BLASTX nr result
ID: Rheum21_contig00030314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00030314
(306 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vi... 75 7e-12
ref|XP_004304044.1| PREDICTED: reticulon-like protein B11-like i... 74 3e-11
gb|EOX98356.1| Reticulon family protein isoform 2, partial [Theo... 73 3e-11
gb|EOX98355.1| Reticulon family protein isoform 1 [Theobroma cacao] 73 3e-11
gb|EMJ03043.1| hypothetical protein PRUPE_ppa011505mg [Prunus pe... 72 6e-11
ref|XP_002300239.1| hypothetical protein POPTR_0001s30770g [Popu... 72 8e-11
ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis] gi|... 71 1e-10
ref|XP_006406499.1| hypothetical protein EUTSA_v10021554mg [Eutr... 69 8e-10
gb|EXC17290.1| Reticulon-like protein [Morus notabilis] 67 2e-09
ref|XP_002313873.2| hypothetical protein POPTR_0009s09910g [Popu... 67 2e-09
ref|XP_006422934.1| hypothetical protein CICLE_v10029287mg [Citr... 67 3e-09
ref|XP_006298597.1| hypothetical protein CARUB_v10014681mg [Caps... 66 4e-09
ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-li... 65 9e-09
ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [... 65 9e-09
ref|XP_006487007.1| PREDICTED: reticulon-like protein B11-like [... 65 1e-08
ref|XP_004230738.1| PREDICTED: reticulon-like protein B11-like [... 64 2e-08
gb|AFK48785.1| unknown [Medicago truncatula] 63 4e-08
ref|NP_566635.1| reticulon-like protein B11 [Arabidopsis thalian... 63 5e-08
ref|XP_003555964.1| PREDICTED: uncharacterized LOC100527029 [Gly... 63 5e-08
gb|AAM65155.1| unknown [Arabidopsis thaliana] 63 5e-08
>ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vitis vinifera]
gi|296090446|emb|CBI40265.3| unnamed protein product
[Vitis vinifera]
Length = 207
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MGES +P R+S HQA GGGSVAD +LWR W G+ + L+S++SLW LFER Y
Sbjct: 1 MGESDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGY 52
>ref|XP_004304044.1| PREDICTED: reticulon-like protein B11-like isoform 1 [Fragaria
vesca subsp. vesca] gi|470136533|ref|XP_004304045.1|
PREDICTED: reticulon-like protein B11-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 207
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S P R+S HQA GGG+VAD++LWR W +V+VL SST+ W+LFER Y
Sbjct: 1 MGDSMPPHRISVHQALGGGAVADVLLWRQWGATVVVLTSSTAAWILFERAGY 52
>gb|EOX98356.1| Reticulon family protein isoform 2, partial [Theobroma cacao]
Length = 206
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = +1
Query: 28 FQLLPHDIVLNPPDSFH------LSIAMGESRNPGRLSAHQAFGGGSVADIVLWRSWSGS 189
F LP + +P + F + I MG+S RLS HQA GGG VAD++LWR W G
Sbjct: 19 FFSLPISLTPSPSNQFQRERTKKVVIVMGDSNPIPRLSVHQALGGGPVADVLLWRKWCGG 78
Query: 190 VLVLISSTSLWLLFERGEY 246
V++L S+T+LW LFER Y
Sbjct: 79 VVMLASATTLWYLFERAGY 97
>gb|EOX98355.1| Reticulon family protein isoform 1 [Theobroma cacao]
Length = 253
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Frame = +1
Query: 28 FQLLPHDIVLNPPDSFH------LSIAMGESRNPGRLSAHQAFGGGSVADIVLWRSWSGS 189
F LP + +P + F + I MG+S RLS HQA GGG VAD++LWR W G
Sbjct: 20 FFSLPISLTPSPSNQFQRERTKKVVIVMGDSNPIPRLSVHQALGGGPVADVLLWRKWCGG 79
Query: 190 VLVLISSTSLWLLFERGEY 246
V++L S+T+LW LFER Y
Sbjct: 80 VVMLASATTLWYLFERAGY 98
>gb|EMJ03043.1| hypothetical protein PRUPE_ppa011505mg [Prunus persica]
Length = 207
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MGES P R+S HQA GGG VAD++LW+ WSG VL+L S+ S W LFER Y
Sbjct: 1 MGESVPPRRISVHQALGGGHVADVLLWKKWSGGVLLLTSTASSWFLFERAGY 52
>ref|XP_002300239.1| hypothetical protein POPTR_0001s30770g [Populus trichocarpa]
gi|222847497|gb|EEE85044.1| hypothetical protein
POPTR_0001s30770g [Populus trichocarpa]
Length = 207
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MGES P R+S HQA GGG VAD++LW+ W SV VL+S+T+LW+LFE+ Y
Sbjct: 1 MGESVTPRRISVHQALGGGPVADVLLWKRWYASVGVLVSATTLWILFEKAGY 52
>ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis]
gi|223542061|gb|EEF43605.1| Reticulon-3, putative
[Ricinus communis]
Length = 207
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MGES P R+S HQ GGGSVAD++LW+ W SV +++ +TSLW+LFE+ Y
Sbjct: 1 MGESIPPRRISVHQCLGGGSVADVLLWKKWCSSVTIVVGATSLWMLFEQAGY 52
>ref|XP_006406499.1| hypothetical protein EUTSA_v10021554mg [Eutrema salsugineum]
gi|557107645|gb|ESQ47952.1| hypothetical protein
EUTSA_v10021554mg [Eutrema salsugineum]
Length = 199
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S + R+S HQ+ GGGSVAD++LWR+ +G+V++L+SST W LFER Y
Sbjct: 1 MGDSSSSTRVSVHQSLGGGSVADLLLWRNRTGAVILLVSSTGFWFLFERAGY 52
>gb|EXC17290.1| Reticulon-like protein [Morus notabilis]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S R S HQAFG G VAD++LW+ WS V++L+S+T+LW LFER Y
Sbjct: 1 MGDSSPSRRFSVHQAFGDGFVADVLLWKKWSVGVVLLVSATALWFLFERAGY 52
>ref|XP_002313873.2| hypothetical protein POPTR_0009s09910g [Populus trichocarpa]
gi|550331410|gb|EEE87828.2| hypothetical protein
POPTR_0009s09910g [Populus trichocarpa]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S R+S HQA GGG+VAD++LW+ W S+ VL+S+T+LW+LFE+ Y
Sbjct: 1 MGDSVTALRISVHQALGGGTVADVLLWKRWYASIGVLVSATTLWILFEKSGY 52
>ref|XP_006422934.1| hypothetical protein CICLE_v10029287mg [Citrus clementina]
gi|567860562|ref|XP_006422935.1| hypothetical protein
CICLE_v10029287mg [Citrus clementina]
gi|557524868|gb|ESR36174.1| hypothetical protein
CICLE_v10029287mg [Citrus clementina]
gi|557524869|gb|ESR36175.1| hypothetical protein
CICLE_v10029287mg [Citrus clementina]
Length = 207
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S + R+S HQA GGGSVAD++LWR G V++L SST LW LFER Y
Sbjct: 1 MGDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGY 52
>ref|XP_006298597.1| hypothetical protein CARUB_v10014681mg [Capsella rubella]
gi|482567306|gb|EOA31495.1| hypothetical protein
CARUB_v10014681mg [Capsella rubella]
Length = 199
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S + R+S HQ+ GGGSVAD++LWR+ +G+ ++L+SST W LFER Y
Sbjct: 1 MGDSVSSTRVSVHQSLGGGSVADLLLWRNRTGAAILLVSSTGFWFLFERAGY 52
>ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-like protein B11-like
[Cucumis sativus]
Length = 207
Score = 65.1 bits (157), Expect = 9e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 100 SRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
S + R+S HQA GGG VAD++LW+ W G V++L S+T+LW LFER Y
Sbjct: 4 SNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGY 52
>ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [Cucumis sativus]
Length = 207
Score = 65.1 bits (157), Expect = 9e-09
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +1
Query: 100 SRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
S + R+S HQA GGG VAD++LW+ W G V++L S+T+LW LFER Y
Sbjct: 4 SNSSRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGY 52
>ref|XP_006487007.1| PREDICTED: reticulon-like protein B11-like [Citrus sinensis]
Length = 207
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+ + R+S HQA GGGSVAD++LWR G V++L SST LW LFER Y
Sbjct: 1 MGDCHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGY 52
>ref|XP_004230738.1| PREDICTED: reticulon-like protein B11-like [Solanum lycopersicum]
gi|565359108|ref|XP_006346364.1| PREDICTED:
reticulon-like protein B11-like isoform X1 [Solanum
tuberosum] gi|565359110|ref|XP_006346365.1| PREDICTED:
reticulon-like protein B11-like isoform X2 [Solanum
tuberosum]
Length = 204
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG++R H A GGGSVAD++LWR W SV +L+SST+LW+LFER Y
Sbjct: 1 MGDNRQS---FVHHALGGGSVADVLLWRRWCASVTLLVSSTALWILFERAGY 49
>gb|AFK48785.1| unknown [Medicago truncatula]
Length = 204
Score = 63.2 bits (152), Expect = 4e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 109 PGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
P R+S H A G G VAD++LW++W G V +LIS+T+LW LFER Y
Sbjct: 4 PQRISVHHALGSGLVADVLLWKNWRGGVTLLISATTLWYLFERAGY 49
>ref|NP_566635.1| reticulon-like protein B11 [Arabidopsis thaliana]
gi|75274072|sp|Q9LT71.1|RTNLK_ARATH RecName:
Full=Reticulon-like protein B11; Short=AtRTNLB11
gi|11994469|dbj|BAB02471.1| unnamed protein product
[Arabidopsis thaliana] gi|26449615|dbj|BAC41933.1|
unknown protein [Arabidopsis thaliana]
gi|28950723|gb|AAO63285.1| At3g19460 [Arabidopsis
thaliana] gi|332642721|gb|AEE76242.1| reticulon-like
protein B11 [Arabidopsis thaliana]
Length = 200
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 MGES-RNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S + R+S HQ+ G GSVAD++LWR+ +G+V++LISST W LFER Y
Sbjct: 1 MGDSVSSSSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGY 53
>ref|XP_003555964.1| PREDICTED: uncharacterized LOC100527029 [Glycine max]
Length = 204
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 91 MGESRNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S R+S H+ G G VAD+VLW++W G+V VL+S+T+LW LFER Y
Sbjct: 1 MGDSN---RISVHRVLGEGLVADVVLWKNWRGAVAVLVSATTLWYLFERAGY 49
>gb|AAM65155.1| unknown [Arabidopsis thaliana]
Length = 200
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 91 MGES-RNPGRLSAHQAFGGGSVADIVLWRSWSGSVLVLISSTSLWLLFERGEY 246
MG+S + R+S HQ+ G GSVAD++LWR+ +G+V++LISST W LFER Y
Sbjct: 1 MGDSVSSSSRVSVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGY 53