BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00030272
         (206 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   106   3e-21
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   105   8e-21
gb|ABA98073.1| retrotransposon protein, putative, unclassified [...   105   8e-21
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   103   2e-20
ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [S...   103   3e-20
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   102   4e-20
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   102   4e-20
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   102   7e-20
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   102   7e-20
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]    102   7e-20
emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vu...   101   9e-20
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]              101   9e-20
emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. marit...   101   9e-20
ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [S...   100   2e-19
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S...   100   2e-19
ref|XP_002457887.1| hypothetical protein SORBIDRAFT_03g018791 [S...   100   2e-19
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...   100   3e-19
emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]        100   3e-19
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...    99   4e-19
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ...    99   4e-19

>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = +1

Query: 1    LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
            ++RDWPIHQLDVKNAFLHG+L+ET+YC QPP F DP RP  VCRL K+ YGLKQAP+AW+
Sbjct: 1181 VSRDWPIHQLDVKNAFLHGTLQETVYCIQPPGFVDPTRPDMVCRLNKSLYGLKQAPRAWY 1240

Query: 181  QCLAAYII 204
               A +++
Sbjct: 1241 SRFATFLL 1248


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  105 bits (261), Expect = 8e-21
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +1

Query: 4    ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
            +R WPIHQLDVKNAFLHG L+ET+YCQQPP F DP  P  VCRL+K+ YGLKQAP+AW+Q
Sbjct: 1533 SRAWPIHQLDVKNAFLHGHLEETVYCQQPPGFVDPGAPDYVCRLQKSLYGLKQAPRAWYQ 1592

Query: 184  CLAAYI 201
              A +I
Sbjct: 1593 RFATFI 1598


>gb|ABA98073.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 724

 Score =  105 bits (261), Expect = 8e-21
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           ++RDWP+HQLDVKNAFLHG+L+ET+YC QPP F DP RP  VC L K+ YGLKQAP+AW+
Sbjct: 324 VSRDWPVHQLDVKNAFLHGTLQETVYCIQPPGFVDPTRPDMVCYLNKSLYGLKQAPRAWY 383

Query: 181 QCLAAYII 204
              A Y++
Sbjct: 384 SRFATYLL 391


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG+L+ET+YCQQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 609 SRSWPIHQLDVKNAFLHGNLEETVYCQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQ 668

Query: 184 CLAAYI 201
             A YI
Sbjct: 669 RFATYI 674


>ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
           gi|241943826|gb|EES16971.1| hypothetical protein
           SORBIDRAFT_08g010840 [Sorghum bicolor]
          Length = 725

 Score =  103 bits (256), Expect = 3e-20
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG L ET+YCQQPP F DP RP  VC L+++ YGLKQAP+AW Q
Sbjct: 406 SRQWPIHQLDVKNAFLHGHLHETVYCQQPPGFVDPARPDAVCLLQRSLYGLKQAPRAWDQ 465

Query: 184 CLAAYI 201
             A Y+
Sbjct: 466 RFATYV 471


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  102 bits (255), Expect = 4e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG+L+ET+YCQQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 697 SRSWPIHQLDVKNAFLHGNLEETVYCQQPSGFVDPSAPTAVCLLQKSLYGLKQAPRAWYQ 756

Query: 184 CLAAYI 201
             A YI
Sbjct: 757 RFATYI 762


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1099

 Score =  102 bits (255), Expect = 4e-20
 Identities = 43/68 (63%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           + R WP+HQLDVKNAFLHG+L+ET+YC QP  FED  RP  VCRL K+ YGLKQAP+AW+
Sbjct: 693 VTRQWPVHQLDVKNAFLHGALQETVYCTQPSGFEDTTRPDMVCRLNKSLYGLKQAPRAWY 752

Query: 181 QCLAAYII 204
              A+Y++
Sbjct: 753 SRFASYLL 760


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG+L+ET+YCQQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 735 SRSWPIHQLDVKNAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQ 794

Query: 184 CLAAYI 201
             A YI
Sbjct: 795 RFATYI 800


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +1

Query: 4    ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
            +R WPIHQLDVKNAFLHG+L+ET+YCQQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 935  SRSWPIHQLDVKNAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQ 994

Query: 184  CLAAYI 201
              A YI
Sbjct: 995  RFATYI 1000


>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1146

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +1

Query: 4    ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
            +R WPIHQLDVKNAFLHG+L+ET+YCQQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 831  SRSWPIHQLDVKNAFLHGNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQ 890

Query: 184  CLAAYI 201
              A YI
Sbjct: 891  RFATYI 896


>emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
           gi|54606703|dbj|BAD66726.1| orf167b [Beta vulgaris
           subsp. vulgaris] gi|54606747|dbj|BAD66770.1| orf167b
           [Beta vulgaris subsp. vulgaris]
          Length = 167

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           L++ WPIHQLDVKNAFLHG LKET+Y  QP  F+DP RP  VC LRK+ YGLKQAP+AW+
Sbjct: 55  LSKSWPIHQLDVKNAFLHGELKETVYMHQPLGFKDPDRPNHVCLLRKSLYGLKQAPRAWY 114

Query: 181 QCLAAYI 201
           +  A Y+
Sbjct: 115 KRFAGYV 121


>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
          Length = 534

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           L++DWPIHQLDVKNAFLHG+L ET+YC QP  F D  RPG VCRL K+ YGLKQAP+AW 
Sbjct: 125 LSQDWPIHQLDVKNAFLHGTLAETVYCVQPTGFVDSSRPGLVCRLNKSLYGLKQAPRAWH 184

Query: 181 QCLAAYI 201
              A+Y+
Sbjct: 185 HRFASYL 191


>emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 167

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           L++ WPIHQLDVKNAFLHG LKET+Y  QP  F+DP RP  VC LRK+ YGLKQAP+AW+
Sbjct: 55  LSKSWPIHQLDVKNAFLHGELKETVYMHQPLGFKDPDRPNHVCLLRKSLYGLKQAPRAWY 114

Query: 181 QCLAAYI 201
           +  A Y+
Sbjct: 115 KRFAGYV 121


>ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [Sorghum bicolor]
           gi|241940679|gb|EES13824.1| hypothetical protein
           SORBIDRAFT_07g020255 [Sorghum bicolor]
          Length = 987

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/68 (64%), Positives = 52/68 (76%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           LAR WP+HQLDVKNAFLHG L ET+YC QP  F D  RP  VCRL K+ YGLKQAP+AW 
Sbjct: 579 LARSWPVHQLDVKNAFLHGHLTETVYCSQPAGFVDSSRPDMVCRLNKSLYGLKQAPRAWH 638

Query: 181 QCLAAYII 204
             +AA+++
Sbjct: 639 SRIAAFLV 646


>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
           gi|241937618|gb|EES10763.1| hypothetical protein
           SORBIDRAFT_06g016046 [Sorghum bicolor]
          Length = 856

 Score =  100 bits (250), Expect = 2e-19
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +1

Query: 10  DWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQCL 189
           DWPIHQLDVKNAFLHG+L ET+YC QP  F DP  PG VC+L K+ YGLKQAP+AW+   
Sbjct: 457 DWPIHQLDVKNAFLHGTLSETVYCCQPTGFADPALPGHVCKLNKSLYGLKQAPRAWYSRF 516

Query: 190 AAYII 204
           A++++
Sbjct: 517 ASFLL 521


>ref|XP_002457887.1| hypothetical protein SORBIDRAFT_03g018791 [Sorghum bicolor]
           gi|241929862|gb|EES03007.1| hypothetical protein
           SORBIDRAFT_03g018791 [Sorghum bicolor]
          Length = 683

 Score =  100 bits (249), Expect = 2e-19
 Identities = 44/68 (64%), Positives = 51/68 (75%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           L R WP+HQLDVKNAFLHG L ET+YC QP RF D  RP  VCRL K+ YGLKQAP+AW 
Sbjct: 294 LTRGWPVHQLDVKNAFLHGVLSETVYCSQPARFVDSSRPDMVCRLNKSLYGLKQAPRAWN 353

Query: 181 QCLAAYII 204
              AA+++
Sbjct: 354 HLFAAFLL 361


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 989

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 42/68 (61%), Positives = 52/68 (76%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           L+R WP+HQLDVKNAFLHG+L ET++  QP  FEDP  PG VCRL K+ YGLKQ P+AW+
Sbjct: 568 LSRGWPVHQLDVKNAFLHGTLSETVFAAQPTGFEDPTHPGYVCRLNKSLYGLKQTPRAWY 627

Query: 181 QCLAAYII 204
              A +I+
Sbjct: 628 SRFATFIL 635


>emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa Japonica Group]
          Length = 322

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 41/68 (60%), Positives = 55/68 (80%)
 Frame = +1

Query: 1   LARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWF 180
           ++RDWP+HQLDVKNAFLH +L+ET+YC QP  F DP +P  VCRL K+ YGLKQAP+AW+
Sbjct: 125 VSRDWPVHQLDVKNAFLHRTLQETVYCTQPAGFVDPTKPDLVCRLNKSLYGLKQAPRAWY 184

Query: 181 QCLAAYII 204
              A++++
Sbjct: 185 SRFASFLL 192


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
           gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
           [Oryza sativa Japonica Group]
          Length = 841

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 44/66 (66%), Positives = 52/66 (78%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG+L+ET+Y QQP  F DP  P  VC L+K+ YGLKQAP+AW+Q
Sbjct: 426 SRSWPIHQLDVKNAFLHGNLEETVYYQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQ 485

Query: 184 CLAAYI 201
             A YI
Sbjct: 486 RFATYI 491


>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
           gi|241947225|gb|EES20370.1| hypothetical protein
           SORBIDRAFT_0019s003280 [Sorghum bicolor]
          Length = 761

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 41/67 (61%), Positives = 51/67 (76%)
 Frame = +1

Query: 4   ARDWPIHQLDVKNAFLHGSLKETIYCQQPPRFEDPRRPGDVCRLRKARYGLKQAPQAWFQ 183
           +R WPIHQLDVKNAFLHG+L ET+YC QP  F D   P  VC+L K+ YGLKQAP+AW  
Sbjct: 346 SRQWPIHQLDVKNAFLHGTLSETVYCSQPTGFADSTHPTHVCKLNKSLYGLKQAPRAWHS 405

Query: 184 CLAAYII 204
           C A++++
Sbjct: 406 CFASHLL 412