BLASTX nr result
ID: Rheum21_contig00029267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00029267
(429 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003619014.1| Cytochrome c oxidase subunit [Medicago trunc... 83 6e-18
gb|EMT07695.1| Cytochrome c oxidase subunit 3 [Aegilops tauschii] 79 6e-13
gb|EMS65209.1| Cytochrome c oxidase subunit 3 [Triticum urartu] 76 5e-12
ref|YP_514631.1| cytochrome c oxidase subunit 3 [Oryza sativa In... 76 5e-12
tpg|DAA49720.1| TPA: putative cytochrome C oxidase subunit III f... 76 5e-12
ref|YP_002000549.1| cytochrome c oxidase subunit 3 [Oryza sativa... 76 5e-12
ref|YP_003433851.1| cytochrome c oxidase subunit 3 [Oryza rufipo... 76 5e-12
gb|EPS74623.1| hypothetical protein M569_00102, partial [Genlise... 65 9e-09
gb|AFB35111.1| cytochrome c oxidase subunit 3, partial (mitochon... 62 8e-08
>ref|XP_003619014.1| Cytochrome c oxidase subunit [Medicago truncatula]
gi|355494029|gb|AES75232.1| Cytochrome c oxidase subunit
[Medicago truncatula]
Length = 276
Score = 83.2 bits (204), Expect(2) = 6e-18
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -2
Query: 119 GWG*GGGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
G G GGGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 54 GGGRGGGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 92
Score = 33.1 bits (74), Expect(2) = 6e-18
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 148 PKEPFFTTLGGGG 110
PKEPFFTTLGGGG
Sbjct: 43 PKEPFFTTLGGGG 55
>gb|EMT07695.1| Cytochrome c oxidase subunit 3 [Aegilops tauschii]
Length = 598
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/42 (88%), Positives = 37/42 (88%), Gaps = 2/42 (4%)
Frame = -2
Query: 122 RGWG*G--GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
R WG G GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 108 RVWGMGVKGGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 149
>gb|EMS65209.1| Cytochrome c oxidase subunit 3 [Triticum urartu]
Length = 235
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 104 GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 5 GGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 38
>ref|YP_514631.1| cytochrome c oxidase subunit 3 [Oryza sativa Indica Group]
gi|74100120|gb|AAZ99284.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Indica Group]
gi|345286324|gb|AEN79474.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza rufipogon x Oryza sativa]
gi|345286326|gb|AEN79475.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza rufipogon]
gi|353685228|gb|AER12991.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Indica Group]
gi|353685295|gb|AER13057.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Indica Group]
gi|374277639|gb|AEZ03745.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Indica Group]
gi|374277683|gb|AEZ03788.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Indica Group]
gi|413954231|gb|AFW86880.1| putative cytochrome C
oxidase subunit III family protein [Zea mays]
gi|413954264|gb|AFW86913.1| putative cytochrome C
oxidase subunit III family protein [Zea mays]
Length = 280
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 104 GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 5 GGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 38
>tpg|DAA49720.1| TPA: putative cytochrome C oxidase subunit III family protein [Zea
mays]
Length = 150
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 104 GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 5 GGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 38
>ref|YP_002000549.1| cytochrome c oxidase subunit 3 [Oryza sativa Japonica Group]
gi|60498734|dbj|BAC19853.2| Cytochrome c oxidase subunit
3 [Oryza sativa Japonica Group]
Length = 280
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 104 GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 5 GGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 38
>ref|YP_003433851.1| cytochrome c oxidase subunit 3 [Oryza rufipogon]
gi|74100175|gb|AAZ99338.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Japonica Group]
gi|74100229|gb|AAZ99391.1| cytochrome c oxidase subunit
3 (mitochondrion) [Oryza sativa Japonica Group]
gi|285026122|dbj|BAI67955.1| cytochrome c oxidase
subunit 3 [Oryza rufipogon] gi|285026151|dbj|BAI67983.1|
cytochrome c oxidase subunit 3 [Oryza sativa Indica
Group] gi|345286322|gb|AEN79473.1| cytochrome c oxidase
subunit 3 (mitochondrion) [Oryza rufipogon x Oryza
sativa] gi|472833585|gb|AGI48809.1| cytochrome c oxidase
subunit 3 (mitochondrion) [Lolium perenne]
gi|473942299|gb|EMS50389.1| Cytochrome c oxidase subunit
3 [Triticum urartu]
Length = 280
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 104 GGLHTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
GGLHTT AKWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 5 GGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSL 38
>gb|EPS74623.1| hypothetical protein M569_00102, partial [Genlisea aurea]
Length = 369
Score = 65.1 bits (157), Expect = 9e-09
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -2
Query: 95 HTTEAKWFMIESQRHSYHLVDPSPWPISGSL 3
H + AKWFMIESQRHS+HLVDPSPWPISGSL
Sbjct: 169 HPSSAKWFMIESQRHSFHLVDPSPWPISGSL 199
>gb|AFB35111.1| cytochrome c oxidase subunit 3, partial (mitochondrion) [Manfreda
virginica]
Length = 182
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 80 KWFMIESQRHSYHLVDPSPWPISGSL 3
KWFMIESQRHSYHLVDPSPWPISGSL
Sbjct: 1 KWFMIESQRHSYHLVDPSPWPISGSL 26