BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029843
         (303 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY21925.1| Tetratricopeptide repeat-like superfamily protein...   104   1e-20
gb|EMJ12168.1| hypothetical protein PRUPE_ppa022615mg [Prunus pe...   102   4e-20
gb|EXB38558.1| hypothetical protein L484_008586 [Morus notabilis]      95   1e-17
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]    89   6e-16
emb|CBI15196.3| unnamed protein product [Vitis vinifera]               89   8e-16
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_002310922.2| hypothetical protein POPTR_0008s00430g [Popu...    88   1e-15
ref|XP_006477483.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_006440636.1| hypothetical protein CICLE_v10019550mg [Citr...    86   5e-15
ref|XP_006364580.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_004236477.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_004301138.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|NP_001189950.1| uncharacterized protein [Arabidopsis thalian...    76   5e-12
ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ...    76   5e-12
ref|XP_004296686.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_006299530.1| hypothetical protein CARUB_v10015702mg [Caps...    74   2e-11
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11

>gb|EOY21925.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 551

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/95 (54%), Positives = 70/95 (73%)
 Frame = +1

Query: 19  ARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNV 198
           +R +   +SV+L N+M   G+ PD ++YSY LSAC + GMLREG+Q+HG+V++DGY SNV
Sbjct: 93  SRTENPEKSVELYNQMVATGAIPDGFTYSYLLSACARSGMLREGEQVHGKVLADGYCSNV 152

Query: 199 VIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            + T+LVNLYA   G  GD   YAR+VFDE+ ERN
Sbjct: 153 FVRTNLVNLYAMVGG--GDGIGYARRVFDEMGERN 185


>gb|EMJ12168.1| hypothetical protein PRUPE_ppa022615mg [Prunus persica]
          Length = 556

 Score =  102 bits (255), Expect = 4e-20
 Identities = 49/95 (51%), Positives = 70/95 (73%)
 Frame = +1

Query: 19  ARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNV 198
           +R +   +SVQL NR+   G+EPD ++Y Y LSAC + G++REGKQ+H RV+++G+ SNV
Sbjct: 93  SRSETPRKSVQLYNRLVGVGAEPDGFTYLYVLSACARSGLVREGKQVHARVLANGFGSNV 152

Query: 199 VIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            + TSLVNLYA  CG SG    YAR++FD++ ER+
Sbjct: 153 FVQTSLVNLYA-ICGGSGCGVEYARRLFDDMGERS 186


>gb|EXB38558.1| hypothetical protein L484_008586 [Morus notabilis]
          Length = 543

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/94 (48%), Positives = 65/94 (69%)
 Frame = +1

Query: 22  RGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVV 201
           R +    SV+  NRM    ++PD Y++SY LSAC + G+ REG+QIHG+V+++GY SNV 
Sbjct: 81  RSETPKRSVECFNRMAETEAKPDGYTFSYLLSACARSGLFREGEQIHGKVLANGYCSNVF 140

Query: 202 IGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           +G++LVNLYA   GE G     AR+ FD+L E+N
Sbjct: 141 VGSNLVNLYA--VGEGGGLVECARRAFDDLREKN 172


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
 Frame = +1

Query: 22  RGKPSAES----VQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYA 189
           RG   +E+    V+L NRM    +EP+E++YS+ +  C +  +LREG+Q+HGRVV++GY 
Sbjct: 105 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164

Query: 190 SNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           +NV + TSLVNLYA   G  G     AR+VFDE+ +RN
Sbjct: 165 TNVFVRTSLVNLYAIAGGYDG--VRKARRVFDEIVDRN 200


>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
 Frame = +1

Query: 22  RGKPSAES----VQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYA 189
           RG   +E+    V+L NRM    +EP+E++YS+ +  C +  +LREG+Q+HGRVV++GY 
Sbjct: 3   RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 62

Query: 190 SNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           +NV + TSLVNLYA   G  G     AR+VFDE+ +RN
Sbjct: 63  TNVFVRTSLVNLYAIAGGYDG--VRKARRVFDEIVDRN 98


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%)
 Frame = +1

Query: 22  RGKPSAES----VQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYA 189
           RG   +E+    V+L NRM    +EP+E++YS+ +  C +  +LREG+Q+HGRVV++GY 
Sbjct: 89  RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 148

Query: 190 SNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           +NV + TSLVNLYA   G  G     AR+VFDE+ +RN
Sbjct: 149 TNVFVRTSLVNLYAIAGGYDG--VRKARRVFDEIVDRN 184


>ref|XP_002310922.2| hypothetical protein POPTR_0008s00430g [Populus trichocarpa]
           gi|550332067|gb|EEE88289.2| hypothetical protein
           POPTR_0008s00430g [Populus trichocarpa]
          Length = 554

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   MIRLSSARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSD 180
           MIR + AR +  A+S+Q  N+M    S PD ++YS+ L+AC     LREG+Q+H +V+++
Sbjct: 97  MIR-AHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTSSLSLREGQQVHSKVLTN 155

Query: 181 G-YASNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           G Y+SNV + + LVN YA+  G  G     ARKVFD++SERN
Sbjct: 156 GYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERN 197


>ref|XP_006477483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 556

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/101 (46%), Positives = 67/101 (66%)
 Frame = +1

Query: 1   MIRLSSARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSD 180
           MIR   AR +   +SV L  +M ++ +EPDEY+YS+ LS C + G+ REG+Q+HGRV++ 
Sbjct: 89  MIR-GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGLFREGEQVHGRVLAS 147

Query: 181 GYASNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           GY SNV I T+L+NLY    GE G     AR +FD++  R+
Sbjct: 148 GYCSNVFIRTNLMNLYLMSGGECGVG--CARLLFDDMPARS 186


>ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 45/95 (47%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
 Frame = +1

Query: 22  RGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVV 201
           R K S +S++L  RM   G E + ++YS+ LSACV+  + REG+QIHGRV+ +GY SN+ 
Sbjct: 102 RSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLY 161

Query: 202 IGTSLVNLYASCCGESGD-DFLYARKVFDELSERN 303
           + T+L+NLYA+  G+ GD D   AR +FDE+ + N
Sbjct: 162 VRTNLINLYAN-GGDGGDFDLKRARYLFDEMPDSN 195


>ref|XP_006440636.1| hypothetical protein CICLE_v10019550mg [Citrus clementina]
           gi|557542898|gb|ESR53876.1| hypothetical protein
           CICLE_v10019550mg [Citrus clementina]
          Length = 556

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 46/101 (45%), Positives = 66/101 (65%)
 Frame = +1

Query: 1   MIRLSSARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSD 180
           MIR   AR +   +SV L  +M ++ +EPDEY+YS+ LS C + G  REG+Q+HGRV++ 
Sbjct: 89  MIR-GHARSETPEKSVYLYKQMIDKETEPDEYTYSFLLSVCARCGFFREGEQVHGRVLAS 147

Query: 181 GYASNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           GY SNV + T+L+NLY    GE G     AR +FD++  R+
Sbjct: 148 GYCSNVFMRTNLMNLYLMSGGECGVG--CARLLFDDMPARS 186


>ref|XP_006364580.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 552

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/95 (44%), Positives = 63/95 (66%)
 Frame = +1

Query: 19  ARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNV 198
           AR +   ES++L N+M    + PD Y+YSY L+ C + G+ REG+Q+HG++V      NV
Sbjct: 92  ARSENPQESIELFNQMEISTAMPDGYTYSYVLNGCAKGGLFREGQQVHGKIVKKWSLLNV 151

Query: 199 VIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            + T+LVNLY++  G++  D   ARKVFDE+ E+N
Sbjct: 152 YVQTNLVNLYSTTRGQNCID--DARKVFDEMIEKN 184


>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Cicer arietinum]
          Length = 1253

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/94 (42%), Positives = 64/94 (68%)
 Frame = +1

Query: 22  RGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVV 201
           R +   +SVQ  N+M +  SEPDE++YS+ LSAC Q G++REG+Q+H  V++ GY S+V 
Sbjct: 91  RSRTPWKSVQYYNQMVSTESEPDEFTYSFLLSACAQGGLVREGEQVHATVLAKGYCSDVF 150

Query: 202 IGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           + T+L+N Y+     +G     AR VFD++++R+
Sbjct: 151 VNTNLINFYS-----NGGGVEQARHVFDDMTQRS 179


>ref|XP_004236477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 552

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/95 (42%), Positives = 65/95 (68%)
 Frame = +1

Query: 19  ARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNV 198
           AR +   +S++L N+M    + PD Y+YSY L+ C + G+ REG+Q+HG++V +    NV
Sbjct: 92  ARSENPQKSIELFNQMEISTAMPDGYTYSYVLNGCAKGGLFREGQQVHGKIVKNWSLLNV 151

Query: 199 VIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            + T+LVNLY++  GE+  D   A+K+FDE++E+N
Sbjct: 152 FVQTNLVNLYSTTGGENCID--NAQKMFDEMTEKN 184


>ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +1

Query: 22  RGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVV 201
           R K S +S++L  RM   G E + ++YS+ LSACV+  + REG+QIHGRV+ +GY SN+ 
Sbjct: 102 RSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLY 161

Query: 202 IGTSLVNLYASCCGESGD-DFLYARKVFDELSERN 303
           + T+L+NLYA+  G+ GD D   A  +FDE+ + N
Sbjct: 162 VRTNLINLYAN-GGDGGDFDLKRALYLFDEMPDSN 195


>ref|XP_004301138.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Fragaria vesca subsp. vesca]
          Length = 335

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/88 (47%), Positives = 61/88 (69%)
 Frame = +1

Query: 40  ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVVIGTSLV 219
           ++V+L  R+    +EPD Y+Y Y +SAC + G++REG+Q+HGRV+  G+  NV I TSLV
Sbjct: 88  KAVELYKRLVATEAEPDGYTYLYVVSACARSGLVREGEQLHGRVLVGGFGCNVFIQTSLV 147

Query: 220 NLYASCCGESGDDFLYARKVFDELSERN 303
           + YA+  G S     YAR+VFDE+ ER+
Sbjct: 148 SFYATGGGLS-SGVGYARQVFDEMRERS 174


>ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22690 gi|9279687|dbj|BAB01244.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643145|gb|AEE76666.1| uncharacterized protein
           AT3G22690 [Arabidopsis thaliana]
          Length = 842

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = +1

Query: 40  ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVVIGTSLV 219
           E++ L  RM N G  PD+Y++ + LSAC +      G QIHG +V  GYA ++ +  SLV
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176

Query: 220 NLYASCCGESGDDFLYARKVFDELSERN 303
           + YA  CGE       ARKVFDE+SERN
Sbjct: 177 HFYAE-CGELDS----ARKVFDEMSERN 199


>ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332643144|gb|AEE76665.1| uncharacterized protein
           AT3G22690 [Arabidopsis thaliana]
          Length = 938

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = +1

Query: 40  ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVVIGTSLV 219
           E++ L  RM N G  PD+Y++ + LSAC +      G QIHG +V  GYA ++ +  SLV
Sbjct: 117 EAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176

Query: 220 NLYASCCGESGDDFLYARKVFDELSERN 303
           + YA  CGE       ARKVFDE+SERN
Sbjct: 177 HFYAE-CGELDS----ARKVFDEMSERN 199


>ref|XP_004296686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Fragaria vesca subsp. vesca]
          Length = 843

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
 Frame = +1

Query: 13  SSARGKPSA----ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSD 180
           S  RG  SA    E++ L  +M  QG  PD++++ +ALSAC +     EG Q+HG +V  
Sbjct: 104 SLIRGYSSAGLGDEAIGLYVQMVVQGVSPDKFTFPFALSACSKVVAFCEGVQLHGSIVKM 163

Query: 181 GYASNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
           G   +V +G SL++ YA  CGE G    YARKVFDE+ +RN
Sbjct: 164 GLEGDVFVGNSLIHFYAE-CGEMG----YARKVFDEMRDRN 199


>ref|XP_006299530.1| hypothetical protein CARUB_v10015702mg [Capsella rubella]
           gi|482568239|gb|EOA32428.1| hypothetical protein
           CARUB_v10015702mg [Capsella rubella]
          Length = 844

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +1

Query: 13  SSARGKPSA----ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSD 180
           S  RG  SA    E++ L  RM N G  PD+Y++ + LSAC +      G QIHG +V  
Sbjct: 106 SMIRGYASAGLCDEAILLFLRMMNSGISPDKYTFPFGLSACAKRRAKGNGIQIHGLIVKM 165

Query: 181 GYASNVVIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            YA ++ +  SLV+ YA  CGE       ARKVFDE+SERN
Sbjct: 166 DYAKDLFVQNSLVHFYAE-CGELDS----ARKVFDEMSERN 201


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/88 (40%), Positives = 54/88 (61%)
 Frame = +1

Query: 40  ESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNVVIGTSLV 219
           +++ L   M   G  PD ++YS  LSAC + G+L  GKQ+H RV+  G A +V +G SLV
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLV 273

Query: 220 NLYASCCGESGDDFLYARKVFDELSERN 303
           ++YA C  +   D   +RKVF+++ E N
Sbjct: 274 DMYAKCAADGSVD--DSRKVFEQMPEHN 299



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/95 (30%), Positives = 52/95 (54%)
 Frame = +1

Query: 19  ARGKPSAESVQLLNRMRNQGSEPDEYSYSYALSACVQFGMLREGKQIHGRVVSDGYASNV 198
           A+   S E+  L N + + G     ++++  LS     G + +G+QIHGR++  GY SN 
Sbjct: 413 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472

Query: 199 VIGTSLVNLYASCCGESGDDFLYARKVFDELSERN 303
            I  +L+++Y+ C      +   A +VF+E+ +RN
Sbjct: 473 CICNALISMYSRC-----GNIEAAFQVFNEMEDRN 502