BLASTX nr result

ID: Rheum21_contig00030257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00030257
         (335 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313516.2| hypothetical protein POPTR_0009s01800g [Popu...    60   2e-07
gb|EXB74665.1| hypothetical protein L484_007671 [Morus notabilis]      56   4e-06
ref|NP_200860.1| late embryogenesis abundant protein-like protei...    56   6e-06
ref|XP_004251121.1| PREDICTED: uncharacterized protein LOC101254...    55   7e-06

>ref|XP_002313516.2| hypothetical protein POPTR_0009s01800g [Populus trichocarpa]
           gi|550330833|gb|EEE87471.2| hypothetical protein
           POPTR_0009s01800g [Populus trichocarpa]
          Length = 389

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -1

Query: 149 MLPRRGKQERAICSAEGRCLNEVVTCPAECPERRPPGMSQRKACVVDC 6
           + P    QERA C A+G C N++V CPA+CPE++P    + KAC VDC
Sbjct: 91  LTPLGSGQERAQCKAKGHCKNKIVVCPAQCPEKKPKKNKKHKACFVDC 138


>gb|EXB74665.1| hypothetical protein L484_007671 [Morus notabilis]
          Length = 392

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -1

Query: 128 QERAICSAEGRCLNEVVTCPAECPERRPPGMSQRKACVVDC 6
           QERA C   G+C ++ +TCPAECP R+P    ++K C VDC
Sbjct: 98  QERAKCKKSGKCKSKTLTCPAECPHRKPKNNKKKKGCYVDC 138


>ref|NP_200860.1| late embryogenesis abundant protein-like protein [Arabidopsis
           thaliana] gi|9757754|dbj|BAB08235.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|40823110|gb|AAR92259.1| At5g60520 [Arabidopsis
           thaliana] gi|332009956|gb|AED97339.1| late embryogenesis
           abundant protein-like protein [Arabidopsis thaliana]
          Length = 338

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = -1

Query: 149 MLPRRGKQERAICSAEGRCLNEVVTCPAECPERRPPGMSQRKACVVDC 6
           + P    QER  C A G C  +++TCP ECPER+P    ++KAC +DC
Sbjct: 41  LYPLGSGQERVQCLARGSCNQKILTCPKECPERKPKMNKKKKACFIDC 88


>ref|XP_004251121.1| PREDICTED: uncharacterized protein LOC101254662 [Solanum
           lycopersicum]
          Length = 342

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = -1

Query: 161 NGLRMLPRRGKQERAICSAEGRCLNEVVTCPAECPERRPPGMSQRKACVVDC 6
           N L  LP  G QERA C+ +G C    +TCP ECP+R+P    ++K C +DC
Sbjct: 44  NVLDPLPGTG-QERAFCTVQGVCYYRTLTCPTECPQRKPKQNKKQKGCYIDC 94


Top