BLASTX nr result
ID: Rheum21_contig00029298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029298
(424 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm... 78 1e-12
ref|XP_002315534.1| predicted protein [Populus trichocarpa] 67 2e-09
gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group] 65 7e-09
ref|XP_002333429.1| predicted protein [Populus trichocarpa] 65 7e-09
ref|XP_002332257.1| predicted protein [Populus trichocarpa] 65 7e-09
ref|XP_002336774.1| predicted protein [Populus trichocarpa] 65 9e-09
ref|XP_002330315.1| predicted protein [Populus trichocarpa] 63 5e-08
gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-07
ref|XP_004234735.1| PREDICTED: enzymatic polyprotein-like [Solan... 60 2e-07
gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativ... 60 4e-07
ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea ma... 58 1e-06
ref|XP_002337925.1| predicted protein [Populus trichocarpa] 58 1e-06
ref|XP_002337260.1| predicted protein [Populus trichocarpa] 58 1e-06
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610... 57 3e-06
ref|XP_002337435.1| predicted protein [Populus trichocarpa] 56 4e-06
gb|ADX31265.1| unknown [Triticum aestivum] 56 6e-06
ref|XP_002337880.1| predicted protein [Populus trichocarpa] 56 6e-06
ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm... 55 1e-05
>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
gi|223549726|gb|EEF51214.1| conserved hypothetical
protein [Ricinus communis]
Length = 208
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = -1
Query: 274 LGLSSTEGSRGTSEQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVE 95
+G S+ E + SF S R PK++ F+G PR W++KCEKYF +++I Q+++
Sbjct: 85 IGQSAAEFGQTNWNSSFGSMGGRIPKVELSHFEGNNPRLWIKKCEKYFQLYSIPNEQKID 144
Query: 94 IAMMYMNDRADVWAQGLLMQKPS 26
IA +Y+ DRAD+W QG Q S
Sbjct: 145 IASLYLGDRADIWYQGWQAQTRS 167
>ref|XP_002315534.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = -1
Query: 271 GLSSTEGSRGTSEQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEI 92
G +S +G RG S P+++F F G+ PRSW+R C KYF + I NQ VEI
Sbjct: 29 GSNSWDGHRG-------SHTTPLPRMEFTTFQGENPRSWIRICRKYFKLHLIPVNQWVEI 81
Query: 91 AMMYMNDRADVWAQGLLMQKPSIV 20
MY+ R +VW +GL+ +V
Sbjct: 82 TSMYLEGRVEVWFEGLMASNGEMV 105
>gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1
Query: 295 AVPAGASLGLSSTEGSRGT-SEQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFN 119
+VP G G +S+ G+R EQ F N R PKLDF FDG P+SW +CE YF ++
Sbjct: 853 SVPHGVEFGANSSRGNRDLHGEQGF---NHRLPKLDFPQFDGSDPQSWRMRCEHYFGVYG 909
Query: 118 IEGNQRVEIAMMYMNDRADVW 56
N V IA +Y RA W
Sbjct: 910 THPNLWVRIATIYFMGRAASW 930
>ref|XP_002333429.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -1
Query: 241 TSEQSFHSG-NVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRA 65
T ++ SG ++ P+++ F G+ PR W+RKC+KYF I +I +Q +E+ Y+ +A
Sbjct: 2 TGQEFLKSGFHIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKA 61
Query: 64 DVWAQGLLMQKPSIV 20
DVW +GL+ S++
Sbjct: 62 DVWFEGLVRGSDSLI 76
>ref|XP_002332257.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = -1
Query: 241 TSEQSFHSG-NVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRA 65
T ++ SG ++ P+++ F G+ PR W+RKC+KYF I +I +Q +E+ Y+ +A
Sbjct: 2 TGQEFLKSGFHIPLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKA 61
Query: 64 DVWAQGLLMQKPSIV 20
DVW +GL+ S++
Sbjct: 62 DVWFEGLVRGSDSLI 76
>ref|XP_002336774.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = -1
Query: 298 NAVPAGASLGLSSTEGSRGTSEQSFHSG--NVRFPKLDFLVFDGKKPRSWVRKCEKYFAI 125
NA + GL + + Q FH ++ P+++ F G+ PR W+RKC+KYF I
Sbjct: 8 NASTEKITPGLKTQSRGEQMTGQEFHKSRFHIPLPRMELSTFRGEDPRGWLRKCKKYFRI 67
Query: 124 FNIEGNQRVEIAMMYMNDRADVWAQGLLMQKPSIV 20
+I +Q VE+ Y+ +ADVW +G + S++
Sbjct: 68 HSIPVHQWVEMVSYYLEGKADVWFEGFVRGNESLI 102
>ref|XP_002330315.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = -1
Query: 214 NVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRADVWAQGLLMQ 35
N+ P+++ F G+ PR W+RKC KYF + I +Q VE+ Y+ +AD+W +GL+ +
Sbjct: 123 NIPLPRVELPTFRGENPRGWLRKCRKYFKMNTIPAHQWVEVVSYYLKGKADIWFEGLIRE 182
Query: 34 KPS 26
S
Sbjct: 183 NES 185
>gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -1
Query: 295 AVPAGASLGLSSTEGSRGT-SEQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFN 119
+VP G G +S+ G+R EQ F N R PKLDF FDG P+ W +CE YF ++
Sbjct: 153 SVPHGIEFGANSSRGNRDLHGEQGF---NHRLPKLDFPQFDGSDPQGWRLRCEHYFGVYG 209
Query: 118 IEGNQRVEIAMMYMNDRADVW 56
N V +A +Y RA W
Sbjct: 210 THPNLWVWVATIYFMGRAASW 230
>ref|XP_004234735.1| PREDICTED: enzymatic polyprotein-like [Solanum lycopersicum]
Length = 817
Score = 60.5 bits (145), Expect = 2e-07
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = -1
Query: 211 VRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRADVWAQGL 44
V P + F ++P+ W+RKCE+YF + ++ QRVE+A +Y+ND A+VW Q +
Sbjct: 82 VALPMWELPCFASQEPKVWIRKCERYFIQYRVDNEQRVELAALYLNDVAEVWYQSM 137
>gb|AAT78770.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108709720|gb|ABF97515.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 748
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -1
Query: 262 STEGSRGTS--EQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIA 89
S EG+ GT E+SF N R PKLDF +FDG P+ W KCE YF + + N V IA
Sbjct: 188 SGEGNFGTQFWEKSF---NHRMPKLDFPIFDGSDPQDWRMKCEHYFDVCDTSPNPWVRIA 244
Query: 88 MMYMNDRADVW 56
+Y RA W
Sbjct: 245 TIYFRGRAASW 255
>ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea mays]
gi|223943397|gb|ACN25782.1| unknown [Zea mays]
Length = 725
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = -1
Query: 253 GSRGTSEQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMN 74
GSR + S + PKL F +FDG PR W+ +CE YF ++ +E V++A MY+
Sbjct: 155 GSRTRNSDMPMSSLGKLPKLPFPIFDGDNPRLWIYRCESYFDMYEVEPEAWVKVASMYLA 214
Query: 73 DRADVWAQGLLMQKPSI 23
W Q + ++P +
Sbjct: 215 PHVACWFQSVERKQPRL 231
>ref|XP_002337925.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Frame = -1
Query: 421 QNNEHRFKSLTSIVRNISRDREQELPGNSKRPQ----LNAESSARNAVPAGASL-GLSST 257
+N E K L V+ + ++ ++ L + Q L + S P SL G+ S
Sbjct: 8 KNVEEHCKKLEERVQILQQEFQESLADQQTKWQEQFDLGSTSKGILQTPTRDSLEGMLSR 67
Query: 256 EGSRGTSEQSFHSG------NVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVE 95
E +Q++ NV P++D F G PR W+R+C K+F + + VE
Sbjct: 68 EKGPAKGDQTYGQEQQRMVHNVVLPRMDLTTFWGDNPRGWLRRCNKFFKLNTTPFQRWVE 127
Query: 94 IAMMYMNDRADVWAQGLLMQKPSIV*KE 11
+A +Y+ +A++W +G + +V +E
Sbjct: 128 LASLYLEGKAEIWFEGYMCGVEGVVDEE 155
>ref|XP_002337260.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = -1
Query: 214 NVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRADVWAQGLL 41
N FP++D F G PR W+R+C K+F + Q VEIA +Y+ +A++W +G +
Sbjct: 100 NTGFPRMDLTTFRGDNPRGWLRRCNKFFKLNATPWQQWVEIASLYLEGKAEIWFEGYM 157
>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
Length = 1274
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Frame = -1
Query: 409 HRFKSLTSIVRNISRDREQELPGNSKRPQLNAESSARNAVPAGASLGLSSTEGSRGTS-- 236
H + L V+ + Q+ + Q+ AE S + G S G S T G+S
Sbjct: 8 HDQRRLEESVQQLQEASNQQAMELKEFSQMMAEISLKLDQMMGTS-GASGTRSEGGSSIP 66
Query: 235 -------EQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYM 77
++ +RF KL+F F+G+ P WV KCE++F +E + V +A +++
Sbjct: 67 IKPRTGSNPGMYNSQMRFSKLNFPTFEGENPSGWVYKCERFFKYNGVEESDMVGLATIHL 126
Query: 76 NDRADVWAQG 47
+A W QG
Sbjct: 127 EGKALEWFQG 136
>ref|XP_002337435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = -1
Query: 313 ESSARNAVPAGASLGLSSTEGSRGTS-EQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEK 137
++ AR+ + S G +G + EQ NV P++D F G PR W+R+C+K
Sbjct: 15 QTPARDNLEGMLSRGKGPAKGDQTYGQEQQRMVHNVVLPRMDLTTFWGDNPRGWLRRCKK 74
Query: 136 YFAIFNIEGNQRVEIAMMYMNDRADVWAQGLLMQKPSIV 20
+F + + VE+A +Y+ +A++W +G + +V
Sbjct: 75 FFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGVV 113
>gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = -1
Query: 328 PQLNAESSARNAVPAGASLGLSSTEGSRGTSEQSF----HSGNVRFPKLDFLVFDGKKPR 161
P + S+++ +PA RGT + F H + PK+DF FDG+ P+
Sbjct: 111 PPVKGAYSSQSIIPASPRGDSGPEAERRGTQDNPFVPFAHHAHWALPKMDFPSFDGENPQ 170
Query: 160 SWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRADVWAQ 50
W KCEKYF ++ + + V +A + A W Q
Sbjct: 171 FWKTKCEKYFDVYGVAPDLWVRLATLNFTGTAARWLQ 207
>ref|XP_002337880.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -1
Query: 313 ESSARNAVPAGASLGLSSTEGSRGTS-EQSFHSGNVRFPKLDFLVFDGKKPRSWVRKCEK 137
++ AR+ + S G +G + EQ NV P++D F G PR W+R+C+K
Sbjct: 15 QTPARDNLEGMLSRGKGPAKGDQTYGQEQQRMVHNVVLPRMDLTTFWGDNPRGWLRRCKK 74
Query: 136 YFAIFNIEGNQRVEIAMMYMNDRADVWAQGLL 41
+F + + VE+A +Y+ +A++W +G +
Sbjct: 75 FFKLNTTPFQRWVELASLYLEGKAEIWFEGYM 106
>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
gi|223545812|gb|EEF47316.1| conserved hypothetical
protein [Ricinus communis]
Length = 171
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -1
Query: 202 PKLDFLVFDGKKPRSWVRKCEKYFAIFNIEGNQRVEIAMMYMNDRADVWAQGLLMQKPSI 23
PKL F FDG R W++KC KYF I Q+V++A + M D+A+ W L+ + ++
Sbjct: 33 PKLKFPKFDGSNLRQWIKKCCKYFVFCKIPDKQKVDLASLNMVDKAENWVSSYLINRTAV 92