BLASTX nr result
ID: Rheum21_contig00031268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031268
(261 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 138 9e-31
ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 138 9e-31
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 134 1e-29
emb|CBI19841.3| unnamed protein product [Vitis vinifera] 134 1e-29
emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera] 134 1e-29
ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 134 2e-29
ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 134 2e-29
ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 134 2e-29
ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc... 133 3e-29
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc... 133 3e-29
dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japon... 132 6e-29
tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea m... 132 6e-29
ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [S... 132 6e-29
gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japo... 132 6e-29
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi... 132 6e-29
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g... 132 6e-29
ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 131 1e-28
ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 131 1e-28
ref|XP_006836126.1| hypothetical protein AMTR_s00491p00000370, p... 130 2e-28
gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis] 129 4e-28
>ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
Length = 1099
Score = 138 bits (347), Expect = 9e-31
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
I DFYP+DFE+DMNGKR++WQGI KLPFIDE RLLAEVAK+EHTLT +EARRN +M+D L
Sbjct: 677 ISDFYPSDFEVDMNGKRFSWQGIAKLPFIDEARLLAEVAKVEHTLTEEEARRNCVMNDML 736
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F++LSHPLS +IFSL+DR KQL + ER
Sbjct: 737 FVSLSHPLSPYIFSLDDRCKQLTDNER 763
>ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
Length = 1109
Score = 138 bits (347), Expect = 9e-31
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
I DFYP+DFE+DMNGKR++WQGI KLPFIDE RLLAEVAK+EHTLT +EARRN +M+D L
Sbjct: 686 ISDFYPSDFEVDMNGKRFSWQGIAKLPFIDEARLLAEVAKVEHTLTEEEARRNCVMNDML 745
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F++LSHPLS +IFSL+DR KQL + ER
Sbjct: 746 FVSLSHPLSPYIFSLDDRCKQLTDDER 772
>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 134 bits (338), Expect = 1e-29
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKR+AWQGI KLPFIDE RLLAEV KIEHTLT +E RRN +M D L
Sbjct: 654 IIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDML 713
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ LSHPLS +IFSL+DR K+L + ER
Sbjct: 714 FVALSHPLSPYIFSLDDRCKKLTDNER 740
>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 134 bits (338), Expect = 1e-29
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKR+AWQGI KLPFIDE RLLAEV KIEHTLT +E RRN +M D L
Sbjct: 654 IIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDML 713
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ LSHPLS +IFSL+DR K+L + ER
Sbjct: 714 FVALSHPLSPYIFSLDDRCKKLTDNER 740
>emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 134 bits (338), Expect = 1e-29
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKR+AWQGI KLPFIDE RLLAEV KIEHTLT +E RRN +M D L
Sbjct: 89 IIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEFRRNSVMFDML 148
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ LSHPLS +IFSL+DR K+L + ER
Sbjct: 149 FVALSHPLSPYIFSLDDRCKKLTDNER 175
>ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Setaria
italica]
Length = 866
Score = 134 bits (336), Expect = 2e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M D L
Sbjct: 445 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSVMFDML 504
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 505 FVNGSHPLSPYIYSLNSKFGHLPDKER 531
>ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria
italica]
Length = 994
Score = 134 bits (336), Expect = 2e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M D L
Sbjct: 573 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSVMFDML 632
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 633 FVNGSHPLSPYIYSLNSKFGHLPDKER 659
>ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria
italica]
Length = 1074
Score = 134 bits (336), Expect = 2e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M D L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSVMFDML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDKER 739
>ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 133 bits (334), Expect = 3e-29
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAEVAK+EHTLT +EARRN +M D L
Sbjct: 158 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRNSIMFDML 217
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ SHPLS I+SL++R KQL E +R
Sbjct: 218 FVTSSHPLSVSIYSLDNRCKQLAERDR 244
>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 133 bits (334), Expect = 3e-29
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAEVAK+EHTLT +EARRN +M D L
Sbjct: 669 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEARRNSIMFDML 728
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ SHPLS I+SL++R KQL E +R
Sbjct: 729 FVTSSHPLSVSIYSLDNRCKQLAERDR 755
>dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDRER 739
>tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M D L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNSIMCDML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ R
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDKRR 739
>ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein
SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M D L
Sbjct: 653 IIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFDML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ +R
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDKKR 739
>gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 627 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 686
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 687 FVNGSHPLSPYIYSLNSKFGHLPDRER 713
>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDRER 739
>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3'
exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 132 bits (331), Expect = 6e-29
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP+ ER
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPDRER 739
>ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Oryza
brachyantha]
Length = 858
Score = 131 bits (329), Expect = 1e-28
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 445 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 504
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP ER
Sbjct: 505 FVNGSHPLSPYIYSLNSKFGHLPNKER 531
>ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Oryza
brachyantha]
Length = 1066
Score = 131 bits (329), Expect = 1e-28
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLAE+ K+EHTLT +EARRN +M + L
Sbjct: 653 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEARRNSIMFNML 712
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+N SHPLS +I+SLN + LP ER
Sbjct: 713 FVNGSHPLSPYIYSLNSKFGHLPNKER 739
>ref|XP_006836126.1| hypothetical protein AMTR_s00491p00000370, partial [Amborella
trichopoda] gi|548838589|gb|ERM98979.1| hypothetical
protein AMTR_s00491p00000370, partial [Amborella
trichopoda]
Length = 699
Score = 130 bits (327), Expect = 2e-28
Identities = 59/87 (67%), Positives = 71/87 (81%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKR+AWQG+ KLPFIDEGRLLAE++K+EHTLT +E RRN +M D L
Sbjct: 566 IIDFYPTDFEVDMNGKRFAWQGVAKLPFIDEGRLLAEISKVEHTLTDEEVRRNSVMYDML 625
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
++ +SHPLS +IFSL DR L ER
Sbjct: 626 YVTVSHPLSPYIFSLYDRFSHLSGKER 652
>gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis]
Length = 1082
Score = 129 bits (324), Expect = 4e-28
Identities = 62/87 (71%), Positives = 71/87 (81%)
Frame = +1
Query: 1 IIDFYPADFEIDMNGKRYAWQGIPKLPFIDEGRLLAEVAKIEHTLTADEARRNKMMSDRL 180
IIDFYP DFE+DMNGKRY+WQGI KLPFIDE RLLA VA+ EHTLTA+E RRN +M D L
Sbjct: 646 IIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEPRLLAVVAETEHTLTAEEVRRNSIMCDML 705
Query: 181 FINLSHPLSSFIFSLNDRSKQLPEAER 261
F+ SHPLS I+SL+DR KQL +ER
Sbjct: 706 FVASSHPLSVSIYSLDDRCKQLSNSER 732