BLASTX nr result
ID: Rheum21_contig00029380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029380
(216 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis] 84 1e-14
ref|XP_006472002.1| PREDICTED: DNA excision repair protein ERCC-... 84 1e-14
ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-... 84 1e-14
ref|XP_006433266.1| hypothetical protein CICLE_v10002028mg [Citr... 84 1e-14
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-... 81 1e-13
gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe... 81 2e-13
ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-... 79 5e-13
ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citr... 79 5e-13
ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citr... 78 1e-12
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-... 75 1e-11
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|5... 72 8e-11
gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, pa... 72 1e-10
gb|EOY11411.1| DNA excision repair protein ERCC-1 isoform 3 [The... 72 1e-10
gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [The... 72 1e-10
gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [The... 72 1e-10
ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arab... 71 1e-10
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-... 71 2e-10
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-... 71 2e-10
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,... 68 1e-09
ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-... 67 3e-09
>gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]
Length = 407
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSEEGK---SPNKRKKEEPQLTV 44
LYD+FHEPFKRVVP PA PE +Q+N E+ S+ ++E K +KR+K+EPQLTV
Sbjct: 305 LYDSFHEPFKRVVPSYPAVPETSTQNNAEVGSANEDKEAKEEKDREKESKRRKKEPQLTV 364
Query: 43 KSALSAAFAKYTKK 2
KSALSAAF+KY K
Sbjct: 365 KSALSAAFSKYADK 378
>ref|XP_006472002.1| PREDICTED: DNA excision repair protein ERCC-1-like isoform X2
[Citrus sinensis] gi|568835926|ref|XP_006472003.1|
PREDICTED: DNA excision repair protein ERCC-1-like
isoform X3 [Citrus sinensis]
Length = 269
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P PE PSQ +VE +S + V ++ + NKR+K+EP+LTVKS
Sbjct: 167 LYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELTVKS 226
Query: 37 ALSAAFAKYTKK 2
ALSAAFAKY K
Sbjct: 227 ALSAAFAKYADK 238
>ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-1-like isoform X1
[Citrus sinensis]
Length = 335
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P PE PSQ +VE +S + V ++ + NKR+K+EP+LTVKS
Sbjct: 233 LYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELTVKS 292
Query: 37 ALSAAFAKYTKK 2
ALSAAFAKY K
Sbjct: 293 ALSAAFAKYADK 304
>ref|XP_006433266.1| hypothetical protein CICLE_v10002028mg [Citrus clementina]
gi|557535388|gb|ESR46506.1| hypothetical protein
CICLE_v10002028mg [Citrus clementina]
Length = 295
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P PE PSQ +VE +S + V ++ + NKR+K+EP+LTVKS
Sbjct: 209 LYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELTVKS 268
Query: 37 ALSAAFAKYTKK 2
ALSAAFAKY K
Sbjct: 269 ALSAAFAKYADK 280
>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
gi|296088298|emb|CBI36743.3| unnamed protein product
[Vitis vinifera]
Length = 398
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVVP PA PE P +N E +S + V + + +KR+K+EP+LTVKS
Sbjct: 292 LYDTFHEPFKRVVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKS 351
Query: 37 ALSAAFAKYTKK 2
ALSAAFA+Y++K
Sbjct: 352 ALSAAFAQYSEK 363
>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
Length = 398
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV RPA PE + SN E S +EE + +KR+K+EP+LTVKS
Sbjct: 300 LYDTFHEPFKRVVASRPAVPETSAPSNAEPGSVDEEDKEAEETEDESKRRKKEPELTVKS 359
Query: 37 ALSAAFAKYTKK 2
ALS AF+KY K
Sbjct: 360 ALSVAFSKYADK 371
>ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-1-like [Citrus
sinensis]
Length = 394
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P PE PSQ +VE +S + V ++ + NKR+K+E + TVKS
Sbjct: 292 LYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTVKS 351
Query: 37 ALSAAFAKYTKK 2
ALSAAFAKY K
Sbjct: 352 ALSAAFAKYADK 363
>ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citrus clementina]
gi|557535385|gb|ESR46503.1| hypothetical protein
CICLE_v10001229mg [Citrus clementina]
Length = 430
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P PE PSQ +VE +S + V ++ + NKR+K+E + TVKS
Sbjct: 328 LYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTVKS 387
Query: 37 ALSAAFAKYTKK 2
ALSAAFAKY K
Sbjct: 388 ALSAAFAKYADK 399
>ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citrus clementina]
gi|557535386|gb|ESR46504.1| hypothetical protein
CICLE_v10003460mg [Citrus clementina]
Length = 199
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = -3
Query: 211 YDTFHEPFKRVVPLRPAAPEAPSQSNVELAS-SARPPVSEEGKSPNKRKKEEPQLTVKSA 35
YDTFHEPFK VV P PE PSQ +VE +S + V ++ + NKR+K+E +LTVKSA
Sbjct: 118 YDTFHEPFKHVVSSHPPIPETPSQKDVEPSSVNEVTEVEKDAEDVNKRRKKELELTVKSA 177
Query: 34 LSAAFAKYTKK 2
LSAAFAKY K
Sbjct: 178 LSAAFAKYADK 188
>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
subsp. vesca]
Length = 380
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSEEGKSPNKRKKEEPQLTVKSA 35
LYDTFHEPFKRVV RPA E+ N E S +++ K +K +K+EP+ TVKSA
Sbjct: 287 LYDTFHEPFKRVVASRPAVSESSPPDNAEPCSVTEDKETKDTKEESKCRKKEPEPTVKSA 346
Query: 34 LSAAFAKYTKK 2
LSAAFAKY +
Sbjct: 347 LSAAFAKYADR 357
>ref|XP_002328427.1| predicted protein [Populus trichocarpa]
gi|566169303|ref|XP_006382624.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
gi|550337988|gb|ERP60421.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
Length = 382
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSE-EGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRVV P P+ P Q + E +S E E + NK +K+EP+LTVKS
Sbjct: 281 LYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKS 340
Query: 37 ALSAAFAK 14
ALS+AFAK
Sbjct: 341 ALSSAFAK 348
>gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, partial [Theobroma
cacao]
Length = 298
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSE-EGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRV+ P PE P E S++ +E + + +KR+K+EP++ VKS
Sbjct: 192 LYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKS 251
Query: 37 ALSAAFAKYTKK 2
AL+AAFA+Y K
Sbjct: 252 ALTAAFARYAGK 263
>gb|EOY11411.1| DNA excision repair protein ERCC-1 isoform 3 [Theobroma cacao]
Length = 314
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSE-EGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRV+ P PE P E S++ +E + + +KR+K+EP++ VKS
Sbjct: 208 LYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKS 267
Query: 37 ALSAAFAKYTKK 2
AL+AAFA+Y K
Sbjct: 268 ALTAAFARYAGK 279
>gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [Theobroma cacao]
Length = 398
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSE-EGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRV+ P PE P E S++ +E + + +KR+K+EP++ VKS
Sbjct: 292 LYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKS 351
Query: 37 ALSAAFAKYTKK 2
AL+AAFA+Y K
Sbjct: 352 ALTAAFARYAGK 363
>gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao]
Length = 409
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSE-EGKSPNKRKKEEPQLTVKS 38
LYDTFHEPFKRV+ P PE P E S++ +E + + +KR+K+EP++ VKS
Sbjct: 303 LYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMNVKS 362
Query: 37 ALSAAFAKYTKK 2
AL+AAFA+Y K
Sbjct: 363 ALTAAFARYAGK 374
>ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
lyrata] gi|297328243|gb|EFH58662.1| hypothetical protein
ARALYDRAFT_477808 [Arabidopsis lyrata subsp. lyrata]
Length = 407
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Frame = -3
Query: 214 LYDTFHEPFKRVVP-----LRPAAPEAPSQSNVELASSARPPVSEEG--KSPNKRKKEEP 56
LYDTFHEPFKR + P PEAP Q NV SS P V +E + KRKK+EP
Sbjct: 309 LYDTFHEPFKRATSSYPSVVEPTIPEAPVQKNV---SSKEPVVEDEDFVEDSRKRKKKEP 365
Query: 55 QLTVKSALSAAFAKYTKK 2
+ TVK+ALSA FA+Y+ K
Sbjct: 366 EKTVKTALSAVFARYSDK 383
>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
sativus]
Length = 412
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSEEGK---SPNKRKKEEPQLTV 44
LYDTFHEPFKRVV PA PE P+Q + + SS +GK + K+EP+L V
Sbjct: 296 LYDTFHEPFKRVVSTHPAVPETPTQISTKPRSS-NEEQDVDGKRIEEDGSQHKKEPKLNV 354
Query: 43 KSALSAAFAKYTKK 2
KSALSAAFAKY K
Sbjct: 355 KSALSAAFAKYADK 368
>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
sativus]
Length = 391
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSEEGK---SPNKRKKEEPQLTV 44
LYDTFHEPFKRVV PA PE P+Q + + SS +GK + K+EP+L V
Sbjct: 297 LYDTFHEPFKRVVSTHPAVPETPTQISTKPRSS-NEEQDVDGKRIEEDGSQHKKEPKLNV 355
Query: 43 KSALSAAFAKYTKK 2
KSALSAAFAKY K
Sbjct: 356 KSALSAAFAKYADK 369
>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
communis] gi|223548305|gb|EEF49796.1| excision repair
cross-complementing 1 ercc1, putative [Ricinus communis]
Length = 392
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = -3
Query: 214 LYDTFHEPFKRVVPLRPAAPEAPSQSNVELASSARPPVSEEGK---SPNKRKKEEPQLTV 44
LYDTFHEPFKRVV PA PE SQ + E A V+E GK +K +K+EP+LTV
Sbjct: 287 LYDTFHEPFKRVVSSHPAVPET-SQKDSEPA--LVDEVTEVGKGEYDESKWRKKEPELTV 343
Query: 43 KSALSAAFAKY 11
KSALSAAF+KY
Sbjct: 344 KSALSAAFSKY 354
>ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
Length = 393
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 11/80 (13%)
Frame = -3
Query: 214 LYDTFHEPFKRV-----------VPLRPAAPEAPSQSNVELASSARPPVSEEGKSPNKRK 68
L+DTFHEPFKRV V +PA+PE+ ++ E +SS E+ + +KR+
Sbjct: 287 LFDTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAE-SSSLIEDKQEDTEDVSKRR 345
Query: 67 KEEPQLTVKSALSAAFAKYT 8
K+EP++TVKSALSAAFAKY+
Sbjct: 346 KKEPEVTVKSALSAAFAKYS 365