S+L
Sbjct: 685 FADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQ 744
Query: 183 LQVTNSMEKYLGIPIV 230
+ V S+ YLGIP++
Sbjct: 745 VPVAESLGTYLGIPML 760
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD ++FA AS + I+R+L++F E SG ++ KS S N+ R +Q ++
Sbjct: 544 FADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESG 603
Query: 183 LQVTNSMEKYLGIPIV 230
+ T + KYLG+PI+
Sbjct: 604 IGCTKELGKYLGMPIL 619
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+ IF A +K +LQ + E G +++ KS+ S N+ R + +LASLL
Sbjct: 641 FADDSFIFLRAEVVEWYRLKHILQVYEEALGQQVHFQKSSISFSRNVAREAQDRLASLLG 700
Query: 183 LQVTNSMEKYLGIP 224
++ + +KYLG+P
Sbjct: 701 VERVDKHDKYLGLP 714
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD ++FA AST ++ L+KF +SG ++N+ KS SPN Q L+ +
Sbjct: 56 FADDLVLFAEASTKQAQIMRDCLEKFCSVSGQAVNFDKSAIFCSPNTGNVLAQDLSRICG 115
Query: 183 LQVTNSMEKYLGIPIV 230
+T ++ YLG+PI+
Sbjct: 116 SPLTANLGNYLGMPIL 131
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+L+F A+ I +L ++ SG INY KS S + +K +L ++LN
Sbjct: 685 FADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILN 744
Query: 183 LQVTNSMEKYLGIPIV 230
++ + EKYLGIP +
Sbjct: 745 MRQVDRHEKYLGIPSI 760
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/78 (41%), Positives = 44/78 (56%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADD+LIF A+ T +K +L +FS +SG INY+KS SPN K+ + S++
Sbjct: 694 FADDSLIFFKATPTACAGVKDILARFSRLSGEVINYNKSHIMFSPNTPLKFKRYMRSIVG 753
Query: 183 LQVTNSMEKYLGIPIVCD 236
S+ KYLG I D
Sbjct: 754 TPSEESLGKYLGCNIEVD 771
>ref|XP_002461982.1| hypothetical protein SORBIDRAFT_02g011546 [Sorghum bicolor]
gi|241925359|gb|EER98503.1| hypothetical protein
SORBIDRAFT_02g011546 [Sorghum bicolor]
Length = 761
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
+ADDT+I + + ++ +K +L F +SGL INYHKS + +G+K+ LA++LN
Sbjct: 657 YADDTVIMVDTTVQSIRNLKLILYCFEWLSGLKINYHKSEIFVF-GVTQGEKENLANMLN 715
Query: 183 LQVTNSMEKYLGIPI 227
+ + KYLGIPI
Sbjct: 716 CVLGDFPMKYLGIPI 730
>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
Length = 1469
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +3
Query: 3 FADDTLIFANASTTNMLYIKRMLQKFSEISGLSINYHKSTFQTSPNIERGKKQQLASLLN 182
FADDTLIF+ A+ T M I+ +L +++ ISG IN KS + +Q L++ +
Sbjct: 1057 FADDTLIFSAATLTAMEGIRSVLTRYAAISGQLINLEKSALSVPSEADPHYRQLLSTAVG 1116
Query: 183 LQVTNSMEKYLGIP 224
+ +T+S+ KYLG+P
Sbjct: 1117 VPLTDSLGKYLGLP 1130