BLASTX nr result

ID: Rheum21_contig00028990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028990
         (400 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40035.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_006492901.1| PREDICTED: putative vacuolar protein sorting...    67   2e-09
ref|XP_006492899.1| PREDICTED: putative vacuolar protein sorting...    67   2e-09
ref|XP_002518393.1| vacuolar protein sorting-associated protein,...    63   5e-08
ref|XP_004139161.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   8e-08
ref|XP_004305785.1| PREDICTED: uncharacterized protein LOC101298...    62   1e-07
ref|XP_006429807.1| hypothetical protein CICLE_v100108862mg, par...    58   1e-06
gb|EOX92839.1| Vacuolar protein sorting-associated protein 13A, ...    58   1e-06

>emb|CBI40035.3| unnamed protein product [Vitis vinifera]
          Length = 2796

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/109 (33%), Positives = 62/109 (56%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           S+K+ML+PLE+                 +S      R+L SL+GI ++ SR+ SKAEY+ 
Sbjct: 255 SIKVMLEPLEVTCDPDIFLNFMEFYNMFKSFDFHHKRVLLSLNGIENVKSRLLSKAEYIL 314

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKSI 329
            S ++V WD++F NI + +P +  D+  CS+V+ +     +S +D+ S+
Sbjct: 315 SSHKKVSWDVSFNNIIISLPWTNADLEPCSMVLESGSLFFTSKHDLSSL 363


>ref|XP_006492901.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13B-like isoform X3 [Citrus sinensis]
          Length = 3538

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/119 (31%), Positives = 61/119 (51%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           +VK+M+QPLE                 L+S      R+L SL+GI D+ +R+ SK  YL 
Sbjct: 585 AVKVMVQPLEAICDSEFFLNIMDFLTVLKSFKSLPERVLLSLNGIEDVKARLLSKVRYLL 644

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKSITKELLSKSAI 359
            +R++V+WD + T +++++P   + M  C+LV+      I S  D  S    +  +S I
Sbjct: 645 SNRKKVIWDFSITTVTIKVPWRNMIMEECNLVLALGSLLIKSKSDQDSFASNMDEQSYI 703


>ref|XP_006492899.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13B-like isoform X1 [Citrus sinensis]
          Length = 2649

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/119 (31%), Positives = 61/119 (51%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           +VK+M+QPLE                 L+S      R+L SL+GI D+ +R+ SK  YL 
Sbjct: 585 AVKVMVQPLEAICDSEFFLNIMDFLTVLKSFKSLPERVLLSLNGIEDVKARLLSKVRYLL 644

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKSITKELLSKSAI 359
            +R++V+WD + T +++++P   + M  C+LV+      I S  D  S    +  +S I
Sbjct: 645 SNRKKVIWDFSITTVTIKVPWRNMIMEECNLVLALGSLLIKSKSDQDSFASNMDEQSYI 703


>ref|XP_002518393.1| vacuolar protein sorting-associated protein, putative [Ricinus
           communis] gi|223542238|gb|EEF43780.1| vacuolar protein
           sorting-associated protein, putative [Ricinus communis]
          Length = 3482

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/119 (29%), Positives = 60/119 (50%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           SVK+MLQPLE+                L+S+  QQ R+L S +   D+ +R+ SK+EY  
Sbjct: 592 SVKVMLQPLEVSYDVEFFLNFMEFFNVLKSIEFQQKRVLWSFNEFKDVKTRLLSKSEYTL 651

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKSITKELLSKSAI 359
            S+ ++ WD++  NI + IP         +LV+       +S +  +S+  ++  +S I
Sbjct: 652 SSQTKLSWDVSILNIIINIPGRDAISGKYNLVLELGSLVYTSKHGAESVVAKIQEQSHI 710


>ref|XP_004139161.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101204937 [Cucumis sativus]
          Length = 3451

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/128 (28%), Positives = 64/128 (50%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           SVK+ML PL +               +L+S      R+L +L+GI +  +R+ SKA+ + 
Sbjct: 569 SVKVMLNPLVVTYDSKFFLCLSEFFDELKSFESLHRRVLSTLNGIENSKARLLSKAQCIM 628

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKSITKELLSKSAIS 362
              ++VMWD+    I++ +P  T      SLV++ A   ++S YD  S+T     +S + 
Sbjct: 629 SGYKKVMWDITVNGITVHVPWRTPSQ-QNSLVLQVATLCVTSKYDWSSLTSRFKEQSVML 687

Query: 363 DRCLNTNV 386
            R  + N+
Sbjct: 688 KRLSDPNL 695


>ref|XP_004305785.1| PREDICTED: uncharacterized protein LOC101298156 [Fragaria vesca
           subsp. vesca]
          Length = 3410

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 55/108 (50%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           S+K MLQPLE+                L+++  Q  R+L SL+GI ++  R+ SKAEY+ 
Sbjct: 626 SIKGMLQPLEVTIDAEFFLKLMDFLGALKTIESQHGRVLMSLNGIENVNGRLLSKAEYIL 685

Query: 183 LSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAGFRISSCYDIKS 326
              R+V+WD+   NI + +P         +LV+ A      +  D++S
Sbjct: 686 SRHRKVVWDVTIFNIVINVPWRDSTSDPHNLVLEAGSLLFRTKCDLRS 733


>ref|XP_006429807.1| hypothetical protein CICLE_v100108862mg, partial [Citrus
           clementina] gi|557531864|gb|ESR43047.1| hypothetical
           protein CICLE_v100108862mg, partial [Citrus clementina]
          Length = 2929

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/89 (32%), Positives = 50/89 (56%)
 Frame = +3

Query: 114 ILKSLSGISDIMSRISSKAEYLSLSRRRVMWDLNFTNISMRIPSSTLDMVACSLVIRAAG 293
           +L SL+GI D+ +R+ SK  YL  +R++V+WD + T +++++P   + M  C+LV+    
Sbjct: 1   VLLSLNGIEDVKARLLSKVGYLLSNRKKVIWDFSITTVTIKVPWRNMIMEECNLVLALGS 60

Query: 294 FRISSCYDIKSITKELLSKSAISDRCLNT 380
             I S  D  S    +  +S I    LN+
Sbjct: 61  LLIKSKSDQDSFASNMDEQSYILKDLLNS 89


>gb|EOX92839.1| Vacuolar protein sorting-associated protein 13A, putative
           [Theobroma cacao]
          Length = 3505

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = +3

Query: 3   SVKIMLQPLEIDXXXXXXXXXXXXXXDLESVSLQQNRILKSLSGISDIMSRISSKAEYLS 182
           SV +MLQ LE+                ++S   Q  R+L SL+GI D  SR+ +KAEY+ 
Sbjct: 583 SVNVMLQSLEVAYETTFFRDVTEFFTVVKSFEFQHERVLSSLNGIEDAKSRLLAKAEYIL 642

Query: 183 LSRRRVMWDLNFTNISMRIP 242
            + ++V W+++ TNI + IP
Sbjct: 643 SAHKKVTWNVSITNIMINIP 662


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