BLASTX nr result

ID: Rheum21_contig00031220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00031220
         (207 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI17229.1| hypothetical protein [uncultured alpha proteobact...    78   1e-12
emb|CBS90411.1| protein of unknown function [Azospirillum lipofe...    52   5e-07

>gb|ADI17229.1| hypothetical protein [uncultured alpha proteobacterium
           HF0070_14E07]
          Length = 139

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/69 (60%), Positives = 43/69 (62%)
 Frame = +1

Query: 1   QHSHFRYLQRPSRVPLHRLTERSATAHLRAPEASARGLSPVTSSAQKPLFRPVSCYAFFK 180
           QHSHFRYLQ PS+     L             AS  GLSP TSSAQ  L RPVS YAFFK
Sbjct: 60  QHSHFRYLQHPSQDTFTGLRNAPLPCVKDTSSASVYGLSPDTSSAQAGLSRPVSYYAFFK 119

Query: 181 GWLLLSQPP 207
           GWLLLSQPP
Sbjct: 120 GWLLLSQPP 128


>emb|CBS90411.1| protein of unknown function [Azospirillum lipoferum 4B]
          Length = 61

 Score = 51.6 bits (122), Expect(2) = 5e-07
 Identities = 27/37 (72%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
 Frame = +3

Query: 39  GPPSQAYGTLRYRALAC-TRSFGSWLEPRYIFGAETL 146
           G PSQAYGTLRYR +   TRSFG+ LEPRYIFGA  L
Sbjct: 24  GHPSQAYGTLRYRVIEDHTRSFGTRLEPRYIFGAGRL 60



 Score = 27.7 bits (60), Expect(2) = 5e-07
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +2

Query: 2  SIRTSDTSRGPHGSP 46
          SI TSDTSR PHG P
Sbjct: 12 SILTSDTSRRPHGHP 26


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