BLASTX nr result
ID: Rheum21_contig00029330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029330
(676 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [... 80 6e-13
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245... 77 5e-12
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera] 75 2e-11
emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera] 75 2e-11
emb|CBI34887.3| unnamed protein product [Vitis vinifera] 70 8e-10
ref|XP_006470278.1| PREDICTED: probable ATP-dependent DNA helica... 69 1e-09
gb|EOY02467.1| ATP binding,ATP-dependent helicases,DNA helicases... 67 4e-09
gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus n... 66 9e-09
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251... 66 1e-08
ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581... 64 6e-08
ref|XP_006446556.1| hypothetical protein CICLE_v10017496mg, part... 63 7e-08
ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Popu... 63 7e-08
ref|XP_006599800.1| PREDICTED: probable ATP-dependent DNA helica... 63 9e-08
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 60 8e-07
>gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [Prunus persica]
Length = 1214
Score = 80.1 bits (196), Expect = 6e-13
Identities = 62/169 (36%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+II TVFDHIR+KAKNFP +AA SPS E L L RKR RE Q PH+ V+ +
Sbjct: 943 CKIITQQTVFDHIREKAKNFPVLAASNAVCSPSSERLVLTRKRAREKQLEPHNEVEVLEE 1002
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNGS 429
+ +K P +V+ SE+ + +Q++ NL+D+
Sbjct: 1003 LEWNKIPRWAVVNPSSESKETEQNQH--------------------NLMDE------RAG 1036
Query: 430 LPLVVANTEEPKESG--TLFDHVRKKFKKPPVALNSKPKHPGSSSASKE 570
LPL + K SG T+F+H+R K K PV SK GS + +KE
Sbjct: 1037 LPLEPGDGAF-KTSGEETIFEHIRTKAKNFPVINKSKVVESGSLTKTKE 1084
>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 77.0 bits (188), Expect = 5e-12
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+II TVF+HIRKK+K+F + + SPS E L L RKR E Q H + + +
Sbjct: 1677 CKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELH-VTEALEE 1735
Query: 250 KDRSKKPDHEIVS--LVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSN 423
+RSK P +VS L S +++ T Y+P + SL ++N +DD
Sbjct: 1736 TERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQP--ATGSLVVMNFMDD------R 1787
Query: 424 GSLPLVVANTEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSSASKEPDHLSADQFDF 603
LP +T + T+FDH+R+K K + +K + P S S +H S +Q
Sbjct: 1788 ADLPERTESTSQIVTENTIFDHIRRKAKN--FLVFNKSETPESDSTILTKEHFSENQ--- 1842
Query: 604 SIIPDYTTDASHASNNTPQNNTII 675
++ + + D +N++ T +
Sbjct: 1843 PVLHEDSFDTLEGTNSSEALKTTV 1866
>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
Length = 1131
Score = 75.1 bits (183), Expect = 2e-11
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+II TVF+HIRKK+K+F + + SPS E L L RKR E Q H + + +
Sbjct: 824 CKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELH-VTEALEE 882
Query: 250 KDRSKKPDHEIVS--LVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSN 423
+RSK P +VS L S +++ T Y+P + SL ++N +DD
Sbjct: 883 TERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQP--ATGSLVVMNFMDD------R 934
Query: 424 GSLPLVVANTEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSSASKEPDHLSADQ 594
LP T + T+FDH+R+K K V +K + P S S +H S +Q
Sbjct: 935 ADLPERXEXTSQIVXEBTIFDHIRRKAKNFXVF--NKSETPESDSXILTKEHFSENQ 989
>emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera]
Length = 322
Score = 75.1 bits (183), Expect = 2e-11
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+II TVF+HIRKK+K+F + + SPS E L L RKR E Q H + + +
Sbjct: 32 CKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELH-VTEALEE 90
Query: 250 KDRSKKPDHEIVS--LVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSN 423
+RSK P +VS L S +++ T Y+P + SL ++N +DD
Sbjct: 91 TERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQP--ATGSLVVMNFMDD------R 142
Query: 424 GSLPLVVANTEEPKESGTLFDHVRKKFKK-PPVALNSKP 537
LP + T + T+FDH+R+K K P +L ++P
Sbjct: 143 ADLPERIEGTSQIVSEDTIFDHIRRKAKNFPNTSLKNQP 181
>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
Length = 1270
Score = 69.7 bits (169), Expect = 8e-10
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 27/229 (11%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+II TVF+HIRKK+K+F + + SPS E L L RKR E Q H + + +
Sbjct: 932 CKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELH-VTEALEE 990
Query: 250 KDRSKKPDHEIVS--LVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGT---- 411
+RSK P +VS L S +++ T Y+P + SL ++N +DD G
Sbjct: 991 TERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQP--ATGSLVVMNFMDDRGAFLFY 1048
Query: 412 ---------------------SKSNGSLPLVVANTEEPKESGTLFDHVRKKFKKPPVALN 528
LP +T + T+FDH+R+K K +
Sbjct: 1049 FIKCYYYYHYSVLYGVLNHLFVSIQADLPERTESTSQIVTENTIFDHIRRKAKN--FLVF 1106
Query: 529 SKPKHPGSSSASKEPDHLSADQFDFSIIPDYTTDASHASNNTPQNNTII 675
+K + P S S +H S +Q ++ + + D +N++ T +
Sbjct: 1107 NKSETPESDSTILTKEHFSENQ---PVLHEDSFDTLEGTNSSEALKTTV 1152
>ref|XP_006470278.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Citrus
sinensis]
Length = 1228
Score = 68.9 bits (167), Expect = 1e-09
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C++I VF HIR+KA+NFP A + S S E L L RKR E + H + +
Sbjct: 932 CKVITEKKVFQHIREKARNFPISTASNNAHSASSEPLILTRKRFYEQRLQLHDELDVPEE 991
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNGS 429
+ S P +++ S + + + +E + +L +NL+DD T S
Sbjct: 992 TEGSIFPRATLLNPSSGSTEAE-----LKEHGFNSSLTAAGNLGTINLLDDTDTVPSQ-- 1044
Query: 430 LPLVVANTEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSSASKEPDHLSADQFDFSI 609
T + T+F+H+RKK K PV ++ K S SA + +H A+Q +F I
Sbjct: 1045 ---YEECTSKTLTKSTIFEHIRKKSKNFPVFNSNISKTMESDSAIQTNEHFPANQSEFCI 1101
Query: 610 -IPDYTTDAS 636
D T DA+
Sbjct: 1102 AASDVTKDAN 1111
>gb|EOY02467.1| ATP binding,ATP-dependent helicases,DNA helicases [Theobroma cacao]
Length = 1252
Score = 67.4 bits (163), Expect = 4e-09
Identities = 57/193 (29%), Positives = 87/193 (45%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C I G T+FDHIR+KAK+FP + P+ L L RKR R+ QP +
Sbjct: 950 CEITIGHTIFDHIREKAKSFPLLTPSNSAYPPTSGGLILTRKRSRD-QP--------LEE 1000
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNGS 429
+RSK H ++ E+ + +Q+ K S S ++L D+ G S
Sbjct: 1001 MERSKTHQHIVLDPSPESREPEQNVHGINSYMTRKYHINSGSSVTIDLTDESGDLPSEPE 1060
Query: 430 LPLVVANTEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSSASKEPDHLSADQFDFSI 609
+ TEE T+FDH+RKK + PV P S S + ++ + +Q F
Sbjct: 1061 VLSFKTLTEE-----TIFDHIRKKSRNFPVLNTLNPNE--SDSFFRTDEYFAVNQRWFCN 1113
Query: 610 IPDYTTDASHASN 648
T++ S++SN
Sbjct: 1114 ATSRTSNDSNSSN 1126
>gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus notabilis]
Length = 1202
Score = 66.2 bits (160), Expect = 9e-09
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Frame = +1
Query: 73 RIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLR--EMQPGPHSLVKGSL 246
+I +FDHIR+KAK+FP +AA PS ETL L RKR R E++ V +
Sbjct: 913 KITTEQKIFDHIREKAKSFPDLAASSIAYLPSTETLNLARKRTREEELEFLREIEVLEEI 972
Query: 247 DKDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNG 426
+K+RS++ +V ET + D ++ + + + + S NL+++ G S
Sbjct: 973 EKNRSQR-QTLVVKPSVETSEGDPNKQNIKNSPSPQNNITATSSWPFNLMEERGGLSSEA 1031
Query: 427 SLPLVVANTEEPKESGTLFDHVRKKFKKPP 516
+V TEE T+FDH+RKK K P
Sbjct: 1032 EEGMVKTLTEE-----TIFDHIRKKAKDFP 1056
>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
lycopersicum]
Length = 1933
Score = 65.9 bits (159), Expect = 1e-08
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
CRII+ +T+FDHIR+KAKN P + + T+ PS ETL L RKR RE Q + V S +
Sbjct: 1652 CRIINENTIFDHIREKAKNLPALTSLKGTRLPSLETLNLIRKRTREKQLLLENAVGVSEE 1711
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMT-RETAPY 351
R+K P H +V +E ++++R + ++ PY
Sbjct: 1712 LRRTKVPCHNMVIQSAEYIDLEENRPFSNKDQIPY 1746
>ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581133 [Solanum tuberosum]
Length = 1891
Score = 63.5 bits (153), Expect = 6e-08
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
CRII+ +TVFDHIR+KAKN P + + T PS ETL L RKR RE Q + V S +
Sbjct: 1610 CRIINENTVFDHIREKAKNLPALTSLKGTCLPSLETLNLIRKRTREEQLLVENAVGVSEE 1669
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMT-RETAPY 351
R+K P H +V ++ ++++R + ++ PY
Sbjct: 1670 VRRTKVPYHNMVIQSAQYIDLEENRPFSNKDQRPY 1704
>ref|XP_006446556.1| hypothetical protein CICLE_v10017496mg, partial [Citrus clementina]
gi|557549167|gb|ESR59796.1| hypothetical protein
CICLE_v10017496mg, partial [Citrus clementina]
Length = 1314
Score = 63.2 bits (152), Expect = 7e-08
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
CR+I VF HIR+KA+NFP A + S S E L L RK E + H + +
Sbjct: 1000 CRVITEKKVFQHIREKARNFPISTASNNAHSASSEPLILTRKHFYEQRLQLHDELDVPEE 1059
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNGS 429
+ P +++ S + + + +E + +L +NL+DD G S
Sbjct: 1060 TEGGIFPQATLLNPSSGSTEAE-----LKEHGFNSSLTAAGNLGTINLLDDTGAF----S 1110
Query: 430 LPLVVAN-----------------TEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSS 558
LP + N T + T+F+H+RKK K PV ++ K S S
Sbjct: 1111 LPKNLYNYQFFMFEDTVPSQYEECTSKTLTESTIFEHIRKKSKNFPVFNSNISKTMESDS 1170
Query: 559 ASKEPDHLSADQFDFSIIPDYTTDASHASNN 651
A + +H A+Q +F I T+D +N+
Sbjct: 1171 AIQTNEHFLANQSEFCIA---TSDVKKDANS 1198
>ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Populus trichocarpa]
gi|550348915|gb|EEE83331.2| hypothetical protein
POPTR_0001s35040g [Populus trichocarpa]
Length = 1175
Score = 63.2 bits (152), Expect = 7e-08
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLR----EMQPGPHSLVK 237
C+II T+F+HIR+KAKNFP + + + SPS E + L RKR R E+ P+
Sbjct: 868 CKIISEQTIFEHIREKAKNFPLLTSSSNVCSPSSEAMLLTRKRSRDKAIELDSAPN---- 923
Query: 238 GSLDKDRSKKPDHEIVSLVSETGK-----VDQSRTMTRETAPYKPRFISRSLDIVNLVDD 402
+ ++ K ++++ SE G+ D + MT + RF++ +LVDD
Sbjct: 924 -ATEETEGSKISLALLNVTSEQGERERYGHDSYKLMTPKHHTSPGRFVA------DLVDD 976
Query: 403 GGTSKSNGSLPLVVANTEEPKESG----TLFDHVRKK 501
S G LP + +E +G T+FDH+RKK
Sbjct: 977 -----SAGGLP---SKSETSGLNGPTQDTIFDHIRKK 1005
>ref|XP_006599800.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like, partial
[Glycine max]
Length = 1068
Score = 62.8 bits (151), Expect = 9e-08
Identities = 53/157 (33%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Frame = +1
Query: 70 CRIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLREMQPGPHSLVKGSLD 249
C+ I TVFDHIR+KAKNF ++A + PS E L L R RE +P V D
Sbjct: 929 CKSITEKTVFDHIREKAKNFSLLSAYDNIHFPSLEVL-LSRNHAREKRPDHRHEVVVLDD 987
Query: 250 KDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDDGGTSKSNG- 426
+DR + P V+L E K +Q DI ++D T+ S+
Sbjct: 988 EDRPEVPQRNDVNLQVELRKAEQD-------------------DIKFYLNDHCTTGSSNI 1028
Query: 427 -----SLPLVVANTEEPKESGTLFDHVRKKFKK-PPV 519
LP A T E T+FDH+R+K K PP+
Sbjct: 1029 VDTGVFLPEPEAITHEKSTEETVFDHIRRKSKDFPPI 1065
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 59.7 bits (143), Expect = 8e-07
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Frame = +1
Query: 73 RIIDGSTVFDHIRKKAKNFPTVAAPLDTQSPSPETLKLGRKRLRE---MQPGPHSLVKGS 243
+I+ +FDHIR+KAKNFP SPS ET RK E M G ++ +
Sbjct: 1679 KIVSEQEIFDHIREKAKNFPNFTPSRTACSPSLETHLFTRKHRHENDLMLDGKPDAIEVT 1738
Query: 244 LDKDRSKKPDHEIVSLVSETGKVDQSRTMTRETAPYKPRFISRSLDIVNLVDD-GGTSKS 420
+ SK +++L SE +++ + + + +P +RSL +NL+++ GG +
Sbjct: 1739 ---EGSKTSQQTVLNLTSEFREMEHNEHNIKSSPTLQPSTTARSLFTMNLMEEKGGHNMR 1795
Query: 421 NGSLPLVVANTEEPKESGTLFDHVRKKFKKPPVALNSKPKHPGSSSASKEPDHLSADQFD 600
N TEE T+F H+R+K PV K S S + +H + + D
Sbjct: 1796 N--------LTEE-----TIFGHIREKADNFPVLSKIKQ----SESPAWTMEHYAENLPD 1838
Query: 601 FSIIPDYTTDASHASNNTPQNNTII 675
F I + + +N+ II
Sbjct: 1839 FHIGASDALREMKSDDKITRNSIII 1863