BLASTX nr result
ID: Rheum21_contig00029636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029636
(492 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 128 5e-38
ref|XP_006404174.1| hypothetical protein EUTSA_v10010962mg, part... 100 3e-19
ref|XP_006414325.1| hypothetical protein EUTSA_v10027475mg [Eutr... 99 4e-19
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 70 1e-17
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 70 1e-17
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 70 1e-17
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 69 2e-17
ref|XP_006409579.1| hypothetical protein EUTSA_v10022990mg [Eutr... 92 7e-17
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 61 5e-15
ref|XP_006403332.1| hypothetical protein EUTSA_v10003415mg [Eutr... 86 5e-15
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 72 1e-14
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 69 4e-14
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera] 69 4e-14
ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2... 68 1e-13
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera] 67 2e-13
emb|CAN77568.1| hypothetical protein VITISV_010611 [Vitis vinifera] 65 6e-13
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 64 9e-13
gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indi... 66 1e-12
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 63 2e-12
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group] 63 2e-12
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 128 bits (322), Expect(2) = 5e-38
Identities = 69/132 (52%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKE-TPNSSTVNMMEEG 178
DKLPPSWK F+ MLKHKKE +SLV+LGSHLRIEE LR QE GK K+ +S++NMM+E
Sbjct: 107 DKLPPSWKGFRRMLKHKKEELSLVQLGSHLRIEESLRVQEGGKPKDKEAETSSINMMKES 166
Query: 179 SHXXXXXXXXXRPH-NNTNTGPNKKPSQKGCWNRGKPGHLRKDCWTGKGKKGNVPNQSAQ 355
RP NNTN G NK+ + CW KPGH ++DC K K + Q
Sbjct: 167 GSSKMKNKGKKRPFTNNTNDGSNKR-FKSVCWICNKPGHFKRDCRAAKDKNKMQQKRFGQ 225
Query: 356 GSKDQGQKSHQG 391
GSKDQ SHQG
Sbjct: 226 GSKDQDPSSHQG 237
Score = 55.1 bits (131), Expect(2) = 5e-38
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 384 IKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDGRV 491
++DDE+AWW+DSGAT HVC+D+ FK + + DG V
Sbjct: 260 VQDDEVAWWIDSGATIHVCKDRGWFKTYEPVQDGSV 295
>ref|XP_006404174.1| hypothetical protein EUTSA_v10010962mg, partial [Eutrema
salsugineum] gi|557105293|gb|ESQ45627.1| hypothetical
protein EUTSA_v10010962mg, partial [Eutrema salsugineum]
Length = 281
Score = 99.8 bits (247), Expect = 3e-19
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
DKLPPSWK+FKHMLKHKKE +SLV+LGSHLRIEE LR+QE GK + +S++NMMEE
Sbjct: 148 DKLPPSWKDFKHMLKHKKEELSLVQLGSHLRIEESLRAQEGGKPNKEVGTSSINMMEESG 207
Query: 182 HXXXXXXXXXRPHNNTNTGPNKK-PSQKGCWNRGKPGHLRKD 304
+ +NNT G NK+ S G + G ++ KD
Sbjct: 208 NSKKNKGKKRSFNNNTYGGSNKRLKSVVGFIDSGATTYVCKD 249
>ref|XP_006414325.1| hypothetical protein EUTSA_v10027475mg [Eutrema salsugineum]
gi|557115495|gb|ESQ55778.1| hypothetical protein
EUTSA_v10027475mg [Eutrema salsugineum]
Length = 260
Score = 99.4 bits (246), Expect = 4e-19
Identities = 49/83 (59%), Positives = 59/83 (71%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
DKLPPSWK+FKHMLKHKKE +SLV+LGSHLRIEE LR+QE GK K+ +S++NMMEE
Sbjct: 146 DKLPPSWKDFKHMLKHKKEELSLVQLGSHLRIEESLRAQEGGKPKKEVGTSSINMMEESG 205
Query: 182 HXXXXXXXXXRPHNNTNTGPNKK 250
+N TN G NK+
Sbjct: 206 GSKKHKGKKRFLNNITNGGSNKR 228
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 69.7 bits (169), Expect(2) = 1e-17
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
+KLPP+WK+FK+ LKHK++ +S+ +L LRIEE R EK K T N + N +E G
Sbjct: 190 EKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK-KGAHTLNEAKANFVEHGQ 248
Query: 182 HXXXXXXXXXRPHNNTNTGP--------NKKPSQKG-CWNRGKPGHLRKDCWTGKGKKGN 334
+ +NN G +KKP +G C+N GK GH DC K K
Sbjct: 249 ------SSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK 302
Query: 335 VPN 343
N
Sbjct: 303 EAN 305
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 378 NLIKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDG 485
NL+ + WW+D+GAT HVC DK MF F +++G
Sbjct: 327 NLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENG 362
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 69.7 bits (169), Expect(2) = 1e-17
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
+KLPP+WK+FK+ LKHK++ +S+ +L LRIEE R EK K T N + N +E G
Sbjct: 190 EKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK-KGAHTLNEAQANFVEHGQ 248
Query: 182 HXXXXXXXXXRPHNNTNTGP--------NKKPSQKG-CWNRGKPGHLRKDCWTGKGKKGN 334
+ +NN G +KKP +G C+N GK GH DC K K
Sbjct: 249 ------SSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK 302
Query: 335 VPN 343
N
Sbjct: 303 EAN 305
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 378 NLIKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDG 485
NL+ + WW+D+GAT HVC DK MF F +++G
Sbjct: 327 NLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENG 362
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 69.7 bits (169), Expect(2) = 1e-17
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
+KLPP+WK+FK+ LKHK++ +S+ +L LRIEE R EK K T N + N +E G
Sbjct: 190 EKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK-KGAHTLNEAKANFVEHGQ 248
Query: 182 HXXXXXXXXXRPHNNTNTGP--------NKKPSQKG-CWNRGKPGHLRKDCWTGKGKKGN 334
+ +NN G +KKP +G C+N GK GH DC K K
Sbjct: 249 ------SSNAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK 302
Query: 335 VPN 343
N
Sbjct: 303 EAN 305
Score = 45.4 bits (106), Expect(2) = 1e-17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 378 NLIKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDG 485
NL+ + WW+D+GAT HVC DK MF F +++G
Sbjct: 327 NLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENG 362
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 69.3 bits (168), Expect(2) = 2e-17
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
+KLPP+WK+FK+ LKHK++ +S+ +L LRIEE R EK K T N + N +E G
Sbjct: 190 EKLPPAWKDFKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEK-KGVHTLNEAKANFVEHGQ 248
Query: 182 HXXXXXXXXXRPHNNTNTGP--------NKKPSQKG-CWNRGKPGHLRKDCWTGKGKKGN 334
+ +NN G +KKP +G C+N GK GH DC K K
Sbjct: 249 ------SSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK 302
Query: 335 VPN 343
N
Sbjct: 303 EAN 305
Score = 45.4 bits (106), Expect(2) = 2e-17
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 378 NLIKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDG 485
NL+ + WW+D+GAT HVC DK MF F +++G
Sbjct: 327 NLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENG 362
>ref|XP_006409579.1| hypothetical protein EUTSA_v10022990mg [Eutrema salsugineum]
gi|557110741|gb|ESQ51032.1| hypothetical protein
EUTSA_v10022990mg [Eutrema salsugineum]
Length = 234
Score = 92.0 bits (227), Expect = 7e-17
Identities = 50/97 (51%), Positives = 60/97 (61%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
DKLPPSWK+FKHMLK KKE +SLV+LGSH RIEE L +QE GK KE ++S++NMMEE
Sbjct: 127 DKLPPSWKDFKHMLKQKKEKLSLVQLGSHFRIEESLIAQEAGKPKEV-DTSSINMMEESG 185
Query: 182 HXXXXXXXXXRPHNNTNTGPNKKPSQKGCWNRGKPGH 292
+NNT NK+ W K GH
Sbjct: 186 SSKKNKRKKRSFNNNTMMDLNKRVKSVS-WISNKQGH 221
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 60.8 bits (146), Expect(2) = 5e-15
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Frame = +2
Query: 11 PPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSHXX 190
P WK+FK+ LKHK++ +S+ +L LRIEE R EK K T N + N +E G
Sbjct: 114 PLPWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEK-KGAHTLNEAKANFVEHGQ--- 169
Query: 191 XXXXXXXRPHNNTNTGP--------NKKPSQKG-CWNRGKPGHLRKDCWTGKGKKGNVPN 343
+ +NN G +KKP +G C+N GK GH DC K K N
Sbjct: 170 ---SSKAKTNNNKGKGSKLGPKGGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEAN 226
Score = 45.4 bits (106), Expect(2) = 5e-15
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 378 NLIKDDEIAWWVDSGATTHVCRDKSMFKIFVLLDDG 485
NL+ + WW+D+GAT HVC DK MF F +++G
Sbjct: 248 NLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENG 283
>ref|XP_006403332.1| hypothetical protein EUTSA_v10003415mg [Eutrema salsugineum]
gi|557104445|gb|ESQ44785.1| hypothetical protein
EUTSA_v10003415mg [Eutrema salsugineum]
Length = 268
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/112 (41%), Positives = 59/112 (52%)
Frame = +2
Query: 2 DKLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGS 181
DK PPSWK FKHMLKHKKE +SLV+LGSHL++ +S++NMMEE
Sbjct: 114 DKFPPSWKNFKHMLKHKKEELSLVQLGSHLQV----------------GTSSINMMEENG 157
Query: 182 HXXXXXXXXXRPHNNTNTGPNKKPSQKGCWNRGKPGHLRKDCWTGKGKKGNV 337
+ +NNT G NK+ + CW KPGH + W G +V
Sbjct: 158 NSKKNKGKKRSFNNNTYDGSNKR-LKSVCWICNKPGHFKLSWWIDSGATTHV 208
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 72.0 bits (175), Expect(2) = 1e-14
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP +W+ F LKHK++ IS+ L + L +EE R+++ G K S+ NM+++ +
Sbjct: 122 KLPSTWRNFATALKHKRQEISVENLIASLDVEEKARAKDTG-SKGGEGHSSANMVQKNHN 180
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKGCWNRGKPGHLRKDC---WTGKGKKGNVPNQSAQ 355
+P+ TN K ++ C+ G+ GH KDC +GKKGNV A
Sbjct: 181 KGKGKPKSNKPNKTTNFKKKKNKAELTCFACGEAGHFAKDCPDRADRRGKKGNVNTVIAS 240
Query: 356 GSKDQG 373
+D+G
Sbjct: 241 NEEDKG 246
Score = 33.1 bits (74), Expect(2) = 1e-14
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 402 AWWVDSGATTHVCRDKSMFKIF 467
+WW+D+GA HVC D ++F +
Sbjct: 261 SWWLDTGANVHVCSDINLFSSY 282
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 69.3 bits (168), Expect(2) = 4e-14
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP SWK ++ + HK E SL E+ HLRIEE RS++K E+ ++ N + + +H
Sbjct: 168 KLPSSWKGYRKRILHKSEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANH 227
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG----CWNRGKPGHLRKDCWTGKGKKGNVPN 343
+ N + + KG C+ GKPGH ++C K +KG V N
Sbjct: 228 PRGKNNNNKKNSGNYMSPKKNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGAVVN 284
Score = 33.9 bits (76), Expect(2) = 4e-14
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WW D+ AT HV DKS+FK F
Sbjct: 307 WWYDTCATVHVTYDKSLFKTF 327
>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 69.3 bits (168), Expect(2) = 4e-14
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP SWK ++ + HK E SL E+ HLRIEE RS++K E+ ++ N + + +H
Sbjct: 168 KLPSSWKGYRKRILHKSEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAISKANH 227
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG----CWNRGKPGHLRKDCWTGKGKKGNVPN 343
+ N + + KG C+ GKPGH ++C K +KG V N
Sbjct: 228 PRGKNNNNKKNSGNYMSPKKNQEQFKGKKGXCFVCGKPGHYARECRFRKDQKGAVVN 284
Score = 33.9 bits (76), Expect(2) = 4e-14
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WW D+ AT HV DKS+FK F
Sbjct: 307 WWYDTCATVHVTYDKSLFKTF 327
>ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
Length = 1182
Score = 67.8 bits (164), Expect(2) = 1e-13
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP SWK ++ + HK E SL E+ HLRIEE LRS++K E+ ++ N + + +H
Sbjct: 160 KLPSSWKGYRKRILHKSEDYSLEEIQKHLRIEEELRSRDKMAEESNGGTNKANAVSKANH 219
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG----CWNRGKPGHLRKDCWTGKGKKGNVPN 343
R N + + KG C+ GK GH ++C K KG V N
Sbjct: 220 PRGKNNNDKRNSGNYMSPKKNQEQFKGKKGPCFVCGKLGHYARECRYRKDLKGVVVN 276
Score = 33.9 bits (76), Expect(2) = 1e-13
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WW D+ AT HV DKS+FK F
Sbjct: 299 WWYDTCATVHVTYDKSLFKTF 319
>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
Length = 804
Score = 67.4 bits (163), Expect(2) = 2e-13
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP SWK ++ + HK E SL E+ HLRI+E RS++K E+ ++ N + + +H
Sbjct: 168 KLPSSWKGYRKRILHKSEDYSLEEIQKHLRIKEESRSRDKMVEESNGGTNKANAISKANH 227
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG----CWNRGKPGHLRKDCWTGKGKKGNVPN 343
+ N + + KG C+ GKPGH ++C K +KG V N
Sbjct: 228 PRGKNNNNKKNSGNYMSPKKNQEQFKGKKGPCFVCGKPGHYARECRFRKDQKGVVVN 284
Score = 33.9 bits (76), Expect(2) = 2e-13
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WW D+ AT HV DKS+FK F
Sbjct: 307 WWYDTCATVHVTYDKSLFKTF 327
>emb|CAN77568.1| hypothetical protein VITISV_010611 [Vitis vinifera]
Length = 1067
Score = 65.5 bits (158), Expect(2) = 6e-13
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLP SWK ++ + HK E SL E+ HLRIEE RS++K E+ ++ N + + +H
Sbjct: 159 KLPSSWKGYRKRILHKSEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKANAVSKANH 218
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG----CWNRGKPGHLRKDCWTGKGKKGNVPN 343
R N + + KG C+ GK GH ++C K KG V N
Sbjct: 219 PRGKNNXDKRNSGNYMSPKKXQEQFKGKKXPCFVCGKXGHYARECRYRKDLKGVVVN 275
Score = 33.9 bits (76), Expect(2) = 6e-13
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WW D+ AT HV DKS+FK F
Sbjct: 298 WWYDTCATVHVTYDKSLFKTF 318
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 63.9 bits (154), Expect(2) = 9e-13
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQEKGKEKETPNSSTVNMMEEGSH 184
KLPPSW +F LKHK++ S+ +L L IEE R+++ +K SS + ++ H
Sbjct: 123 KLPPSWSDFATSLKHKRQEFSVTDLIGSLGIEEKARAKDNRGKKIEGGSSANLVQKKNPH 182
Query: 185 XXXXXXXXXRPHNNTNTGPNKKPSQKG-----CWNRGKPGHLRKDCWTGKGKK 328
+P N K KG C+ GKPGH KDC K KK
Sbjct: 183 ASHNNNKKVKPDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPERKDKK 235
Score = 34.7 bits (78), Expect(2) = 9e-13
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WWVD+GA HVC D S+F +
Sbjct: 266 WWVDTGANIHVCADISLFSSY 286
>gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indica Group]
Length = 342
Score = 65.9 bits (159), Expect(2) = 1e-12
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQE-KGKEKETPNSSTVNMMEE-- 175
KLPPSW +F LKHK++ S+++L L +EE R+++ GK+ E S+ NM+++
Sbjct: 123 KLPPSWSDFATSLKHKRQEFSVIDLIGSLGVEEKARAKDIWGKKVE--GGSSANMVQKKN 180
Query: 176 --GSHXXXXXXXXXRPHNNTNTGPNKKPSQKG-CWNRGKPGHLRKDCWTGKGKK 328
SH +P TN K KG C+ GKPGH KDC K +K
Sbjct: 181 PHASHNNKKVKHDVKPKATTNFKKKGKGKAKGDCFVCGKPGHWAKDCPEHKDRK 234
Score = 32.3 bits (72), Expect(2) = 1e-12
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WWVD+GA HVC D +F +
Sbjct: 265 WWVDTGANIHVCADIFLFSSY 285
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQE-KGKEKETPNSSTVNMMEE-- 175
KLPPSW +F LKHK++ S+ +L L +EE R+++ +GK+ E S+ NM+++
Sbjct: 334 KLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARAKDVRGKKVE--GGSSANMVQKKN 391
Query: 176 --GSHXXXXXXXXXRPHNNTNTGPNKKPSQKG-CWNRGKPGHLRKDCWTGKGKK 328
SH +P TN K KG C+ GK GH KDC K +K
Sbjct: 392 PHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRK 445
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WWVD+GA HVC D S+F +
Sbjct: 476 WWVDTGANIHVCADISLFSSY 496
>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Frame = +2
Query: 5 KLPPSWKEFKHMLKHKKEGISLVELGSHLRIEEGLRSQE-KGKEKETPNSSTVNMMEE-- 175
KLPPSW +F LKHK++ S+ +L L +EE R+++ +GK+ E S+ NM+++
Sbjct: 268 KLPPSWSDFATSLKHKRQEFSVPDLIGSLGVEEKARAKDVRGKKVE--GGSSANMVQKKN 325
Query: 176 --GSHXXXXXXXXXRPHNNTNTGPNKKPSQKG-CWNRGKPGHLRKDCWTGKGKK 328
SH +P TN K KG C+ GK GH KDC K +K
Sbjct: 326 PHASHNNKKVKPDVKPKAATNFKKKSKGKAKGDCFVCGKSGHWAKDCPERKDRK 379
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 405 WWVDSGATTHVCRDKSMFKIF 467
WWVD+GA HVC D S+F +
Sbjct: 410 WWVDTGANIHVCADISLFSSY 430