BLASTX nr result
ID: Rheum21_contig00030348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030348
(307 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subc... 74 2e-11
emb|CAJ65807.1| polyprotein [Citrus sinensis] 69 5e-11
gb|EOX99708.1| CCHC-type integrase-like protein [Theobroma cacao] 61 8e-11
ref|XP_004515382.1| PREDICTED: uncharacterized protein LOC101499... 72 1e-10
gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-... 72 1e-10
ref|XP_004516474.1| PREDICTED: uncharacterized protein LOC101505... 71 1e-10
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 71 1e-10
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc... 71 1e-10
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 71 1e-10
gb|AAX92979.1| retrotransposon protein, putative, Ty3-gypsy sub-... 71 1e-10
gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Ja... 71 1e-10
emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group] 71 1e-10
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 71 1e-10
emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indi... 71 1e-10
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 71 1e-10
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group... 71 1e-10
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 71 2e-10
emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group] 71 2e-10
gb|ABC94893.1| polyprotein [Oryza australiensis] 71 2e-10
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 71 2e-10
>gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1620
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 944 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 1002
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K +EFV ++ K SF+++
Sbjct: 1003 MTQLLKKEKEFVWSEQCKESFEQL 1026
>emb|CAJ65807.1| polyprotein [Citrus sinensis]
Length = 533
Score = 69.3 bits (168), Expect(2) = 5e-11
Identities = 31/52 (59%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
+V FLGHVI G+ V+PQ+ ++VV W+RP +V++VRSFLGLAG+YR F+EG
Sbjct: 45 KVVFLGHVISAEGIYVDPQKIEAVVNWERPTNVTEVRSFLGLAGYYRRFVEG 96
Score = 23.5 bits (49), Expect(2) = 5e-11
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 164 KVSPPGTGLSTRSTRNLSRMTRVRSVFRKLDRCLTYAPVLAWSEG 298
K++ P T L TR F++L CLT APVL G
Sbjct: 99 KIAIPLTRL-TRKNAKFQWNDDCEKGFQELKACLTSAPVLTLPSG 142
>gb|EOX99708.1| CCHC-type integrase-like protein [Theobroma cacao]
Length = 524
Score = 61.2 bits (147), Expect(2) = 8e-11
Identities = 26/50 (52%), Positives = 40/50 (80%)
Frame = +1
Query: 4 VAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFME 153
+AFLGHV ++GV V+P++ + V W RP S++++RSFLGLAG+YR F++
Sbjct: 288 IAFLGHVASKDGVQVDPKKVEVVEKWPRPMSITEIRSFLGLAGYYRRFVK 337
Score = 30.8 bits (68), Expect(2) = 8e-11
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 152 KDCYKVSPPGTGLSTRSTRNLSRMTRVRSVFRKLDRCLTYAPVLAWSEG 298
KD K+ P T L+++ T+ + + + F KL CLT APVL+ +G
Sbjct: 337 KDFSKIVAPLTKLTSKDTKFVW-LDACENSFEKLKTCLTTAPVLSLPQG 384
>ref|XP_004515382.1| PREDICTED: uncharacterized protein LOC101499978 [Cicer arietinum]
Length = 1352
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/52 (57%), Positives = 45/52 (86%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EV+FLGH+I + G++V+P + +SV+ WK P+SV+++RSFLGLAG+YR F+EG
Sbjct: 658 EVSFLGHIISKGGIVVDPTKVESVLEWKAPKSVTEIRSFLGLAGYYRRFIEG 709
>gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550032|gb|ABA92829.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 669
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/52 (61%), Positives = 42/52 (80%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EVAFLGHVI GV V+P + +++ WK P+SV+K+RSFLGLAG+YR F+EG
Sbjct: 257 EVAFLGHVISAGGVAVDPAKVEAITEWKAPKSVTKIRSFLGLAGYYRRFIEG 308
>ref|XP_004516474.1| PREDICTED: uncharacterized protein LOC101505435 [Cicer arietinum]
Length = 1113
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EV+FLGHVI GV V+P + +SV+ WK P+SV+++RSFLGLAG+YR F+EG
Sbjct: 605 EVSFLGHVISRGGVAVDPAKVESVLEWKTPKSVTEIRSFLGLAGYYRRFIEG 656
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 586 EVAFLGHVISAGGVAVDPAKVEAVTKWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 644
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 645 MTQLLKKEKKFVWSEQCQESFEQL 668
>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 1078 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 1136
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 1137 MTQLLKKEKKFVWSEQCQESFEQL 1160
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550206|gb|ABA93003.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EVAFLGHVI GV+V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG
Sbjct: 737 EVAFLGHVISAGGVVVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEG 788
>gb|AAX92979.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1074
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EVAFLGHVI +GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG
Sbjct: 725 EVAFLGHVISASGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRTFIEG 776
>gb|AAM01060.1|AC091735_33 Putative retroelement [Oryza sativa Japonica Group]
gi|21672044|gb|AAM74406.1|AC120497_6 Putative
retroelement [Oryza sativa Japonica Group]
gi|31430958|gb|AAP52803.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 986
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/84 (41%), Positives = 59/84 (70%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGH+I GV+V+P + +++ WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 253 EVAFLGHIISAGGVVVDPAKVEAITEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 311
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 312 MTQLLKKEKKFVWSEQCQESFEQL 335
>emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 4 VAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGL 159
VAFLGHVI NGV V+P + ++V+ W P++VS++RSFLGLAG+YR F+EGL
Sbjct: 1088 VAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRFIEGL 1139
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 737 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 795
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 796 MTQLLKKEKKFVWSEQCQESFEQL 819
>emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 4 VAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGL 159
VAFLGHVI NGV V+P + ++V+ W P++VS++RSFLGLAG+YR F+EGL
Sbjct: 1088 VAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRFIEGL 1139
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 737 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 795
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 796 MTQLLKKEKKFVWSEQCQESFEQL 819
>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711716|gb|ABF99511.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1312
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 652 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 710
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 711 MTQLLKKEKKFVWSEQCQESFEQL 734
>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 1100 EVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-KIARP 1158
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 1159 MTQLLKKKKKFVWSEQCQESFEQL 1182
>emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]
Length = 1644
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EVAFLGHVI GV V+P + ++V WK P+SV+++RSFLGLAG+YR F+EG ++
Sbjct: 827 EVAFLGHVISAGGVAVDPTKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFS-MIARP 885
Query: 181 DRSVHKVHQEFV*DDKSKISFQEV 252
+ K ++FV ++ + SF+++
Sbjct: 886 MTQLLKKEKKFVWSEQCQESFEQL 909
>gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEG 156
EVAFLGHV+ GV V+P + ++V+ WK P+SV++VRSFLGLAG+YR F+EG
Sbjct: 736 EVAFLGHVVSAGGVAVDPAKVEAVMEWKAPKSVTEVRSFLGLAGYYRRFIEG 787
>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 1 EVAFLGHVIKENGVLVNPQEGDSVVVWKRPQSVSKVRSFLGLAGHYRWFMEGLL*GLSTW 180
EV+FLGHV+ G+ V+P + V+ WK P VS++RSFLGLAG+YR F+EG L+
Sbjct: 755 EVSFLGHVVSNGGIAVDPSKVKDVLNWKPPTDVSEIRSFLGLAGYYRRFIEGFS-KLAKP 813
Query: 181 DRSVHKVHQEFV*DDKSKISFQE 249
++ + + +FV DK + SF+E
Sbjct: 814 MTALLEKNAKFVWSDKCQASFEE 836