BLASTX nr result
ID: Rheum21_contig00031149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00031149
(311 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 120 2e-25
ref|XP_002300148.1| DNA repair-recombination family protein [Pop... 120 2e-25
gb|EXB73671.1| hypothetical protein L484_026832 [Morus notabilis] 118 9e-25
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa... 117 2e-24
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu... 117 2e-24
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ... 110 2e-22
gb|EMT22900.1| DNA repair protein RAD50 [Aegilops tauschii] 109 3e-22
gb|EMT01894.1| DNA repair protein RAD50 [Aegilops tauschii] 109 4e-22
gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum] 109 4e-22
gb|ABV90885.1| DNA repair protein Rad50 [Triticum turgidum] 109 4e-22
gb|ABV90884.1| DNA repair protein Rad50 [Aegilops tauschii] 109 4e-22
gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum] 109 4e-22
gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum] 109 4e-22
gb|ABV90880.1| DNA repair protein Rad50 [Aegilops tauschii] 109 4e-22
gb|ABV90879.1| DNA repair protein Rad50 [Triticum monococcum] 109 4e-22
ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 108 6e-22
ref|XP_003574988.1| PREDICTED: DNA repair protein RAD50-like [Br... 108 1e-21
gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum] 108 1e-21
ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]... 107 2e-21
dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis t... 107 2e-21
>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Vitis vinifera]
Length = 1316
Score = 120 bits (300), Expect = 2e-25
Identities = 62/96 (64%), Positives = 70/96 (72%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL EWKTKF+ERIALL S I KLER+ DTET+ + DY EISKLQTEA
Sbjct: 299 EDTDEELNEWKTKFEERIALLESKISKLEREMDDTETKGSFLKQTINDYIWEISKLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
E + S K ERDSTIQKLF ++NLG L PFSNE+A
Sbjct: 359 EVHSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIA 394
>ref|XP_002300148.1| DNA repair-recombination family protein [Populus trichocarpa]
gi|222847406|gb|EEE84953.1| DNA repair-recombination
family protein [Populus trichocarpa]
Length = 1316
Score = 120 bits (300), Expect = 2e-25
Identities = 59/96 (61%), Positives = 74/96 (77%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EWKTKFDE+IA L SNI KLER+ D ET+ + +Y +EIS+LQTEA
Sbjct: 299 EDTDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEYIREISRLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
EA+ S K ERDS IQK++ +HNLGPL +APFS++VA
Sbjct: 359 EAHASLKNERDSNIQKMYTRHNLGPLPNAPFSDDVA 394
>gb|EXB73671.1| hypothetical protein L484_026832 [Morus notabilis]
Length = 691
Score = 118 bits (295), Expect = 9e-25
Identities = 60/96 (62%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL EWKTKF+ERI LL I KLER+ D ET+S + + +KD ++ISKLQTE
Sbjct: 299 EDTDEELDEWKTKFEERILLLEVKIKKLEREMNDIETKSSSLNQSIKDSIRDISKLQTEV 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
EAY S K ERDSTI+ LF +HNLGP + PFSNEVA
Sbjct: 359 EAYMSLKNERDSTIKNLFTRHNLGPFPNPPFSNEVA 394
>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 1088
Score = 117 bits (292), Expect = 2e-24
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EWKTKF+ERIA+L S + KLER+ D ET+S + +Y EISKLQTEA
Sbjct: 71 EDTDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIWEISKLQTEA 130
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVAS 20
E + S K ERDSTI++LF +HNLG + + PFS+EVAS
Sbjct: 131 EVHMSLKNERDSTIEELFARHNLGSVPNTPFSDEVAS 167
>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
Length = 1316
Score = 117 bits (292), Expect = 2e-24
Identities = 58/97 (59%), Positives = 73/97 (75%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EWKTKF+ERIA+L S + KLER+ D ET+S + +Y EISKLQTEA
Sbjct: 299 EDTDEELKEWKTKFEERIAILESKVSKLEREMNDLETKSSFLKQAINEYIWEISKLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVAS 20
E + S K ERDSTI++LF +HNLG + + PFS+EVAS
Sbjct: 359 EVHMSLKNERDSTIEELFARHNLGSVPNTPFSDEVAS 395
>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
putative [Ricinus communis]
Length = 1256
Score = 110 bits (275), Expect = 2e-22
Identities = 53/96 (55%), Positives = 72/96 (75%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
ED E+L EWKTKFDE++A + S+I KL+R+K DTE ++ + + +Y +EIS+LQTEA
Sbjct: 299 EDPDEDLMEWKTKFDEKVAQMESSISKLKREKNDTEIKTSFLKENITEYIREISRLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
EA+ S K ERDSTIQKL +HNLG L AP S+++A
Sbjct: 359 EAHNSLKNERDSTIQKLCARHNLGSLPQAPLSDDIA 394
>gb|EMT22900.1| DNA repair protein RAD50 [Aegilops tauschii]
Length = 1328
Score = 109 bits (273), Expect = 3e-22
Identities = 52/97 (53%), Positives = 73/97 (75%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT +ELREW+T F+E+IA+L + IGKLER+ D T+ S+ + D T++I KLQ EA
Sbjct: 324 EDTDKELREWQTTFEEKIAILDTKIGKLEREMNDEYTKISLLSETINDSTRQIGKLQAEA 383
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVAS 20
+A+ S K ERDS I+K+F KHNLGP+ APF+N++A+
Sbjct: 384 DAHVSVKHERDSAIRKIFNKHNLGPIPDAPFTNDIAA 420
>gb|EMT01894.1| DNA repair protein RAD50 [Aegilops tauschii]
Length = 988
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 312 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 371
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 372 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 407
>gb|ABV90886.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90885.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90884.1| DNA repair protein Rad50 [Aegilops tauschii]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90882.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90881.1| DNA repair protein Rad50 [Triticum turgidum]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90880.1| DNA repair protein Rad50 [Aegilops tauschii]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>gb|ABV90879.1| DNA repair protein Rad50 [Triticum monococcum]
Length = 1316
Score = 109 bits (272), Expect = 4e-22
Identities = 53/96 (55%), Positives = 71/96 (73%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER+ D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Fragaria vesca subsp. vesca]
Length = 1316
Score = 108 bits (271), Expect = 6e-22
Identities = 55/95 (57%), Positives = 68/95 (71%)
Frame = -2
Query: 307 DTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEAE 128
DT EEL+EWKTKFD+RI LG+ I KLER++ DT+T+S +KD ++SKLQ EA
Sbjct: 300 DTDEELKEWKTKFDDRIRDLGTQIFKLEREQDDTKTKSNFLGQTIKDSIWDVSKLQNEAN 359
Query: 127 AYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
AY K +RDSTIQ LF +HNLG L PF+NEVA
Sbjct: 360 AYLDLKKQRDSTIQNLFARHNLGSLPDPPFNNEVA 394
>ref|XP_003574988.1| PREDICTED: DNA repair protein RAD50-like [Brachypodium distachyon]
Length = 1316
Score = 108 bits (269), Expect = 1e-21
Identities = 54/96 (56%), Positives = 67/96 (69%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL EW+TKF+ERIAL G+ I KLER D + +S S + D T I KLQ EA
Sbjct: 299 EDTDEELEEWRTKFEERIALQGTKISKLERDMNDEKAKSSLLSKTINDSTLHIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+K+F KHNLGP+ PF+N+VA
Sbjct: 359 DAHISMKHERDSAIRKIFTKHNLGPIPDPPFTNDVA 394
>gb|ABV90883.1| DNA repair protein Rad50 [Triticum monococcum]
Length = 1316
Score = 108 bits (269), Expect = 1e-21
Identities = 53/96 (55%), Positives = 70/96 (72%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT EEL+EW+TKF+E+IALL + I KLER D +S S+ + D T+EI KLQ EA
Sbjct: 299 EDTDEELKEWQTKFEEKIALLETKIAKLERGMNDEYAKSSLLSETINDSTREIGKLQAEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEVA 23
+A+ S K ERDS I+ +F KHNLGP+ APF+N++A
Sbjct: 359 DAHMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIA 394
>ref|NP_565733.1| DNA repair protein RAD50 [Arabidopsis thaliana]
gi|57013013|sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA
repair protein RAD50; Short=AtRAD50
gi|7110148|gb|AAF36810.1|AF168748_1 DNA
repair-recombination protein [Arabidopsis thaliana]
gi|20197622|gb|AAD15407.2| putative RAD50 DNA repair
protein [Arabidopsis thaliana]
gi|22654997|gb|AAM98090.1| At2g31970/F22D22.28
[Arabidopsis thaliana] gi|29028758|gb|AAO64758.1|
At2g31970/F22D22.28 [Arabidopsis thaliana]
gi|330253520|gb|AEC08614.1| DNA repair protein RAD50
[Arabidopsis thaliana]
Length = 1316
Score = 107 bits (267), Expect = 2e-21
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT+EEL+EWK+KF+ER+ALLG+ I K+ER+ DTET + + +Y EISKLQTEA
Sbjct: 299 EDTIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNYMLEISKLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEV 26
EA+ K ERDSTIQ +F +NLG + PFS EV
Sbjct: 359 EAHMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEV 393
>dbj|BAD94628.1| putative RAD50 DNA repair protein [Arabidopsis thaliana]
Length = 554
Score = 107 bits (267), Expect = 2e-21
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = -2
Query: 310 EDTVEELREWKTKFDERIALLGSNIGKLERKKTDTETESRAHSDKVKDYTKEISKLQTEA 131
EDT+EEL+EWK+KF+ER+ALLG+ I K+ER+ DTET + + +Y EISKLQTEA
Sbjct: 299 EDTIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNYMLEISKLQTEA 358
Query: 130 EAYKSCKIERDSTIQKLFVKHNLGPLSHAPFSNEV 26
EA+ K ERDSTIQ +F +NLG + PFS EV
Sbjct: 359 EAHMLLKNERDSTIQNIFFHYNLGNVPSTPFSTEV 393