BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00029328
         (617 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr...    89   1e-15
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec...    88   2e-15
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec...    82   2e-13
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7...    80   3e-13
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...    77   4e-12
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...    77   4e-12
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe...    76   9e-12
emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]    76   9e-12
gb|AAS80153.1| ACT11D09.9 [Cucumis melo]                               76   9e-12
gb|EXC54202.1| hypothetical protein L484_001390 [Morus notabilis]      74   4e-11
emb|CBI26829.3| unnamed protein product [Vitis vinifera]               74   4e-11
ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Popu...    71   3e-10
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu...    71   3e-10
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul...    71   3e-10
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec...    65   1e-08
ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Caps...    60   5e-07

>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
           gi|557550770|gb|ESR61399.1| hypothetical protein
           CICLE_v10014563mg [Citrus clementina]
          Length = 646

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGD------SSLEESHIA---PKELNLLQVLHSELVNLFPGLNIQDLG 460
           HE+ FAYCCPV + +      +SL  +      P + +L+++L ++L       NIQD G
Sbjct: 525 HEVQFAYCCPVNVDELEKFTTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFG 584

Query: 459 DFLLLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
           + L + S  + VC KD CP+R      D  + AF CC WS+ADD  ARK+IS MEN  L
Sbjct: 585 EHLQVESFHLSVCLKDTCPYRITNGLEDKPRTAFVCCTWSAADDKLARKIISAMENRDL 643


>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Citrus sinensis]
          Length = 1019

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGD------SSLEESHIA---PKELNLLQVLHSELVNLFPGLNIQDLG 460
           HE+ FAYCCPV + +      +SL  +      P + +L+++L ++L       NIQD G
Sbjct: 525 HEVQFAYCCPVNVDELEKFTTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFG 584

Query: 459 DFLLLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
           + L + S  + VC KD CP+R      D  + AF CC WS+ADD  ARK+IS MEN  L
Sbjct: 585 EHLQVESFHLSVCLKDTCPYRITNGLEDKPRTAFFCCTWSAADDKLARKIISAMENRDL 643


>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Fragaria vesca subsp. vesca]
          Length = 1009

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEES-HIAPKELNLLQVLHSELVNLFPGLNIQDLGDFLLLGSL 436
           H++ FAYCCP +IG+S    S  ++    +LLQ+  ++L N     NIQ  GD L L S+
Sbjct: 523 HQVKFAYCCPAHIGNSQENTSLPLSSTNNDLLQLFSAKLANELSEGNIQHFGDHLQLESI 582

Query: 435 RVRVCAKDDCPHR-TDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTLK 280
            V +C+ +DCP+R +D    +  +  F CC W   D+  A K+IS  +  TL+
Sbjct: 583 HVSICSNNDCPYRLSDNGAEEQREPVFFCCSWEMEDEKLAWKVISICQKPTLR 635


>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
           [Theobroma cacao]
          Length = 657

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPK---------ELNLLQVLHSELVNLFPGLNIQDLG 460
           HE+ FAYC P+         S   P          +  L+ +L ++L N     NIQDLG
Sbjct: 529 HEVQFAYCFPMRTERLEKTRSEDLPSADDLLCGLDKCTLISLLSTKLSNELSDGNIQDLG 588

Query: 459 DFLLLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
           + L + S  + +C KD+CPHR   S  +  +V F CC WS AD+  A K+IS M+N TL
Sbjct: 589 EQLQVESFCLSICLKDNCPHRISDSLQNDSEVVFFCCSWSVADEMLAWKIISIMKNYTL 647


>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 3-II-like, partial [Cucumis
           sativus]
          Length = 472

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHI----APKELNLLQVLHSELVNLFPGLNIQDLGDFLLL 445
           HE+ FA+C P+Y G  SL+E H+    + K L L Q L  +L       N+Q+LG++L +
Sbjct: 358 HEVRFAHCRPIYFG--SLDEIHVMDSLSRKSLWLSQ-LSFKLSTELSDRNVQNLGEYLQV 414

Query: 444 GSLRVRVCAKDDCPHRT-DISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
            S+ + +C+K++CP+RT D    +   + FCCC W  AD+  A K+IS +E   L
Sbjct: 415 ESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 469


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHI----APKELNLLQVLHSELVNLFPGLNIQDLGDFLLL 445
           HE+ FA+C P+Y G  SL+E H+    + K L L Q L  +L       N+Q+LG++L +
Sbjct: 535 HEVRFAHCRPIYFG--SLDEIHVMDSLSRKSLWLSQ-LSFKLSTELSDRNVQNLGEYLQV 591

Query: 444 GSLRVRVCAKDDCPHRT-DISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
            S+ + +C+K++CP+RT D    +   + FCCC W  AD+  A K+IS +E   L
Sbjct: 592 ESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 646


>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
          Length = 658

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIG------DSSLEESHIAPKEL--NLLQVLHSELVNLFPGLNIQDLGD 457
           H++ FAYCCP  IG       S+  +  +   E    LL+ L ++L N F   NIQD  D
Sbjct: 533 HQVQFAYCCPADIGHLGETKSSTTNDGQLCKSETCSRLLRQLSAKLSNEFSQGNIQDFED 592

Query: 456 FLLLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
            L + S  V +C K++CP+R         + AF CC W +AD+  A K+IS  +N  +
Sbjct: 593 HLQVESFHVSICLKNNCPYRLMDVQNKSQEAAFFCCSWGTADEKLAWKIISICQNFNV 650


>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
          Length = 328

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIG--------DSSLEESHIAPK-ELNLLQVLHSELVNLFPGLNIQDLG 460
           H++ FAYCCPV IG        D +L ++ ++   E + L  L ++L     G NIQD G
Sbjct: 209 HDVQFAYCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHQLFAKLSTKLGG-NIQDFG 267

Query: 459 DFLLLGSLRVRVCAKDDCPHRTDISCVDPMK--VAFCCCDWSSADDTCARKLISEMENMT 286
             L + S+ + VC KD CP+RT      P K    F CC WS AD   A ++IS MEN+ 
Sbjct: 268 QHLQVDSIHISVCLKDICPYRTTDG---PQKESAVFFCCTWSVADVNLAWEIISIMENLD 324

Query: 285 L 283
           L
Sbjct: 325 L 325


>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
          Length = 708

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHI----APKELNLLQVLHSELVNLFPGLNIQDLGDFLLL 445
           HE+ FA+C P+Y G  SL+E H+    + K L L Q L  +L       N+Q+LG++L +
Sbjct: 594 HEVRFAHCRPIYFG--SLDEIHVMDSLSRKSLWLSQ-LSFKLSTELSDRNVQNLGEYLQV 650

Query: 444 GSLRVRVCAKDDCPHRTDISCV-DPMKVAFCCCDWSSADDTCARKLISEMENMTL 283
            S+ + +C+K++CP+RT      +   + FCCC W  AD+  A K+IS +E   L
Sbjct: 651 ESITLSICSKENCPYRTTNRIENESTAMVFCCCSWLVADEILAWKIISILEKHDL 705


>gb|EXC54202.1| hypothetical protein L484_001390 [Morus notabilis]
          Length = 244

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNLL------QVLHSELVNLFPGLNIQDLGDFL 451
           H +  AYCCP+++ +S   +  +    L +       ++  + L + F   N++D G+ L
Sbjct: 111 HIVQHAYCCPIHVKNSESADHTLVNNVLCITDRCFWHRLFFAVLCDEFSDGNVRDFGEHL 170

Query: 450 LLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEMENMTLKA 277
            + S  + +C+KD CP+R   S  +  +  FCCC WS  D+  A K+IS ++N  L +
Sbjct: 171 QVESFHLSICSKDSCPYRITDSAQNKSESLFCCCTWSVEDEKIAWKIISILKNFDLNS 228


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNLLQVLHSELVNLFPGLNIQDLGDFLLLGSLR 433
           H++ FAYCCP  +  S          E + L +L ++L     G NIQD G  L + S+ 
Sbjct: 585 HDVQFAYCCPNVVSTSD---------ECSWLHLLFAKLATKLGG-NIQDFGQHLQVDSIH 634

Query: 432 VRVCAKDDCPHRTDISCVDPMK--VAFCCCDWSSADDTCARKLISEMENMTL 283
           + VC KD CP+RT      P K    F CC WS AD   A ++IS MEN+ L
Sbjct: 635 ISVCLKDICPYRTTDG---PQKEPAVFFCCTWSVADVNLAWEIISIMENLDL 683


>ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
           gi|550329588|gb|ERP56232.1| hypothetical protein
           POPTR_0010s11650g [Populus trichocarpa]
          Length = 368

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNL------LQVLHSELVNLFPGLNIQDLGDFL 451
           H++ FAYCC   +   +LEE+      L L      LQ+L  EL N F G+NI+DLG+ L
Sbjct: 273 HDVQFAYCCAAQL--DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHL 330

Query: 450 LLGSLRVRVCAKDDCPHR-TDISCVDPMKVAFCC 352
            + S  V VC KD+CP+R  D S  + + V FCC
Sbjct: 331 QVESFHVSVCLKDNCPYRIIDNSQKEAVTVYFCC 364


>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
           gi|550329587|gb|ERP56231.1| hypothetical protein
           POPTR_0010s11650g [Populus trichocarpa]
          Length = 464

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNL------LQVLHSELVNLFPGLNIQDLGDFL 451
           H++ FAYCC   +   +LEE+      L L      LQ+L  EL N F G+NI+DLG+ L
Sbjct: 369 HDVQFAYCCAAQL--DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHL 426

Query: 450 LLGSLRVRVCAKDDCPHR-TDISCVDPMKVAFCC 352
            + S  V VC KD+CP+R  D S  + + V FCC
Sbjct: 427 QVESFHVSVCLKDNCPYRIIDNSQKEAVTVYFCC 460


>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
           gi|550329586|gb|EEF00952.2| metallo-beta-lactamase
           family protein [Populus trichocarpa]
          Length = 625

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNL------LQVLHSELVNLFPGLNIQDLGDFL 451
           H++ FAYCC   +   +LEE+      L L      LQ+L  EL N F G+NI+DLG+ L
Sbjct: 530 HDVQFAYCCAAQL--DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHL 587

Query: 450 LLGSLRVRVCAKDDCPHR-TDISCVDPMKVAFCC 352
            + S  V VC KD+CP+R  D S  + + V FCC
Sbjct: 588 QVESFHVSVCLKDNCPYRIIDNSQKEAVTVYFCC 621


>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Solanum lycopersicum]
          Length = 1043

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGD-------SSLEESHIAPKELNLLQVLHSELVNLFPGLNIQDLGDF 454
           H++  AYCCPV + D       S  E+ H    + +LL +L+++L N F  + I + GD 
Sbjct: 530 HKVQVAYCCPVCVPDEPKNVALSPGEDMHPVLDKCSLLHLLYTKLSNGFQDVTILNDGDR 589

Query: 453 LLLGSLRVRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCA 319
           L + S  V  C K+ CPHR  ++     +    CC WS  D+  A
Sbjct: 590 LQIQSFTVSPCLKEKCPHRIHVNPDSTSEAVNFCCTWSMEDEKLA 634


>ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Capsella rubella]
           gi|482559548|gb|EOA23739.1| hypothetical protein
           CARUB_v10016952mg [Capsella rubella]
          Length = 555

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 32/106 (30%), Positives = 55/106 (51%)
 Frame = -3

Query: 612 HEIHFAYCCPVYIGDSSLEESHIAPKELNLLQVLHSELVNLFPGLNIQDLGDFLLLGSLR 433
           H +  AYCCPV     S         +++L++ L +++  +  G  I +  + L +GS +
Sbjct: 456 HVVCLAYCCPVKAKGES-------DNDVDLIKQLSTKISEIMSGAQIHEAENSLQVGSFK 508

Query: 432 VRVCAKDDCPHRTDISCVDPMKVAFCCCDWSSADDTCARKLISEME 295
             VC K+ C HRT+I  +   +  F CC+WS AD     ++I+ M+
Sbjct: 509 GAVCLKEKCMHRTEI--ISCSEAVFLCCNWSVADLELGWEIINVMK 552