BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029713
         (302 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_008364245.1| hypothetical protein [Nocardioidaceae bacter...   122   4e-26
ref|WP_010851850.1| conserved hypothetical protein [Tetrasphaera...   119   5e-25
ref|WP_007263335.1| conserved hypothetical protein, partial [Str...   109   3e-22
ref|WP_009187518.1| hypothetical protein [Streptomyces sp. e14] ...   106   3e-21
ref|WP_009191001.1| hypothetical protein [Streptomyces sp. e14] ...   102   5e-20
ref|WP_004929700.1| hypothetical protein [Streptomyces griseofla...   100   3e-19
ref|WP_009233527.1| hypothetical protein [Actinomyces sp. oral t...    99   4e-19
ref|WP_009081422.1| conserved hypothetical protein [Streptomyces...    83   2e-14
ref|WP_006599940.1| conserved hypothetical protein, partial [Pse...    83   3e-14
ref|WP_009188948.1| hypothetical protein [Streptomyces sp. e14] ...    82   1e-13
gb|AGO88040.1| hypothetical protein [uncultured bacterium 122006...    81   2e-13
ref|WP_009187880.1| hypothetical protein [Streptomyces sp. e14] ...    80   2e-13
emb|CCH85655.1| protein of unknown function [Modestobacter marinus]    57   4e-13
ref|WP_016520404.1| hypothetical protein, partial [Treponema soc...    62   1e-11
ref|WP_004846360.1| hypothetical protein [[Ruminococcus] torques...    69   5e-10
ref|WP_005362050.1| hypothetical protein [Eubacterium ventriosum...    65   1e-08
ref|WP_009067872.1| conserved hypothetical protein, partial [Str...    64   2e-08
ref|WP_009188947.1| hypothetical protein [Streptomyces sp. e14] ...    64   2e-08
ref|WP_009713210.1| hypothetical protein, partial [Streptomyces ...    62   8e-08
ref|WP_021554219.1| hypothetical protein, partial [Escherichia c...    58   1e-06

>ref|WP_008364245.1| hypothetical protein [Nocardioidaceae bacterium Broad-1]
           gi|325947935|gb|EGD40054.1| hypothetical protein
           NBCG_05699 [Nocardioidaceae bacterium Broad-1]
          Length = 86

 Score =  122 bits (307), Expect = 4e-26
 Identities = 62/88 (70%), Positives = 70/88 (79%)
 Frame = +2

Query: 35  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 214
           MWPVTLSGRLPV+ALVSHY TNKLI RE IP R+ F    MQ+ ++SGI+  F  LSQS 
Sbjct: 1   MWPVTLSGRLPVEALVSHYLTNKLIGREHIPGRKTFHNHPMQEVVVSGINHRFRWLSQSL 60

Query: 215 GQVTHVLLTRSPLEHPTKAGPFRSTCMC 298
           GQ+THVLLTRSPLE+P   GPFRSTCMC
Sbjct: 61  GQITHVLLTRSPLEYP--EGPFRSTCMC 86


>ref|WP_010851850.1| conserved hypothetical protein [Tetrasphaera elongata]
           gi|478759114|emb|CCH69100.1| conserved hypothetical
           protein [Tetrasphaera elongata Lp2]
          Length = 130

 Score =  119 bits (297), Expect = 5e-25
 Identities = 62/84 (73%), Positives = 67/84 (79%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGI 181
           SRRSLGR+SVP+WPV LSGRLPV ALVSHY TNKLI RESIP+R+ F T  M   L+SGI
Sbjct: 17  SRRSLGRVSVPVWPVALSGRLPVVALVSHYLTNKLIGRESIPDRKTFQTVEMPLRLVSGI 76

Query: 182 SPSFLKLSQSQGQVTHVLLTRSPL 253
           S  F  L QS GQVTHVLLTRSPL
Sbjct: 77  SSCFQLLFQSLGQVTHVLLTRSPL 100


>ref|WP_007263335.1| conserved hypothetical protein, partial [Streptomyces sp. C]
           gi|302442572|gb|EFL14388.1| conserved hypothetical
           protein [Streptomyces sp. C]
          Length = 84

 Score =  109 bits (273), Expect = 3e-22
 Identities = 58/86 (67%), Positives = 63/86 (73%)
 Frame = +2

Query: 41  PVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQGQ 220
           PV LSGRLPV ALV HYPTNKLI R  I +RR+F  P MQ  +LSGI P F  LSQS+GQ
Sbjct: 1   PVALSGRLPVVALVGHYPTNKLIGRGLILHRRSFQLPPMQAGVLSGIRPRFQGLSQSEGQ 60

Query: 221 VTHVLLTRSPLEHPTKAGPFRSTCMC 298
           + HVLLTRSPL HP   G  RSTCMC
Sbjct: 61  IAHVLLTRSPLIHP--EGLHRSTCMC 84


>ref|WP_009187518.1| hypothetical protein [Streptomyces sp. e14]
           gi|292831588|gb|EFF89937.1| hypothetical protein
           SSTG_00255 [Streptomyces sp. e14]
          Length = 86

 Score =  106 bits (265), Expect = 3e-21
 Identities = 58/88 (65%), Positives = 65/88 (73%)
 Frame = +2

Query: 35  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 214
           MWPV LSGRLPV ALVSHY TNKLI R  I +RR+FP   M + L+SGI P F  LSQS+
Sbjct: 1   MWPVALSGRLPVVALVSHYLTNKLIGRGLILHRRSFPASKMPRRLVSGIRPRFQGLSQSE 60

Query: 215 GQVTHVLLTRSPLEHPTKAGPFRSTCMC 298
           GQ+ HVLLTRSPL  PT+    RSTCMC
Sbjct: 61  GQIAHVLLTRSPL-IPTEV-VHRSTCMC 86


>ref|WP_009191001.1| hypothetical protein [Streptomyces sp. e14]
           gi|292835109|gb|EFF93458.1| hypothetical protein
           SSTG_03777 [Streptomyces sp. e14]
          Length = 86

 Score =  102 bits (254), Expect = 5e-20
 Identities = 57/88 (64%), Positives = 63/88 (71%)
 Frame = +2

Query: 35  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 214
           MWPV LSGRLPV ALVS Y TNKLI R  I +RR+FP   M   L+SGI P F  LSQS+
Sbjct: 1   MWPVALSGRLPVVALVSRYLTNKLIGRGLILHRRSFPASKMPWRLVSGIRPRFQGLSQSE 60

Query: 215 GQVTHVLLTRSPLEHPTKAGPFRSTCMC 298
           GQ+ HVLLTRSPL  PT+    RSTCMC
Sbjct: 61  GQIAHVLLTRSPL-IPTEV-VHRSTCMC 86


>ref|WP_004929700.1| hypothetical protein [Streptomyces griseoflavus]
           gi|302477482|gb|EFL40575.1| hypothetical protein
           SSRG_03379 [Streptomyces griseoflavus Tu4000]
          Length = 86

 Score =  100 bits (248), Expect = 3e-19
 Identities = 56/88 (63%), Positives = 63/88 (71%)
 Frame = +2

Query: 35  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQ 214
           MWPV LSGRLPV ALVSHY TNKLI R  I +RR+F    M   ++SGI P F  LSQS+
Sbjct: 1   MWPVALSGRLPVVALVSHYLTNKLIGRGLILHRRSFQPLQMPAGVISGIRPRFQGLSQSE 60

Query: 215 GQVTHVLLTRSPLEHPTKAGPFRSTCMC 298
           GQ+ HVLLTRSPL  PT+    RSTCMC
Sbjct: 61  GQIAHVLLTRSPL-IPTEV-VHRSTCMC 86


>ref|WP_009233527.1| hypothetical protein [Actinomyces sp. oral taxon 849]
           gi|365264633|gb|EHM94433.1| hypothetical protein
           HMPREF0975_01540 [Actinomyces sp. oral taxon 849 str.
           F0330]
          Length = 255

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
 Frame = +2

Query: 35  MWPVTLSGRLPVKALVSHYPTNKLISRESIPNRR-----NFPTPTMQQELLSGISPSFLK 199
           MWP TLSGRLPV ALV H+PTNKLI RE IP+R+     +FP P   +  +  ISP+F++
Sbjct: 1   MWPSTLSGRLPVTALVGHHPTNKLIGREPIPHRKHPKAQSFPNPPCDRPGIPRISPTFMR 60

Query: 200 LSQSQGQVTHVLLTRSPLEHPTKAG 274
           LS+ +GQVTHVLLTRSPL H  + G
Sbjct: 61  LSRRRGQVTHVLLTRSPLIHTHQKG 85


>ref|WP_009081422.1| conserved hypothetical protein [Streptomyces sp. AA4]
           gi|302438014|gb|EFL09830.1| conserved hypothetical
           protein [Streptomyces sp. AA4]
          Length = 121

 Score = 83.2 bits (204), Expect(2) = 2e-14
 Identities = 41/59 (69%), Positives = 45/59 (76%)
 Frame = +2

Query: 77  LVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQGQVTHVLLTRSPL 253
           +V HYPTNKLI R  IP RRNFP P M   ++SGI PSF  LSQS GQ+THVLLTRSPL
Sbjct: 1   MVGHYPTNKLIGRGFIPYRRNFPPPQMPAVVVSGIRPSFPGLSQSTGQITHVLLTRSPL 59



 Score = 21.6 bits (44), Expect(2) = 2e-14
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 261 PQKQGLSVRLACVK 302
           P +   SVRLACVK
Sbjct: 61  PGRNRFSVRLACVK 74


>ref|WP_006599940.1| conserved hypothetical protein, partial [Pseudoramibacter
           alactolyticus] gi|315620384|gb|EFV00405.1| hypothetical
           protein HMP0721_2517, partial [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 53

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 187 QFPEVIPKSRAGYSRVTHPFATRAPHKSRAFPFDLHVL 300
           QFPEVIPKSRAGYSRVTHPFATRAPHKSRAFPFDLHVL
Sbjct: 1   QFPEVIPKSRAGYSRVTHPFATRAPHKSRAFPFDLHVL 38


>ref|WP_009188948.1| hypothetical protein [Streptomyces sp. e14]
           gi|292833026|gb|EFF91375.1| hypothetical protein
           SSTG_01694 [Streptomyces sp. e14]
           gi|292833487|gb|EFF91836.1| hypothetical protein
           SSTG_02155 [Streptomyces sp. e14]
          Length = 72

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +2

Query: 77  LVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQGQVTHVLLTRSPLE 256
           +VSHY TNKLI R  I +RR+FP   M + L+SGI P F  LSQS+GQ+ HVLLTRSPL 
Sbjct: 1   MVSHYLTNKLIGRGLILHRRSFPASKMPRRLVSGIRPRFQGLSQSEGQIAHVLLTRSPL- 59

Query: 257 HPTKAGPFRSTCMC 298
            PT+    RSTCMC
Sbjct: 60  IPTEV-VHRSTCMC 72


>gb|AGO88040.1| hypothetical protein [uncultured bacterium 122006-I05]
          Length = 162

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIPN---RRNFPTPTMQQELL 172
           SRRSLGRIS+P+W + LS +LP+ ALVS Y TNKLI    I     +    T       L
Sbjct: 45  SRRSLGRISIPVWLIILSDQLPIIALVSFYLTNKLIGHRPIQKHDPKTALTTYPKGFAAL 104

Query: 173 SGISPSFLKLSQSQGQVTHVLLTRSPL 253
           SGISP+F  LSQS GQVT+ LLTR P+
Sbjct: 105 SGISPAFAGLSQSLGQVTYALLTRPPV 131


>ref|WP_009187880.1| hypothetical protein [Streptomyces sp. e14]
           gi|292831953|gb|EFF90302.1| hypothetical protein
           SSTG_00620 [Streptomyces sp. e14]
           gi|292834016|gb|EFF92365.1| hypothetical protein
           SSTG_02684 [Streptomyces sp. e14]
          Length = 72

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/74 (60%), Positives = 52/74 (70%)
 Frame = +2

Query: 77  LVSHYPTNKLISRESIPNRRNFPTPTMQQELLSGISPSFLKLSQSQGQVTHVLLTRSPLE 256
           +VSHY TNKLI R  I +RR+FP   M   L+SGI P F  LSQS+GQ+ HVLLTRSPL 
Sbjct: 1   MVSHYLTNKLIGRGLILHRRSFPASKMPWRLVSGIRPRFQGLSQSEGQIAHVLLTRSPL- 59

Query: 257 HPTKAGPFRSTCMC 298
            PT+    RSTCMC
Sbjct: 60  IPTEV-VHRSTCMC 72


>emb|CCH85655.1| protein of unknown function [Modestobacter marinus]
          Length = 105

 Score = 56.6 bits (135), Expect(2) = 4e-13
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -3

Query: 282 RKGPAFVGCSSGERVSNT*VTCP*LWDNFRKLGLIPDRSSCCMV 151
           R  P+F GC SGERVSNT  TCP LWDN +KL LIPD ++  MV
Sbjct: 33  RARPSFGGCPSGERVSNTWATCPQLWDNSKKLVLIPDVTADRMV 76



 Score = 43.5 bits (101), Expect(2) = 4e-13
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -2

Query: 145 WKVSAVGDGLAAYQLVGGVVAYQGFDG 65
           WK S+  DG AAYQLVGGV+AYQG DG
Sbjct: 79  WKDSSAEDGPAAYQLVGGVMAYQGDDG 105


>ref|WP_016520404.1| hypothetical protein, partial [Treponema socranskii]
           gi|513480706|gb|EPF26580.1| hypothetical protein
           HMPREF1221_00764, partial [Treponema socranskii subsp.
           paredis ATCC 35535]
          Length = 235

 Score = 62.4 bits (150), Expect(2) = 1e-11
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIP--NRRNFPTPTMQQELLS 175
           SRRSLGRISVPM P  LSGR+PV A    YP  +L+ R  IP  +R +FP   + Q ++ 
Sbjct: 138 SRRSLGRISVPMCPSALSGRIPVLATAGRYPAVQLMGRRPIPLRSRSSFPAVYLSQTVIY 197

Query: 176 GISPS 190
            +SPS
Sbjct: 198 PVSPS 202



 Score = 32.3 bits (72), Expect(2) = 1e-11
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 171 YPVLAPVS*SYPKVKGRLLTCYSPVRHS 254
           YPV   +S   P  +G L TCYSPVR S
Sbjct: 197 YPVSPSISTGCPGQRGTLSTCYSPVRRS 224


>ref|WP_004846360.1| hypothetical protein [[Ruminococcus] torques]
           gi|145846017|gb|EDK22935.1| hypothetical protein
           RUMTOR_02906 [Ruminococcus torques ATCC 27756]
          Length = 103

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 41/53 (77%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQ 160
           SRRSLGR+SVPMWPVTLSGRL + ALVS Y TN+LI R SI   R+F   TM+
Sbjct: 44  SRRSLGRVSVPMWPVTLSGRLLIVALVSRYLTNQLIRRGSISYHRSFYPRTMR 96


>ref|WP_005362050.1| hypothetical protein [Eubacterium ventriosum]
           gi|149735898|gb|EDM51784.1| hypothetical protein
           EUBVEN_00788 [Eubacterium ventriosum ATCC 27560]
          Length = 92

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/53 (62%), Positives = 39/53 (73%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTMQ 160
           SRRSLGR+SVPMWP+TLS RL + ALV  Y TN+LI R SI   R+F   TM+
Sbjct: 33  SRRSLGRVSVPMWPITLSSRLLIVALVGRYLTNQLIRRGSILYHRSFSHRTMR 85


>ref|WP_009067872.1| conserved hypothetical protein, partial [Streptomyces sp. SPB78]
           gi|302429949|gb|EFL01765.1| conserved hypothetical
           protein [Streptomyces sp. SPB78]
          Length = 69

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +1

Query: 49  PLRPATRQSLGKPLPHQQADKPRVHPQPPKLSNPHHAAGAPIRY*PQFPEVIPKSRA 219
           PLRPATR+ LG+PLPHQ AD+PR HP PP+LS    A G+      ++P + P SRA
Sbjct: 2   PLRPATRRRLGEPLPHQLADRPRAHPAPPELSTAKDAQGS------EYPVLDPVSRA 52


>ref|WP_009188947.1| hypothetical protein [Streptomyces sp. e14]
           gi|292833025|gb|EFF91374.1| hypothetical protein
           SSTG_01693 [Streptomyces sp. e14]
           gi|292833486|gb|EFF91835.1| hypothetical protein
           SSTG_02154 [Streptomyces sp. e14]
           gi|292834017|gb|EFF92366.1| hypothetical protein
           SSTG_02685 [Streptomyces sp. e14]
          Length = 55

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/55 (61%), Positives = 38/55 (69%)
 Frame = -2

Query: 229 VSNLPLTLG*LQETGANTG*ELLLHGGGWKVSAVGDGLAAYQLVGGVVAYQGFDG 65
           + NLP TLG   ETG+NTG E   H GGWK  AV D  AAYQLVG V+A+QG DG
Sbjct: 1   MGNLPFTLGQALETGSNTGYEPPRHLGGWKAPAVKDEPAAYQLVGEVMAHQGDDG 55


>ref|WP_009713210.1| hypothetical protein, partial [Streptomyces himastatinicus]
           gi|302458295|gb|EFL21388.1| LOW QUALITY PROTEIN:
           hypothetical protein SSOG_01100 [Streptomyces
           himastatinicus ATCC 53653] gi|302459722|gb|EFL22815.1|
           LOW QUALITY PROTEIN: hypothetical protein SSOG_02529
           [Streptomyces himastatinicus ATCC 53653]
           gi|302464108|gb|EFL27201.1| LOW QUALITY PROTEIN:
           hypothetical protein SSOG_06915 [Streptomyces
           himastatinicus ATCC 53653]
          Length = 61

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +2

Query: 140 FPTPTMQQELLSGISPSFLKLSQSQGQVTHVLLTRSPLEHPTKAGPFRSTCMC 298
           F   TM+  ++SGI P F  LSQS+GQ+ HVLLTRSPL HP   G  RSTCMC
Sbjct: 11  FHHQTMRPVIISGIRPRFQGLSQSEGQIAHVLLTRSPLIHP--EGLHRSTCMC 61


>ref|WP_021554219.1| hypothetical protein, partial [Escherichia coli]
           gi|535498309|gb|EQW37646.1| hypothetical protein
           G903_04242, partial [Escherichia coli UMEA 3053-1]
          Length = 146

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +2

Query: 2   SRRSLGRISVPMWPVTLSGRLPVKALVSHYPTNKLISRESIPNRRNFPTPTM---QQELL 172
           SRRSL R+SVP+W V LS +L + ALVS YPTNKLI    I  +    +P++   +  +L
Sbjct: 37  SRRSLDRVSVPVWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEALRSPSLVLRRYAVL 96

Query: 173 SGISPSFLKLSQSQGQVTHVLLTR 244
           + +S S+   S S   +TH   TR
Sbjct: 97  ATVSSSYPPPSGSFPDITHPSATR 120