BLASTX nr result

ID: Rheum21_contig00028929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00028929
         (1031 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp....   101   5e-19
ref|XP_006393591.1| hypothetical protein EUTSA_v10012301mg, part...    89   2e-15
ref|XP_006395909.1| hypothetical protein EUTSA_v10005609mg, part...    86   2e-14
emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]    77   8e-12
emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]    68   7e-09
ref|XP_006405111.1| hypothetical protein EUTSA_v10000685mg [Eutr...    66   2e-08
gb|ACQ44233.1| hypothetical protein [Arabis alpina]                    57   9e-06

>ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329626|gb|EFH60045.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score =  101 bits (251), Expect = 5e-19
 Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   KSFFIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIYP-EQVKIALDYFCKHCFW 178
           ++  +R F+HS F  FD  CP+Q+P  F+  W  FGP  EIYP + +K    ++ KH   
Sbjct: 92  RTLCLRAFDHSWFLSFDSRCPNQVPGWFHEWWYWFGPTNEIYPTDIIKTNFPFYSKHLPK 151

Query: 179 QEY--VKPVQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYKVRWWEKFDLDLVTLDK 352
           Q+    K + FH + G+ WI  W Y+L  +LP  +P SL R Y+++WW+K+DL+  +L  
Sbjct: 152 QDIDSFKNISFHIDMGIPWICSWHYNLILLLPG-MPYSLVREYRIKWWDKYDLNRCSLTN 210

Query: 353 IKTLIQSKRTSQAPQKA 403
           I  L Q    ++A  +A
Sbjct: 211 IAKLFQITSQTKAQVQA 227


>ref|XP_006393591.1| hypothetical protein EUTSA_v10012301mg, partial [Eutrema
           salsugineum] gi|557090169|gb|ESQ30877.1| hypothetical
           protein EUTSA_v10012301mg, partial [Eutrema salsugineum]
          Length = 241

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 8/145 (5%)
 Frame = +2

Query: 8   FFIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIYPEQV-KIALDYFCKHCFWQE 184
           F+++ ++HS F   D +CP  IP LFY  W+ FGP  +I+P ++ K +L ++ K+     
Sbjct: 10  FYLKAYDHSWFISLDHKCPKTIPGLFYEWWHWFGPTDQIHPTEITKTSLPFYTKYAPKTP 69

Query: 185 Y--VKPVQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYKVRWWEKFDLDLVTLDKIK 358
              +  + FH + G+ WI  W Y+L   LP  +P SL R + ++WW+K++LD  +L  I+
Sbjct: 70  ILPLTNIHFHIDMGIPWICSWPYNLIPHLP-DMPYSLVREFCIKWWDKYNLDRCSLANIQ 128

Query: 359 TLIQSKR----TSQAPQKA-PIVHP 418
              Q  +    T +A  K+ P+V P
Sbjct: 129 KFFQITKEVATTVRAVSKSVPLVTP 153


>ref|XP_006395909.1| hypothetical protein EUTSA_v10005609mg, partial [Eutrema
           salsugineum] gi|557092548|gb|ESQ33195.1| hypothetical
           protein EUTSA_v10005609mg, partial [Eutrema salsugineum]
          Length = 341

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
 Frame = +2

Query: 11  FIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIY-PEQVKIALDYFCKHCFWQEY 187
           ++RP++HS F  FD+     +P  F   W+ FGP+ +IY PE +K +  ++ KH      
Sbjct: 102 YLRPYDHSWFLSFDQRFNKHVPGWFNEWWHWFGPIDQIYPPEIIKTSYPFYTKHLPNTNP 161

Query: 188 VKP---VQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYKVRWWEKFDLDLVTLDKIK 358
           + P   + FH + G+ WI  W ++L   LP  +P SL + ++V+WW+K++++  +L  IK
Sbjct: 162 IGPLNKIYFHADMGIPWICSWHFNLVLALP-NMPYSLVKEFRVKWWDKYNIERCSLTNIK 220

Query: 359 TLIQSKR 379
            L  + +
Sbjct: 221 KLFDANK 227


>emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]
          Length = 419

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
 Frame = +2

Query: 8   FFIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIYPEQVKIALDYFCKHCFWQEY 187
           F+++ + HS F  F + C  + P  F   W  FG +  I+P +++   +++      Q  
Sbjct: 208 FYLQSYQHSWFIQFSRSCNTKFPAWFQKWWTFFGLLDSIFPPEIQEKFNFYKSKTSSQNI 267

Query: 188 VKP--VQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYKVRWWEKFDLDLVTLDKIKT 361
            +P  + F     + WI  W     Q  P P PLSL R + ++WW+KF+ D V   K+  
Sbjct: 268 NQPRLLTFCSRLRIPWILTWNIIKKQEQPLPFPLSLSREFSIKWWDKFNHDFVCQQKVLQ 327

Query: 362 LIQSKRTS 385
           LI ++ +S
Sbjct: 328 LISTRPSS 335


>emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]
          Length = 395

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
 Frame = +2

Query: 8   FFIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIYPEQVKIALDYFCKHCFWQEY 187
           F+++ + HS F  F +    +    F   W  FG +  I+P  ++   +++      Q  
Sbjct: 221 FYLQSYQHSWFIQFSRNXNTKFXAWFKKWWTFFGLLDSIFPPDIQEKFNFYKSKTSSQNI 280

Query: 188 VKP--VQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYKVRWWEKFDLDLVTLDKIKT 361
            +P  + F     + WIF W     Q  P P PLSL R + ++W +KF+ D V   K+  
Sbjct: 281 TQPRLLTFCSRLRIPWIFXWNIIKKQEQPLPFPLSLSREFNIKWXDKFNHDFVCQQKVLQ 340

Query: 362 LI----------QSKRTSQAP 394
           LI           S R+SQ P
Sbjct: 341 LISTRPGSSNSKDSSRSSQGP 361


>ref|XP_006405111.1| hypothetical protein EUTSA_v10000685mg [Eutrema salsugineum]
           gi|557106239|gb|ESQ46564.1| hypothetical protein
           EUTSA_v10000685mg [Eutrema salsugineum]
          Length = 242

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
 Frame = +2

Query: 5   SFFIRPFNHSGFFFFDKECPDQIPILFYS*WNLFGPVPEIYPEQV-KIALDYFCKHCFWQ 181
           +F++R +++S F  FD  C   IP  FY  W+ F P  EIY  Q+ K++L Y+ KH    
Sbjct: 86  TFYLRTYDNSWFLSFDFHCSKSIPGWFYEWWHWFRPCEEIYQTQILKVSLPYYTKH-EKP 144

Query: 182 EYVKP---VQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYK 304
           E + P   + FH + GV WI  W ++L   LP  +  SL R Y+
Sbjct: 145 EAICPLPKISFHIDMGVPWILSWHFNLILFLP-DMQYSLVREYR 187


>gb|ACQ44233.1| hypothetical protein [Arabis alpina]
          Length = 373

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
 Frame = +2

Query: 131 EQVKIALDYFCKHCFWQEY--VKPVQFHKNTGVAWIFCWIYDL*QILPAPLPLSLCRLYK 304
           E +K +L ++ KH   Q+      + FH   G+ WI  W ++L  +LP  +P SL + Y+
Sbjct: 226 EIIKTSLPFYSKHVTKQDVGPFTTIAFHIEMGLPWICSWHFNLDIVLPG-MPFSLIKEYR 284

Query: 305 VRWWEKFDLDLVTLDKI----KTLIQSKRTSQAPQKA-PIVHP 418
           V+WW+K++LD  ++  I    + L Q++   Q+  K+ P++ P
Sbjct: 285 VKWWDKYNLDRCSISNIAKHFQILSQTQTAIQSVSKSIPLLTP 327


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