BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029612
         (210 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]      66   5e-09
gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subc...    66   5e-09
ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266...    65   7e-09
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]      65   9e-09
emb|CAN84015.1| hypothetical protein VITISV_017117 [Vitis vinifera]    65   9e-09
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc...    65   9e-09
emb|CAN82347.1| hypothetical protein VITISV_040746 [Vitis vinifera]    65   1e-08
gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Grou...    64   2e-08
emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]    64   2e-08
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]    64   2e-08
emb|CAN67780.1| hypothetical protein VITISV_006406 [Vitis vinifera]    64   2e-08
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]    64   2e-08
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]    64   2e-08
emb|CAN59787.1| hypothetical protein VITISV_042166 [Vitis vinifera]    64   2e-08
emb|CAN63776.1| hypothetical protein VITISV_043744 [Vitis vinifera]    64   2e-08
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]      64   3e-08
gb|ABA93936.1| retrotransposon protein, putative, unclassified, ...    63   4e-08
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]          63   4e-08
emb|CAN81293.1| hypothetical protein VITISV_003262 [Vitis vinifera]    63   4e-08
emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]    63   4e-08

>gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1128

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
 Frame = -3

Query: 187  VCSFDTILIMCNV----YRT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNR 20
            +C+ D+ + + N     +RT HI+IRHHFL+DHV K +I++ H RTEDQ+ADIFTK L+ 
Sbjct: 1050 LCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDHVAKCDIVISHIRTEDQLADIFTKPLDE 1109

Query: 19   EPF 11
              F
Sbjct: 1110 TRF 1112


>gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1115

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
 Frame = -3

Query: 187  VCSFDTILIMCNV----YRT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNR 20
            +C+ D+ + + N     +RT HI+IRHHFL+DHV K +I++ H RTEDQ+ADIFTK L+ 
Sbjct: 1037 LCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDHVAKCDIVISHIRTEDQLADIFTKPLDE 1096

Query: 19   EPF 11
              F
Sbjct: 1097 TRF 1099


>ref|XP_004237308.1| PREDICTED: uncharacterized protein LOC101266020 [Solanum
           lycopersicum]
          Length = 771

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/43 (65%), Positives = 38/43 (88%)
 Frame = -3

Query: 136 HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFE 8
           HI++RHHFL  +VEKGNI+L +C TE+QIAD+FTKAL+++ FE
Sbjct: 717 HIDVRHHFLRYNVEKGNIVLTYCPTEEQIADMFTKALSKDQFE 759


>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1584

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
            RT HI+IRHHFL DHV K +I++ H RTEDQ+ADIFTK LN   F
Sbjct: 1524 RTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRF 1568


>emb|CAN84015.1| hypothetical protein VITISV_017117 [Vitis vinifera]
          Length = 1007

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 13/70 (18%)
 Frame = -3

Query: 181 SFDTILIMCNV-------------YRT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADI 41
           SF+ + I CN              YRT HI IRHHFL DH +KG+I L+   T+DQ+ADI
Sbjct: 779 SFEHVPIKCNNVSAINISKNPVQHYRTKHIEIRHHFLRDHAQKGDITLDFVSTKDQLADI 838

Query: 40  FTKALNREPF 11
           FTK L+ E F
Sbjct: 839 FTKPLSEEQF 848


>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2112

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
            RT HI+IRHHFL DHV K +I++ H RTEDQ+ADIFTK LN   F
Sbjct: 1524 RTKHIDIRHHFLRDHVTKCDIVISHIRTEDQLADIFTKPLNETRF 1568


>emb|CAN82347.1| hypothetical protein VITISV_040746 [Vitis vinifera]
          Length = 334

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -3

Query: 148 YRT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
           +RT HI+IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F
Sbjct: 277 FRTKHIDIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQF 322


>gb|AAN05371.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431391|gb|AAP53179.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1299

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
            RT HI+IRHHFL DHV K +I++ H RTEDQ+ADIFTK L+   F
Sbjct: 1239 RTKHIDIRHHFLRDHVVKSDIVISHIRTEDQLADIFTKPLDETRF 1283


>emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]
          Length = 857

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
           RT H+ IRHHFL DH +KG+I LE   T+DQ+ADIFTK LN E F
Sbjct: 387 RTKHMEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLNEEQF 431


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
            RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F  +
Sbjct: 1382 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSDI 1429


>emb|CAN67780.1| hypothetical protein VITISV_006406 [Vitis vinifera]
          Length = 334

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
           RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F  +
Sbjct: 278 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSDI 325


>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
          Length = 334

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
           RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F  +
Sbjct: 278 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSDI 325


>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
          Length = 1409

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
            RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK+L+ E F
Sbjct: 1353 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKSLSEEQF 1397


>emb|CAN59787.1| hypothetical protein VITISV_042166 [Vitis vinifera]
          Length = 334

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
           RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F  +
Sbjct: 278 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQFSDI 325


>emb|CAN63776.1| hypothetical protein VITISV_043744 [Vitis vinifera]
          Length = 215

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
           RT HI IRHHFL DH +KG+I LE   T+DQ ADIFTK+L+ E F ++
Sbjct: 159 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQXADIFTKSLSEEQFSNI 206


>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1411

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPFESL 2
            RT HI+IRHHFL DHV K +I++ H RTEDQ+ADIFTK L+   F  L
Sbjct: 1351 RTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETCFYKL 1398


>gb|ABA93936.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1533

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
 Frame = -3

Query: 187  VCSFDTILIMCNVY----RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNR 20
            +C  + ++ + N +    RT HI+IRHHFL DH  KG+I L H RTE Q+ADIFTK L+ 
Sbjct: 1455 LCDNENVIKIANNHVQHSRTKHIDIRHHFLRDHETKGDICLTHVRTESQLADIFTKPLDE 1514

Query: 19   EPF 11
            + F
Sbjct: 1515 KRF 1517


>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]
          Length = 1539

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -3

Query: 145  RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
            RT HI+IRHHFL DHV K +I++ H RTEDQ+ADIFTK L+   F
Sbjct: 1479 RTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRF 1523


>emb|CAN81293.1| hypothetical protein VITISV_003262 [Vitis vinifera]
          Length = 620

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
           RT HI IRHHFL DH +KG+I LE   T+DQ+ADIFTK L+ E F
Sbjct: 260 RTKHIEIRHHFLRDHAQKGDITLEFVSTKDQLADIFTKPLSEEQF 304


>emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]
          Length = 334

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 145 RT*HINIRHHFLSDHVEKGNIMLEHCRTEDQIADIFTKALNREPF 11
           RT HI IRHHFL DH +KGNI LE   T+DQ+A+IFTK L+ E F
Sbjct: 278 RTKHIEIRHHFLRDHAQKGNITLEFVSTKDQLANIFTKPLSEEQF 322